Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GS5:A4:A20
Extra
PDB:
ATOM 1 O3' C A 3 28.278 19.965 54.001 1.00 67.86 O
ATOM 2 P A A 4 27.990 18.859 55.122 1.00 68.22 P
ATOM 3 OP1 A A 4 26.793 18.068 54.733 1.00 64.83 O
ATOM 4 OP2 A A 4 28.036 19.524 56.443 1.00 66.00 O
ATOM 5 O5' A A 4 29.281 17.950 55.058 1.00 64.83 O
ATOM 6 C5' A A 4 29.480 17.025 54.006 1.00 63.23 C
ATOM 7 C4' A A 4 30.756 16.298 54.271 1.00 67.13 C
ATOM 8 O4' A A 4 31.830 17.262 54.181 1.00 67.16 O
ATOM 9 C3' A A 4 30.838 15.802 55.706 1.00 70.64 C
ATOM 10 O3' A A 4 30.197 14.536 55.874 1.00 72.51 O
ATOM 11 C2' A A 4 32.334 15.744 55.951 1.00 73.51 C
ATOM 12 O2' A A 4 32.926 14.534 55.519 1.00 81.59 O
ATOM 13 C1' A A 4 32.818 16.957 55.146 1.00 73.29 C
ATOM 14 N9 A A 4 33.033 18.147 55.964 1.00 71.86 N
ATOM 15 C8 A A 4 32.098 19.006 56.470 1.00 71.80 C
ATOM 16 N7 A A 4 32.605 19.965 57.206 1.00 71.81 N
ATOM 17 C5 A A 4 33.968 19.720 57.177 1.00 71.23 C
ATOM 18 C6 A A 4 35.062 20.373 57.773 1.00 72.70 C
ATOM 19 N6 A A 4 34.946 21.440 58.561 1.00 75.72 N
ATOM 20 N1 A A 4 36.295 19.880 57.531 1.00 72.85 N
ATOM 21 C2 A A 4 36.407 18.801 56.747 1.00 72.39 C
ATOM 22 N3 A A 4 35.457 18.096 56.140 1.00 71.02 N
ATOM 23 C4 A A 4 34.247 18.613 56.401 1.00 71.10 C
TER
ATOM 1 O3' G B 19 41.447 19.090 59.979 0.50 79.65 O
ATOM 2 P A B 20 42.000 20.073 58.832 1.00 81.49 P
ATOM 3 OP1 A B 20 43.057 20.925 59.422 1.00 83.73 O
ATOM 4 OP2 A B 20 40.851 20.704 58.132 1.00 80.69 O
ATOM 5 O5' A B 20 42.737 19.077 57.835 1.00 79.07 O
ATOM 6 C5' A B 20 43.811 18.276 58.307 1.00 77.34 C
ATOM 7 C4' A B 20 43.951 17.029 57.469 1.00 78.86 C
ATOM 8 O4' A B 20 42.815 16.155 57.692 1.00 78.19 O
ATOM 9 C3' A B 20 43.927 17.277 55.975 1.00 77.65 C
ATOM 10 O3' A B 20 45.214 17.636 55.523 1.00 79.09 O
ATOM 11 C2' A B 20 43.495 15.927 55.425 1.00 76.92 C
ATOM 12 O2' A B 20 44.575 15.018 55.372 1.00 75.71 O
ATOM 13 C1' A B 20 42.497 15.477 56.488 1.00 76.70 C
ATOM 14 N9 A B 20 41.103 15.758 56.162 1.00 76.33 N
ATOM 15 C8 A B 20 40.268 16.654 56.769 1.00 76.73 C
ATOM 16 N7 A B 20 39.043 16.632 56.306 1.00 74.43 N
ATOM 17 C5 A B 20 39.081 15.665 55.318 1.00 72.35 C
ATOM 18 C6 A B 20 38.096 15.151 54.465 1.00 70.82 C
ATOM 19 N6 A B 20 36.820 15.542 54.491 1.00 68.48 N
ATOM 20 N1 A B 20 38.469 14.202 53.580 1.00 71.52 N
ATOM 21 C2 A B 20 39.747 13.796 53.574 1.00 72.59 C
ATOM 22 N3 A B 20 40.757 14.193 54.336 1.00 73.89 N
ATOM 23 C4 A B 20 40.353 15.137 55.198 1.00 74.05 C
ATOM 24 P A B 21 45.400 18.999 54.710 1.00 80.28 P
ATOM 25 OP1 A B 21 46.847 19.299 54.689 1.00 84.63 O
ATOM 26 OP2 A B 21 44.443 19.994 55.268 1.00 83.50 O
ATOM 27 O5' A B 21 44.930 18.633 53.234 1.00 78.84 O
TER
ATOM 2 P A A 4 27.990 18.859 55.122 1.00 68.22 P
ATOM 3 OP1 A A 4 26.793 18.068 54.733 1.00 64.83 O
ATOM 4 OP2 A A 4 28.036 19.524 56.443 1.00 66.00 O
ATOM 5 O5' A A 4 29.281 17.950 55.058 1.00 64.83 O
ATOM 6 C5' A A 4 29.480 17.025 54.006 1.00 63.23 C
ATOM 7 C4' A A 4 30.756 16.298 54.271 1.00 67.13 C
ATOM 8 O4' A A 4 31.830 17.262 54.181 1.00 67.16 O
ATOM 9 C3' A A 4 30.838 15.802 55.706 1.00 70.64 C
ATOM 10 O3' A A 4 30.197 14.536 55.874 1.00 72.51 O
ATOM 11 C2' A A 4 32.334 15.744 55.951 1.00 73.51 C
ATOM 12 O2' A A 4 32.926 14.534 55.519 1.00 81.59 O
ATOM 13 C1' A A 4 32.818 16.957 55.146 1.00 73.29 C
ATOM 14 N9 A A 4 33.033 18.147 55.964 1.00 71.86 N
ATOM 15 C8 A A 4 32.098 19.006 56.470 1.00 71.80 C
ATOM 16 N7 A A 4 32.605 19.965 57.206 1.00 71.81 N
ATOM 17 C5 A A 4 33.968 19.720 57.177 1.00 71.23 C
ATOM 18 C6 A A 4 35.062 20.373 57.773 1.00 72.70 C
ATOM 19 N6 A A 4 34.946 21.440 58.561 1.00 75.72 N
ATOM 20 N1 A A 4 36.295 19.880 57.531 1.00 72.85 N
ATOM 21 C2 A A 4 36.407 18.801 56.747 1.00 72.39 C
ATOM 22 N3 A A 4 35.457 18.096 56.140 1.00 71.02 N
ATOM 23 C4 A A 4 34.247 18.613 56.401 1.00 71.10 C
TER
ATOM 1 O3' G B 19 41.447 19.090 59.979 0.50 79.65 O
ATOM 2 P A B 20 42.000 20.073 58.832 1.00 81.49 P
ATOM 3 OP1 A B 20 43.057 20.925 59.422 1.00 83.73 O
ATOM 4 OP2 A B 20 40.851 20.704 58.132 1.00 80.69 O
ATOM 5 O5' A B 20 42.737 19.077 57.835 1.00 79.07 O
ATOM 6 C5' A B 20 43.811 18.276 58.307 1.00 77.34 C
ATOM 7 C4' A B 20 43.951 17.029 57.469 1.00 78.86 C
ATOM 8 O4' A B 20 42.815 16.155 57.692 1.00 78.19 O
ATOM 9 C3' A B 20 43.927 17.277 55.975 1.00 77.65 C
ATOM 10 O3' A B 20 45.214 17.636 55.523 1.00 79.09 O
ATOM 11 C2' A B 20 43.495 15.927 55.425 1.00 76.92 C
ATOM 12 O2' A B 20 44.575 15.018 55.372 1.00 75.71 O
ATOM 13 C1' A B 20 42.497 15.477 56.488 1.00 76.70 C
ATOM 14 N9 A B 20 41.103 15.758 56.162 1.00 76.33 N
ATOM 15 C8 A B 20 40.268 16.654 56.769 1.00 76.73 C
ATOM 16 N7 A B 20 39.043 16.632 56.306 1.00 74.43 N
ATOM 17 C5 A B 20 39.081 15.665 55.318 1.00 72.35 C
ATOM 18 C6 A B 20 38.096 15.151 54.465 1.00 70.82 C
ATOM 19 N6 A B 20 36.820 15.542 54.491 1.00 68.48 N
ATOM 20 N1 A B 20 38.469 14.202 53.580 1.00 71.52 N
ATOM 21 C2 A B 20 39.747 13.796 53.574 1.00 72.59 C
ATOM 22 N3 A B 20 40.757 14.193 54.336 1.00 73.89 N
ATOM 23 C4 A B 20 40.353 15.137 55.198 1.00 74.05 C
ATOM 24 P A B 21 45.400 18.999 54.710 1.00 80.28 P
ATOM 25 OP1 A B 21 46.847 19.299 54.689 1.00 84.63 O
ATOM 26 OP2 A B 21 44.443 19.994 55.268 1.00 83.50 O
ATOM 27 O5' A B 21 44.930 18.633 53.234 1.00 78.84 O
TER
Atoms:
OP1: (26.793,18.068,54.733)
OP2: (28.036,19.524,56.443)
C3': (30.838,15.802,55.706)
C1': (32.818,16.957,55.146)
C5': (29.480,17.025,54.006)
O4': (31.830,17.262,54.181)
C8: (32.098,19.006,56.470)
O2': (32.926,14.534,55.519)
C6: (35.062,20.373,57.773)
C5: (33.968,19.720,57.177)
C4: (34.247,18.613,56.401)
P: (27.990,18.859,55.122)
C4': (30.756,16.298,54.271)
C2': (32.334,15.744,55.951)
C2: (36.407,18.801,56.747)
N1: (36.295,19.880,57.531)
N3: (35.457,18.096,56.140)
N6: (34.946,21.440,58.561)
N7: (32.605,19.965,57.206)
N9: (33.033,18.147,55.964)
O5': (29.281,17.950,55.058)
O3': (30.197,14.536,55.874)
OP2: (28.036,19.524,56.443)
C3': (30.838,15.802,55.706)
C1': (32.818,16.957,55.146)
C5': (29.480,17.025,54.006)
O4': (31.830,17.262,54.181)
C8: (32.098,19.006,56.470)
O2': (32.926,14.534,55.519)
C6: (35.062,20.373,57.773)
C5: (33.968,19.720,57.177)
C4: (34.247,18.613,56.401)
P: (27.990,18.859,55.122)
C4': (30.756,16.298,54.271)
C2': (32.334,15.744,55.951)
C2: (36.407,18.801,56.747)
N1: (36.295,19.880,57.531)
N3: (35.457,18.096,56.140)
N6: (34.946,21.440,58.561)
N7: (32.605,19.965,57.206)
N9: (33.033,18.147,55.964)
O5': (29.281,17.950,55.058)
O3': (30.197,14.536,55.874)
OP1: (43.057,20.925,59.422)
OP2: (40.851,20.704,58.132)
C3': (43.927,17.277,55.975)
C1': (42.497,15.477,56.488)
C5': (43.811,18.276,58.307)
O4': (42.815,16.155,57.692)
C8: (40.268,16.654,56.769)
O2': (44.575,15.018,55.372)
C6: (38.096,15.151,54.465)
C5: (39.081,15.665,55.318)
C4: (40.353,15.137,55.198)
P: (42.000,20.073,58.832)
C4': (43.951,17.029,57.469)
C2': (43.495,15.927,55.425)
C2: (39.747,13.796,53.574)
N1: (38.469,14.202,53.580)
N3: (40.757,14.193,54.336)
N6: (36.820,15.542,54.491)
N7: (39.043,16.632,56.306)
N9: (41.103,15.758,56.162)
O5': (42.737,19.077,57.835)
O3': (45.214,17.636,55.523)
OP2: (40.851,20.704,58.132)
C3': (43.927,17.277,55.975)
C1': (42.497,15.477,56.488)
C5': (43.811,18.276,58.307)
O4': (42.815,16.155,57.692)
C8: (40.268,16.654,56.769)
O2': (44.575,15.018,55.372)
C6: (38.096,15.151,54.465)
C5: (39.081,15.665,55.318)
C4: (40.353,15.137,55.198)
P: (42.000,20.073,58.832)
C4': (43.951,17.029,57.469)
C2': (43.495,15.927,55.425)
C2: (39.747,13.796,53.574)
N1: (38.469,14.202,53.580)
N3: (40.757,14.193,54.336)
N6: (36.820,15.542,54.491)
N7: (39.043,16.632,56.306)
N9: (41.103,15.758,56.162)
O5': (42.737,19.077,57.835)
O3': (45.214,17.636,55.523)
Image (generated by PyMOL):