ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A769:A743

Extra

PDB:
ATOM 1 O3' G A 768 47.253 -26.820 -3.053 1.00 42.55 O
ATOM 2 P A A 769 46.144 -26.080 -2.139 1.00 41.25 P
ATOM 3 OP1 A A 769 46.238 -24.620 -2.420 1.00 52.15 O
ATOM 4 OP2 A A 769 46.337 -26.551 -0.751 1.00 52.70 O
ATOM 5 O5' A A 769 44.777 -26.663 -2.708 1.00 53.49 O
ATOM 6 C5' A A 769 44.500 -26.671 -4.100 1.00 45.52 C
ATOM 7 C4' A A 769 43.508 -27.753 -4.473 1.00 45.60 C
ATOM 8 O4' A A 769 43.963 -29.028 -3.965 1.00 55.23 O
ATOM 9 C3' A A 769 42.093 -27.611 -3.914 1.00 45.74 C
ATOM 10 O3' A A 769 41.278 -26.727 -4.678 1.00 49.71 O
ATOM 11 C2' A A 769 41.584 -29.045 -3.931 1.00 44.34 C
ATOM 12 O2' A A 769 41.132 -29.393 -5.233 1.00 46.99 O
ATOM 13 C1' A A 769 42.858 -29.836 -3.622 1.00 50.10 C
ATOM 14 N9 A A 769 42.957 -30.170 -2.199 1.00 48.97 N
ATOM 15 C8 A A 769 43.548 -29.456 -1.180 1.00 57.70 C
ATOM 16 N7 A A 769 43.428 -30.027 0.001 1.00 59.79 N
ATOM 17 C5 A A 769 42.709 -31.182 -0.278 1.00 56.69 C
ATOM 18 C6 A A 769 42.246 -32.220 0.523 1.00 49.07 C
ATOM 19 N6 A A 769 42.458 -32.260 1.827 1.00 63.67 N
ATOM 20 N1 A A 769 41.564 -33.220 -0.040 1.00 38.51 N
ATOM 21 C2 A A 769 41.364 -33.173 -1.347 1.00 49.93 C
ATOM 22 N3 A A 769 41.741 -32.246 -2.226 1.00 63.05 N
ATOM 23 C4 A A 769 42.420 -31.275 -1.618 1.00 55.89 C
ATOM 24 P U A 770 40.510 -25.504 -3.961 1.00 51.27 P
ATOM 25 OP1 U A 770 41.413 -24.989 -2.912 1.00 50.51 O
ATOM 26 OP2 U A 770 39.142 -26.002 -3.564 1.00 51.76 O
ATOM 27 O5' U A 770 40.378 -24.427 -5.120 1.00 30.54 O
TER

ATOM 1 O3' A B 742 38.677 -38.501 0.952 1.00 40.11 O
ATOM 2 P A B 743 39.401 -39.082 -0.349 1.00 54.99 P
ATOM 3 OP1 A B 743 39.531 -40.558 -0.162 1.00 40.36 O
ATOM 4 OP2 A B 743 40.632 -38.268 -0.552 1.00 45.47 O
ATOM 5 O5' A B 743 38.361 -38.769 -1.518 1.00 47.86 O
ATOM 6 C5' A B 743 37.223 -39.583 -1.741 1.00 47.30 C
ATOM 7 C4' A B 743 36.315 -38.959 -2.764 1.00 47.41 C
ATOM 8 O4' A B 743 36.064 -37.575 -2.408 1.00 55.55 O
ATOM 9 C3' A B 743 36.879 -38.881 -4.165 1.00 44.90 C
ATOM 10 O3' A B 743 36.710 -40.077 -4.888 1.00 42.39 O
ATOM 11 C2' A B 743 36.162 -37.686 -4.776 1.00 47.15 C
ATOM 12 O2' A B 743 34.893 -38.051 -5.272 1.00 61.69 O
ATOM 13 C1' A B 743 35.971 -36.779 -3.570 1.00 48.75 C
ATOM 14 N9 A B 743 37.017 -35.769 -3.519 1.00 44.24 N
ATOM 15 C8 A B 743 37.947 -35.582 -2.559 1.00 51.07 C
ATOM 16 N7 A B 743 38.767 -34.617 -2.876 1.00 57.22 N
ATOM 17 C5 A B 743 38.345 -34.164 -4.108 1.00 45.53 C
ATOM 18 C6 A B 743 38.806 -33.154 -4.946 1.00 54.35 C
ATOM 19 N6 A B 743 39.852 -32.381 -4.662 1.00 63.82 N
ATOM 20 N1 A B 743 38.161 -32.955 -6.099 1.00 54.61 N
ATOM 21 C2 A B 743 37.114 -33.743 -6.347 1.00 56.04 C
ATOM 22 N3 A B 743 36.588 -34.730 -5.640 1.00 52.18 N
ATOM 23 C4 A B 743 37.269 -34.882 -4.515 1.00 47.07 C
ATOM 24 P C B 744 37.994 -40.946 -5.283 1.00 56.51 P
ATOM 25 OP1 C B 744 37.517 -42.154 -6.006 1.00 54.35 O
ATOM 26 OP2 C B 744 38.796 -41.114 -4.037 1.00 54.21 O
ATOM 27 O5' C B 744 38.745 -40.002 -6.295 1.00 45.97 O
TER

Atoms:
OP1: (46.238,-24.620,-2.420)
OP2: (46.337,-26.551,-0.751)
C3': (42.093,-27.611,-3.914)
C1': (42.858,-29.836,-3.622)
C5': (44.500,-26.671,-4.100)
O4': (43.963,-29.028,-3.965)
C8: (43.548,-29.456,-1.180)
O2': (41.132,-29.393,-5.233)
C6: (42.246,-32.220,0.523)
C5: (42.709,-31.182,-0.278)
C4: (42.420,-31.275,-1.618)
P: (46.144,-26.080,-2.139)
C4': (43.508,-27.753,-4.473)
C2': (41.584,-29.045,-3.931)
C2: (41.364,-33.173,-1.347)
N1: (41.564,-33.220,-0.040)
N3: (41.741,-32.246,-2.226)
N6: (42.458,-32.260,1.827)
N7: (43.428,-30.027,0.001)
N9: (42.957,-30.170,-2.199)
O5': (44.777,-26.663,-2.708)
O3': (41.278,-26.727,-4.678)
OP1: (39.531,-40.558,-0.162)
OP2: (40.632,-38.268,-0.552)
C3': (36.879,-38.881,-4.165)
C1': (35.971,-36.779,-3.570)
C5': (37.223,-39.583,-1.741)
O4': (36.064,-37.575,-2.408)
C8: (37.947,-35.582,-2.559)
O2': (34.893,-38.051,-5.272)
C6: (38.806,-33.154,-4.946)
C5: (38.345,-34.164,-4.108)
C4: (37.269,-34.882,-4.515)
P: (39.401,-39.082,-0.349)
C4': (36.315,-38.959,-2.764)
C2': (36.162,-37.686,-4.776)
C2: (37.114,-33.743,-6.347)
N1: (38.161,-32.955,-6.099)
N3: (36.588,-34.730,-5.640)
N6: (39.852,-32.381,-4.662)
N7: (38.767,-34.617,-2.876)
N9: (37.017,-35.769,-3.519)
O5': (38.361,-38.769,-1.518)
O3': (36.710,-40.077,-4.888)
Image (generated by PyMOL):
PyMOL image
show in jmol