Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0477:0491
Extra
PDB:
ATOM 1 O3' U A 476 23.187 168.719 58.215 1.00 69.94 O
ATOM 2 P A A 477 24.289 169.833 58.607 1.00 72.94 P
ATOM 3 OP1 A A 477 25.483 169.656 57.738 1.00 73.93 O
ATOM 4 OP2 A A 477 24.456 169.857 60.084 1.00 73.09 O
ATOM 5 O5' A A 477 23.598 171.206 58.181 1.00 74.36 O
ATOM 6 C5' A A 477 23.536 171.627 56.794 1.00 73.06 C
ATOM 7 C4' A A 477 22.280 172.440 56.550 1.00 72.27 C
ATOM 8 O4' A A 477 21.115 171.575 56.551 1.00 72.94 O
ATOM 9 C3' A A 477 21.959 173.490 57.599 1.00 71.37 C
ATOM 10 O3' A A 477 22.694 174.679 57.370 1.00 71.38 O
ATOM 11 C2' A A 477 20.462 173.700 57.416 1.00 71.90 C
ATOM 12 O2' A A 477 20.146 174.580 56.360 1.00 73.09 O
ATOM 13 C1' A A 477 19.995 172.288 57.054 1.00 72.71 C
ATOM 14 N9 A A 477 19.437 171.548 58.184 1.00 73.04 N
ATOM 15 C8 A A 477 19.917 170.412 58.785 1.00 73.60 C
ATOM 16 N7 A A 477 19.179 169.990 59.782 1.00 73.95 N
ATOM 17 C5 A A 477 18.145 170.912 59.843 1.00 73.64 C
ATOM 18 C6 A A 477 17.032 171.026 60.688 1.00 73.86 C
ATOM 19 N6 A A 477 16.758 170.168 61.670 1.00 75.02 N
ATOM 20 N1 A A 477 16.196 172.063 60.486 1.00 73.46 N
ATOM 21 C2 A A 477 16.468 172.919 59.498 1.00 73.78 C
ATOM 22 N3 A A 477 17.481 172.918 58.636 1.00 73.54 N
ATOM 23 C4 A A 477 18.292 171.876 58.865 1.00 73.50 C
ATOM 24 P C A 478 23.041 175.648 58.599 1.00 71.31 P
ATOM 25 OP1 C A 478 23.557 176.908 58.015 1.00 71.33 O
ATOM 26 OP2 C A 478 23.879 174.893 59.562 1.00 73.05 O
ATOM 27 O5' C A 478 21.630 175.931 59.284 1.00 71.14 O
TER
ATOM 1 O3' A B 490 12.969 168.312 69.787 1.00 70.92 O
ATOM 2 P G B 491 12.504 167.105 68.819 1.00 74.03 P
ATOM 3 OP1 G B 491 11.013 167.123 68.798 1.00 73.40 O
ATOM 4 OP2 G B 491 13.216 165.862 69.218 1.00 73.09 O
ATOM 5 O5' G B 491 13.026 167.520 67.370 1.00 72.36 O
ATOM 6 C5' G B 491 12.547 168.718 66.747 1.00 72.07 C
ATOM 7 C4' G B 491 13.370 169.063 65.527 1.00 71.88 C
ATOM 8 O4' G B 491 14.776 169.180 65.881 1.00 71.98 O
ATOM 9 C3' G B 491 13.388 168.076 64.373 1.00 71.63 C
ATOM 10 O3' G B 491 12.201 168.138 63.589 1.00 71.33 O
ATOM 11 C2' G B 491 14.604 168.572 63.598 1.00 72.68 C
ATOM 12 O2' G B 491 14.362 169.767 62.875 1.00 72.54 O
ATOM 13 C1' G B 491 15.572 168.880 64.742 1.00 72.09 C
ATOM 14 N9 G B 491 16.407 167.717 65.039 1.00 71.78 N
ATOM 15 C8 G B 491 16.300 166.867 66.111 1.00 72.05 C
ATOM 16 N7 G B 491 17.166 165.891 66.078 1.00 72.05 N
ATOM 17 C5 G B 491 17.896 166.115 64.920 1.00 71.55 C
ATOM 18 C6 G B 491 18.971 165.383 64.357 1.00 71.88 C
ATOM 19 O6 G B 491 19.510 164.352 64.783 1.00 73.35 O
ATOM 20 N1 G B 491 19.417 165.959 63.174 1.00 71.52 N
ATOM 21 C2 G B 491 18.897 167.092 62.602 1.00 70.90 C
ATOM 22 N2 G B 491 19.463 167.484 61.448 1.00 70.16 N
ATOM 23 N3 G B 491 17.897 167.785 63.118 1.00 70.45 N
ATOM 24 C4 G B 491 17.447 167.243 64.270 1.00 71.10 C
ATOM 25 P G B 492 11.736 166.857 62.731 1.00 70.98 P
ATOM 26 OP1 G B 492 10.354 167.150 62.271 1.00 73.29 O
ATOM 27 OP2 G B 492 11.995 165.622 63.504 1.00 71.66 O
ATOM 28 O5' G B 492 12.701 166.855 61.463 1.00 67.55 O
TER
ATOM 2 P A A 477 24.289 169.833 58.607 1.00 72.94 P
ATOM 3 OP1 A A 477 25.483 169.656 57.738 1.00 73.93 O
ATOM 4 OP2 A A 477 24.456 169.857 60.084 1.00 73.09 O
ATOM 5 O5' A A 477 23.598 171.206 58.181 1.00 74.36 O
ATOM 6 C5' A A 477 23.536 171.627 56.794 1.00 73.06 C
ATOM 7 C4' A A 477 22.280 172.440 56.550 1.00 72.27 C
ATOM 8 O4' A A 477 21.115 171.575 56.551 1.00 72.94 O
ATOM 9 C3' A A 477 21.959 173.490 57.599 1.00 71.37 C
ATOM 10 O3' A A 477 22.694 174.679 57.370 1.00 71.38 O
ATOM 11 C2' A A 477 20.462 173.700 57.416 1.00 71.90 C
ATOM 12 O2' A A 477 20.146 174.580 56.360 1.00 73.09 O
ATOM 13 C1' A A 477 19.995 172.288 57.054 1.00 72.71 C
ATOM 14 N9 A A 477 19.437 171.548 58.184 1.00 73.04 N
ATOM 15 C8 A A 477 19.917 170.412 58.785 1.00 73.60 C
ATOM 16 N7 A A 477 19.179 169.990 59.782 1.00 73.95 N
ATOM 17 C5 A A 477 18.145 170.912 59.843 1.00 73.64 C
ATOM 18 C6 A A 477 17.032 171.026 60.688 1.00 73.86 C
ATOM 19 N6 A A 477 16.758 170.168 61.670 1.00 75.02 N
ATOM 20 N1 A A 477 16.196 172.063 60.486 1.00 73.46 N
ATOM 21 C2 A A 477 16.468 172.919 59.498 1.00 73.78 C
ATOM 22 N3 A A 477 17.481 172.918 58.636 1.00 73.54 N
ATOM 23 C4 A A 477 18.292 171.876 58.865 1.00 73.50 C
ATOM 24 P C A 478 23.041 175.648 58.599 1.00 71.31 P
ATOM 25 OP1 C A 478 23.557 176.908 58.015 1.00 71.33 O
ATOM 26 OP2 C A 478 23.879 174.893 59.562 1.00 73.05 O
ATOM 27 O5' C A 478 21.630 175.931 59.284 1.00 71.14 O
TER
ATOM 1 O3' A B 490 12.969 168.312 69.787 1.00 70.92 O
ATOM 2 P G B 491 12.504 167.105 68.819 1.00 74.03 P
ATOM 3 OP1 G B 491 11.013 167.123 68.798 1.00 73.40 O
ATOM 4 OP2 G B 491 13.216 165.862 69.218 1.00 73.09 O
ATOM 5 O5' G B 491 13.026 167.520 67.370 1.00 72.36 O
ATOM 6 C5' G B 491 12.547 168.718 66.747 1.00 72.07 C
ATOM 7 C4' G B 491 13.370 169.063 65.527 1.00 71.88 C
ATOM 8 O4' G B 491 14.776 169.180 65.881 1.00 71.98 O
ATOM 9 C3' G B 491 13.388 168.076 64.373 1.00 71.63 C
ATOM 10 O3' G B 491 12.201 168.138 63.589 1.00 71.33 O
ATOM 11 C2' G B 491 14.604 168.572 63.598 1.00 72.68 C
ATOM 12 O2' G B 491 14.362 169.767 62.875 1.00 72.54 O
ATOM 13 C1' G B 491 15.572 168.880 64.742 1.00 72.09 C
ATOM 14 N9 G B 491 16.407 167.717 65.039 1.00 71.78 N
ATOM 15 C8 G B 491 16.300 166.867 66.111 1.00 72.05 C
ATOM 16 N7 G B 491 17.166 165.891 66.078 1.00 72.05 N
ATOM 17 C5 G B 491 17.896 166.115 64.920 1.00 71.55 C
ATOM 18 C6 G B 491 18.971 165.383 64.357 1.00 71.88 C
ATOM 19 O6 G B 491 19.510 164.352 64.783 1.00 73.35 O
ATOM 20 N1 G B 491 19.417 165.959 63.174 1.00 71.52 N
ATOM 21 C2 G B 491 18.897 167.092 62.602 1.00 70.90 C
ATOM 22 N2 G B 491 19.463 167.484 61.448 1.00 70.16 N
ATOM 23 N3 G B 491 17.897 167.785 63.118 1.00 70.45 N
ATOM 24 C4 G B 491 17.447 167.243 64.270 1.00 71.10 C
ATOM 25 P G B 492 11.736 166.857 62.731 1.00 70.98 P
ATOM 26 OP1 G B 492 10.354 167.150 62.271 1.00 73.29 O
ATOM 27 OP2 G B 492 11.995 165.622 63.504 1.00 71.66 O
ATOM 28 O5' G B 492 12.701 166.855 61.463 1.00 67.55 O
TER
Atoms:
OP1: (25.483,169.656,57.738)
OP2: (24.456,169.857,60.084)
C3': (21.959,173.490,57.599)
C1': (19.995,172.288,57.054)
C5': (23.536,171.627,56.794)
O4': (21.115,171.575,56.551)
C8: (19.917,170.412,58.785)
O2': (20.146,174.580,56.360)
C6: (17.032,171.026,60.688)
C5: (18.145,170.912,59.843)
C4: (18.292,171.876,58.865)
P: (24.289,169.833,58.607)
C4': (22.280,172.440,56.550)
C2': (20.462,173.700,57.416)
C2: (16.468,172.919,59.498)
N1: (16.196,172.063,60.486)
N3: (17.481,172.918,58.636)
N6: (16.758,170.168,61.670)
N7: (19.179,169.990,59.782)
N9: (19.437,171.548,58.184)
O5': (23.598,171.206,58.181)
O3': (22.694,174.679,57.370)
OP2: (24.456,169.857,60.084)
C3': (21.959,173.490,57.599)
C1': (19.995,172.288,57.054)
C5': (23.536,171.627,56.794)
O4': (21.115,171.575,56.551)
C8: (19.917,170.412,58.785)
O2': (20.146,174.580,56.360)
C6: (17.032,171.026,60.688)
C5: (18.145,170.912,59.843)
C4: (18.292,171.876,58.865)
P: (24.289,169.833,58.607)
C4': (22.280,172.440,56.550)
C2': (20.462,173.700,57.416)
C2: (16.468,172.919,59.498)
N1: (16.196,172.063,60.486)
N3: (17.481,172.918,58.636)
N6: (16.758,170.168,61.670)
N7: (19.179,169.990,59.782)
N9: (19.437,171.548,58.184)
O5': (23.598,171.206,58.181)
O3': (22.694,174.679,57.370)
OP1: (11.013,167.123,68.798)
OP2: (13.216,165.862,69.218)
C3': (13.388,168.076,64.373)
C1': (15.572,168.880,64.742)
C5': (12.547,168.718,66.747)
O6: (19.510,164.352,64.783)
O4': (14.776,169.180,65.881)
C8: (16.300,166.867,66.111)
C2: (18.897,167.092,62.602)
C6: (18.971,165.383,64.357)
C5: (17.896,166.115,64.920)
C4: (17.447,167.243,64.270)
P: (12.504,167.105,68.819)
C4': (13.370,169.063,65.527)
C2': (14.604,168.572,63.598)
O2': (14.362,169.767,62.875)
N1: (19.417,165.959,63.174)
N2: (19.463,167.484,61.448)
N3: (17.897,167.785,63.118)
N7: (17.166,165.891,66.078)
N9: (16.407,167.717,65.039)
O5': (13.026,167.520,67.370)
O3': (12.201,168.138,63.589)
OP2: (13.216,165.862,69.218)
C3': (13.388,168.076,64.373)
C1': (15.572,168.880,64.742)
C5': (12.547,168.718,66.747)
O6: (19.510,164.352,64.783)
O4': (14.776,169.180,65.881)
C8: (16.300,166.867,66.111)
C2: (18.897,167.092,62.602)
C6: (18.971,165.383,64.357)
C5: (17.896,166.115,64.920)
C4: (17.447,167.243,64.270)
P: (12.504,167.105,68.819)
C4': (13.370,169.063,65.527)
C2': (14.604,168.572,63.598)
O2': (14.362,169.767,62.875)
N1: (19.417,165.959,63.174)
N2: (19.463,167.484,61.448)
N3: (17.897,167.785,63.118)
N7: (17.166,165.891,66.078)
N9: (16.407,167.717,65.039)
O5': (13.026,167.520,67.370)
O3': (12.201,168.138,63.589)
Image (generated by PyMOL):