ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXB:A70:A33

Extra

PDB:
ATOM 1 O3' C A 69 1.000 -58.746 9.787 1.00128.03 O
ATOM 2 P A A 70 2.450 -58.050 9.807 1.00125.66 P
ATOM 3 OP1 A A 70 3.450 -59.090 10.131 1.00127.68 O
ATOM 4 OP2 A A 70 2.403 -56.815 10.628 1.00122.71 O
ATOM 5 O5' A A 70 2.626 -57.657 8.267 1.00124.36 O
ATOM 6 C5' A A 70 3.607 -56.723 7.876 1.00120.22 C
ATOM 7 C4' A A 70 3.016 -55.645 6.985 1.00117.45 C
ATOM 8 O4' A A 70 1.634 -55.329 7.317 1.00116.30 O
ATOM 9 C3' A A 70 3.736 -54.322 7.127 1.00113.95 C
ATOM 10 O3' A A 70 4.901 -54.340 6.336 1.00113.38 O
ATOM 11 C2' A A 70 2.688 -53.337 6.632 1.00112.79 C
ATOM 12 O2' A A 70 2.572 -53.313 5.222 1.00113.90 O
ATOM 13 C1' A A 70 1.435 -53.921 7.285 1.00113.36 C
ATOM 14 N9 A A 70 1.204 -53.442 8.655 1.00111.05 N
ATOM 15 C8 A A 70 1.070 -54.227 9.766 1.00111.57 C
ATOM 16 N7 A A 70 0.878 -53.568 10.882 1.00109.66 N
ATOM 17 C5 A A 70 0.880 -52.246 10.484 1.00107.57 C
ATOM 18 C6 A A 70 0.722 -51.044 11.209 1.00105.23 C
ATOM 19 N6 A A 70 0.527 -51.017 12.529 1.00104.48 N
ATOM 20 N1 A A 70 0.776 -49.877 10.530 1.00103.87 N
ATOM 21 C2 A A 70 0.977 -49.923 9.204 1.00104.96 C
ATOM 22 N3 A A 70 1.140 -50.991 8.413 1.00107.04 N
ATOM 23 C4 A A 70 1.079 -52.141 9.115 1.00108.40 C
ATOM 24 P G A 71 6.305 -54.130 7.070 1.00111.65 P
ATOM 25 OP1 G A 71 7.379 -54.355 6.073 1.00112.75 O
ATOM 26 OP2 G A 71 6.301 -54.884 8.345 1.00111.92 O
ATOM 27 O5' G A 71 6.260 -52.580 7.440 1.00108.03 O
TER

ATOM 1 O3' A B 32 -0.972 -42.880 10.397 1.00103.01 O
ATOM 2 P A B 33 -0.327 -44.276 9.944 1.00104.96 P
ATOM 3 OP1 A B 33 -1.359 -45.325 10.103 1.00105.78 O
ATOM 4 OP2 A B 33 0.990 -44.416 10.604 1.00104.53 O
ATOM 5 O5' A B 33 -0.057 -44.067 8.380 1.00106.63 O
ATOM 6 C5' A B 33 0.000 -42.768 7.790 1.00107.65 C
ATOM 7 C4' A B 33 0.621 -42.807 6.404 1.00109.97 C
ATOM 8 O4' A B 33 1.895 -43.502 6.453 1.00110.93 O
ATOM 9 C3' A B 33 -0.163 -43.560 5.335 1.00112.13 C
ATOM 10 O3' A B 33 -1.179 -42.762 4.756 1.00112.83 O
ATOM 11 C2' A B 33 0.939 -43.872 4.338 1.00113.53 C
ATOM 12 O2' A B 33 1.336 -42.734 3.600 1.00113.78 O
ATOM 13 C1' A B 33 2.040 -44.315 5.298 1.00113.29 C
ATOM 14 N9 A B 33 1.917 -45.735 5.650 1.00115.08 N
ATOM 15 C8 A B 33 1.522 -46.273 6.849 1.00114.73 C
ATOM 16 N7 A B 33 1.494 -47.583 6.871 1.00116.10 N
ATOM 17 C5 A B 33 1.896 -47.939 5.595 1.00117.88 C
ATOM 18 C6 A B 33 2.076 -49.193 4.969 1.00120.15 C
ATOM 19 N6 A B 33 1.858 -50.358 5.587 1.00120.94 N
ATOM 20 N1 A B 33 2.488 -49.203 3.679 1.00121.70 N
ATOM 21 C2 A B 33 2.708 -48.032 3.058 1.00120.91 C
ATOM 22 N3 A B 33 2.574 -46.795 3.543 1.00118.69 N
ATOM 23 C4 A B 33 2.161 -46.815 4.826 1.00117.24 C
ATOM 24 P G B 34 -2.708 -43.221 4.903 1.00113.70 P
ATOM 25 OP1 G B 34 -3.533 -42.301 4.085 1.00114.28 O
ATOM 26 OP2 G B 34 -2.988 -43.360 6.352 1.00112.16 O
ATOM 27 O5' G B 34 -2.745 -44.684 4.239 1.00114.77 O
TER

Atoms:
OP1: (3.450,-59.090,10.131)
OP2: (2.403,-56.815,10.628)
C3': (3.736,-54.322,7.127)
C1': (1.435,-53.921,7.285)
C5': (3.607,-56.723,7.876)
O4': (1.634,-55.329,7.317)
C8: (1.070,-54.227,9.766)
O2': (2.572,-53.313,5.222)
C6: (0.722,-51.044,11.209)
C5: (0.880,-52.246,10.484)
C4: (1.079,-52.141,9.115)
P: (2.450,-58.050,9.807)
C4': (3.016,-55.645,6.985)
C2': (2.688,-53.337,6.632)
C2: (0.977,-49.923,9.204)
N1: (0.776,-49.877,10.530)
N3: (1.140,-50.991,8.413)
N6: (0.527,-51.017,12.529)
N7: (0.878,-53.568,10.882)
N9: (1.204,-53.442,8.655)
O5': (2.626,-57.657,8.267)
O3': (4.901,-54.340,6.336)
OP1: (-1.359,-45.325,10.103)
OP2: (0.990,-44.416,10.604)
C3': (-0.163,-43.560,5.335)
C1': (2.040,-44.315,5.298)
C5': (0.000,-42.768,7.790)
O4': (1.895,-43.502,6.453)
C8: (1.522,-46.273,6.849)
O2': (1.336,-42.734,3.600)
C6: (2.076,-49.193,4.969)
C5: (1.896,-47.939,5.595)
C4: (2.161,-46.815,4.826)
P: (-0.327,-44.276,9.944)
C4': (0.621,-42.807,6.404)
C2': (0.939,-43.872,4.338)
C2: (2.708,-48.032,3.058)
N1: (2.488,-49.203,3.679)
N3: (2.574,-46.795,3.543)
N6: (1.858,-50.358,5.587)
N7: (1.494,-47.583,6.871)
N9: (1.917,-45.735,5.650)
O5': (-0.057,-44.067,8.380)
O3': (-1.179,-42.762,4.756)
Image (generated by PyMOL):
PyMOL image
show in jmol