Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A139:A15
Extra
PDB:
ATOM 1 O3' U A 138 11.127 43.838 21.738 1.00 17.72 O
ATOM 2 P A A 139 10.023 42.840 22.325 1.00 22.21 P
ATOM 3 OP1 A A 139 8.801 43.306 21.612 1.00 20.18 O
ATOM 4 OP2 A A 139 10.123 42.830 23.810 1.00 21.10 O
ATOM 5 O5' A A 139 10.438 41.404 21.813 1.00 20.81 O
ATOM 6 C5' A A 139 10.473 41.102 20.431 1.00 18.78 C
ATOM 7 C4' A A 139 11.189 39.797 20.207 1.00 17.96 C
ATOM 8 O4' A A 139 12.579 39.923 20.614 1.00 17.24 O
ATOM 9 C3' A A 139 10.668 38.619 21.018 1.00 17.76 C
ATOM 10 O3' A A 139 9.497 38.041 20.461 1.00 17.09 O
ATOM 11 C2' A A 139 11.878 37.701 21.051 1.00 15.93 C
ATOM 12 O2' A A 139 12.047 37.049 19.806 1.00 17.32 O
ATOM 13 C1' A A 139 13.014 38.710 21.196 1.00 15.64 C
ATOM 14 N9 A A 139 13.296 38.955 22.620 1.00 18.76 N
ATOM 15 C8 A A 139 12.869 39.995 23.409 1.00 19.35 C
ATOM 16 N7 A A 139 13.309 39.908 24.650 1.00 17.87 N
ATOM 17 C5 A A 139 14.054 38.743 24.667 1.00 16.87 C
ATOM 18 C6 A A 139 14.792 38.086 25.671 1.00 19.31 C
ATOM 19 N6 A A 139 14.902 38.524 26.942 1.00 17.31 N
ATOM 20 N1 A A 139 15.424 36.943 25.321 1.00 16.92 N
ATOM 21 C2 A A 139 15.331 36.476 24.068 1.00 18.82 C
ATOM 22 N3 A A 139 14.669 37.013 23.039 1.00 17.70 N
ATOM 23 C4 A A 139 14.054 38.146 23.416 1.00 16.35 C
ATOM 24 P A A 140 8.381 37.321 21.397 1.00 16.93 P
ATOM 25 OP1 A A 140 7.684 38.328 22.220 1.00 17.14 O
ATOM 26 OP2 A A 140 9.143 36.281 22.077 1.00 17.22 O
ATOM 27 O5' A A 140 7.386 36.772 20.283 1.00 17.60 O
TER
ATOM 1 O3' G B 14 17.137 32.213 26.912 1.00 21.12 O
ATOM 2 P A B 15 18.494 31.396 27.109 1.00 36.46 P
ATOM 3 OP1 A B 15 18.040 30.060 27.581 1.00 29.51 O
ATOM 4 OP2 A B 15 19.444 32.175 27.933 1.00 29.06 O
ATOM 5 O5' A B 15 19.003 31.359 25.584 1.00 24.23 O
ATOM 6 C5' A B 15 19.467 30.114 25.113 1.00 21.65 C
ATOM 7 C4' A B 15 19.257 29.959 23.634 1.00 21.12 C
ATOM 8 O4' A B 15 17.847 30.018 23.300 1.00 18.98 O
ATOM 9 C3' A B 15 19.887 31.018 22.752 1.00 17.16 C
ATOM 10 O3' A B 15 21.294 30.852 22.630 1.00 17.68 O
ATOM 11 C2' A B 15 19.135 30.759 21.456 1.00 17.21 C
ATOM 12 O2' A B 15 19.629 29.555 20.894 1.00 19.61 O
ATOM 13 C1' A B 15 17.714 30.514 21.984 1.00 18.66 C
ATOM 14 N9 A B 15 16.961 31.782 21.994 1.00 16.27 N
ATOM 15 C8 A B 15 16.684 32.655 23.026 1.00 18.93 C
ATOM 16 N7 A B 15 16.027 33.731 22.641 1.00 17.13 N
ATOM 17 C5 A B 15 15.870 33.548 21.265 1.00 16.51 C
ATOM 18 C6 A B 15 15.262 34.315 20.256 1.00 17.29 C
ATOM 19 N6 A B 15 14.663 35.473 20.510 1.00 15.21 N
ATOM 20 N1 A B 15 15.290 33.838 18.982 1.00 16.94 N
ATOM 21 C2 A B 15 15.903 32.675 18.746 1.00 17.41 C
ATOM 22 N3 A B 15 16.517 31.874 19.610 1.00 16.41 N
ATOM 23 C4 A B 15 16.457 32.369 20.858 1.00 16.99 C
ATOM 24 P G B 16 22.241 32.131 22.559 1.00 19.33 P
ATOM 25 OP1 G B 16 23.612 31.591 22.385 1.00 19.20 O
ATOM 26 OP2 G B 16 21.919 32.985 23.733 1.00 17.99 O
ATOM 27 O5' G B 16 21.718 32.899 21.274 1.00 16.57 O
TER
ATOM 2 P A A 139 10.023 42.840 22.325 1.00 22.21 P
ATOM 3 OP1 A A 139 8.801 43.306 21.612 1.00 20.18 O
ATOM 4 OP2 A A 139 10.123 42.830 23.810 1.00 21.10 O
ATOM 5 O5' A A 139 10.438 41.404 21.813 1.00 20.81 O
ATOM 6 C5' A A 139 10.473 41.102 20.431 1.00 18.78 C
ATOM 7 C4' A A 139 11.189 39.797 20.207 1.00 17.96 C
ATOM 8 O4' A A 139 12.579 39.923 20.614 1.00 17.24 O
ATOM 9 C3' A A 139 10.668 38.619 21.018 1.00 17.76 C
ATOM 10 O3' A A 139 9.497 38.041 20.461 1.00 17.09 O
ATOM 11 C2' A A 139 11.878 37.701 21.051 1.00 15.93 C
ATOM 12 O2' A A 139 12.047 37.049 19.806 1.00 17.32 O
ATOM 13 C1' A A 139 13.014 38.710 21.196 1.00 15.64 C
ATOM 14 N9 A A 139 13.296 38.955 22.620 1.00 18.76 N
ATOM 15 C8 A A 139 12.869 39.995 23.409 1.00 19.35 C
ATOM 16 N7 A A 139 13.309 39.908 24.650 1.00 17.87 N
ATOM 17 C5 A A 139 14.054 38.743 24.667 1.00 16.87 C
ATOM 18 C6 A A 139 14.792 38.086 25.671 1.00 19.31 C
ATOM 19 N6 A A 139 14.902 38.524 26.942 1.00 17.31 N
ATOM 20 N1 A A 139 15.424 36.943 25.321 1.00 16.92 N
ATOM 21 C2 A A 139 15.331 36.476 24.068 1.00 18.82 C
ATOM 22 N3 A A 139 14.669 37.013 23.039 1.00 17.70 N
ATOM 23 C4 A A 139 14.054 38.146 23.416 1.00 16.35 C
ATOM 24 P A A 140 8.381 37.321 21.397 1.00 16.93 P
ATOM 25 OP1 A A 140 7.684 38.328 22.220 1.00 17.14 O
ATOM 26 OP2 A A 140 9.143 36.281 22.077 1.00 17.22 O
ATOM 27 O5' A A 140 7.386 36.772 20.283 1.00 17.60 O
TER
ATOM 1 O3' G B 14 17.137 32.213 26.912 1.00 21.12 O
ATOM 2 P A B 15 18.494 31.396 27.109 1.00 36.46 P
ATOM 3 OP1 A B 15 18.040 30.060 27.581 1.00 29.51 O
ATOM 4 OP2 A B 15 19.444 32.175 27.933 1.00 29.06 O
ATOM 5 O5' A B 15 19.003 31.359 25.584 1.00 24.23 O
ATOM 6 C5' A B 15 19.467 30.114 25.113 1.00 21.65 C
ATOM 7 C4' A B 15 19.257 29.959 23.634 1.00 21.12 C
ATOM 8 O4' A B 15 17.847 30.018 23.300 1.00 18.98 O
ATOM 9 C3' A B 15 19.887 31.018 22.752 1.00 17.16 C
ATOM 10 O3' A B 15 21.294 30.852 22.630 1.00 17.68 O
ATOM 11 C2' A B 15 19.135 30.759 21.456 1.00 17.21 C
ATOM 12 O2' A B 15 19.629 29.555 20.894 1.00 19.61 O
ATOM 13 C1' A B 15 17.714 30.514 21.984 1.00 18.66 C
ATOM 14 N9 A B 15 16.961 31.782 21.994 1.00 16.27 N
ATOM 15 C8 A B 15 16.684 32.655 23.026 1.00 18.93 C
ATOM 16 N7 A B 15 16.027 33.731 22.641 1.00 17.13 N
ATOM 17 C5 A B 15 15.870 33.548 21.265 1.00 16.51 C
ATOM 18 C6 A B 15 15.262 34.315 20.256 1.00 17.29 C
ATOM 19 N6 A B 15 14.663 35.473 20.510 1.00 15.21 N
ATOM 20 N1 A B 15 15.290 33.838 18.982 1.00 16.94 N
ATOM 21 C2 A B 15 15.903 32.675 18.746 1.00 17.41 C
ATOM 22 N3 A B 15 16.517 31.874 19.610 1.00 16.41 N
ATOM 23 C4 A B 15 16.457 32.369 20.858 1.00 16.99 C
ATOM 24 P G B 16 22.241 32.131 22.559 1.00 19.33 P
ATOM 25 OP1 G B 16 23.612 31.591 22.385 1.00 19.20 O
ATOM 26 OP2 G B 16 21.919 32.985 23.733 1.00 17.99 O
ATOM 27 O5' G B 16 21.718 32.899 21.274 1.00 16.57 O
TER
Atoms:
OP1: (8.801,43.306,21.612)
OP2: (10.123,42.830,23.810)
C3': (10.668,38.619,21.018)
C1': (13.014,38.710,21.196)
C5': (10.473,41.102,20.431)
O4': (12.579,39.923,20.614)
C8: (12.869,39.995,23.409)
O2': (12.047,37.049,19.806)
C6: (14.792,38.086,25.671)
C5: (14.054,38.743,24.667)
C4: (14.054,38.146,23.416)
P: (10.023,42.840,22.325)
C4': (11.189,39.797,20.207)
C2': (11.878,37.701,21.051)
C2: (15.331,36.476,24.068)
N1: (15.424,36.943,25.321)
N3: (14.669,37.013,23.039)
N6: (14.902,38.524,26.942)
N7: (13.309,39.908,24.650)
N9: (13.296,38.955,22.620)
O5': (10.438,41.404,21.813)
O3': (9.497,38.041,20.461)
OP2: (10.123,42.830,23.810)
C3': (10.668,38.619,21.018)
C1': (13.014,38.710,21.196)
C5': (10.473,41.102,20.431)
O4': (12.579,39.923,20.614)
C8: (12.869,39.995,23.409)
O2': (12.047,37.049,19.806)
C6: (14.792,38.086,25.671)
C5: (14.054,38.743,24.667)
C4: (14.054,38.146,23.416)
P: (10.023,42.840,22.325)
C4': (11.189,39.797,20.207)
C2': (11.878,37.701,21.051)
C2: (15.331,36.476,24.068)
N1: (15.424,36.943,25.321)
N3: (14.669,37.013,23.039)
N6: (14.902,38.524,26.942)
N7: (13.309,39.908,24.650)
N9: (13.296,38.955,22.620)
O5': (10.438,41.404,21.813)
O3': (9.497,38.041,20.461)
OP1: (18.040,30.060,27.581)
OP2: (19.444,32.175,27.933)
C3': (19.887,31.018,22.752)
C1': (17.714,30.514,21.984)
C5': (19.467,30.114,25.113)
O4': (17.847,30.018,23.300)
C8: (16.684,32.655,23.026)
O2': (19.629,29.555,20.894)
C6: (15.262,34.315,20.256)
C5: (15.870,33.548,21.265)
C4: (16.457,32.369,20.858)
P: (18.494,31.396,27.109)
C4': (19.257,29.959,23.634)
C2': (19.135,30.759,21.456)
C2: (15.903,32.675,18.746)
N1: (15.290,33.838,18.982)
N3: (16.517,31.874,19.610)
N6: (14.663,35.473,20.510)
N7: (16.027,33.731,22.641)
N9: (16.961,31.782,21.994)
O5': (19.003,31.359,25.584)
O3': (21.294,30.852,22.630)
OP2: (19.444,32.175,27.933)
C3': (19.887,31.018,22.752)
C1': (17.714,30.514,21.984)
C5': (19.467,30.114,25.113)
O4': (17.847,30.018,23.300)
C8: (16.684,32.655,23.026)
O2': (19.629,29.555,20.894)
C6: (15.262,34.315,20.256)
C5: (15.870,33.548,21.265)
C4: (16.457,32.369,20.858)
P: (18.494,31.396,27.109)
C4': (19.257,29.959,23.634)
C2': (19.135,30.759,21.456)
C2: (15.903,32.675,18.746)
N1: (15.290,33.838,18.982)
N3: (16.517,31.874,19.610)
N6: (14.663,35.473,20.510)
N7: (16.027,33.731,22.641)
N9: (16.961,31.782,21.994)
O5': (19.003,31.359,25.584)
O3': (21.294,30.852,22.630)
Image (generated by PyMOL):