Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A82:A102
Extra
PDB:
ATOM 1 O3' U A 81 -25.191 -93.861 70.301 1.00 1.24 O
ATOM 2 P A A 82 -24.137 -95.074 70.250 1.00 9.00 P
ATOM 3 OP1 A A 82 -24.906 -96.282 69.838 1.00 9.00 O
ATOM 4 OP2 A A 82 -23.396 -95.119 71.537 1.00 9.00 O
ATOM 5 O5' A A 82 -23.155 -94.620 69.089 1.00 9.00 O
ATOM 6 C5' A A 82 -23.396 -94.991 67.746 1.00 9.00 C
ATOM 7 C4' A A 82 -22.316 -94.475 66.869 1.00 9.00 C
ATOM 8 O4' A A 82 -21.949 -93.153 67.305 1.00 9.00 O
ATOM 9 C3' A A 82 -21.036 -95.278 66.908 1.00 9.00 C
ATOM 10 O3' A A 82 -21.050 -96.300 65.946 1.00 9.00 O
ATOM 11 C2' A A 82 -19.948 -94.257 66.649 1.00 9.00 C
ATOM 12 O2' A A 82 -19.723 -94.110 65.246 1.00 9.00 O
ATOM 13 C1' A A 82 -20.562 -92.969 67.191 1.00 9.00 C
ATOM 14 N9 A A 82 -20.030 -92.587 68.506 1.00 9.88 N
ATOM 15 C8 A A 82 -20.492 -92.945 69.710 1.00 9.88 C
ATOM 16 N7 A A 82 -19.844 -92.368 70.682 1.00 9.88 N
ATOM 17 C5 A A 82 -18.902 -91.549 70.094 1.00 9.88 C
ATOM 18 C6 A A 82 -17.882 -90.656 70.596 1.00 9.88 C
ATOM 19 N6 A A 82 -17.615 -90.425 71.891 1.00 9.88 N
ATOM 20 N1 A A 82 -17.115 -89.972 69.705 1.00 9.88 N
ATOM 21 C2 A A 82 -17.393 -90.217 68.415 1.00 9.88 C
ATOM 22 N3 A A 82 -18.305 -91.025 67.836 1.00 9.88 N
ATOM 23 C4 A A 82 -19.041 -91.674 68.734 1.00 9.88 C
ATOM 24 P A A 83 -21.131 -97.826 66.395 1.00 0.30 P
ATOM 25 OP1 A A 83 -22.570 -98.220 66.322 1.00 0.30 O
ATOM 26 OP2 A A 83 -20.403 -97.916 67.692 1.00 0.30 O
ATOM 27 O5' A A 83 -20.318 -98.568 65.241 1.00 0.30 O
TER
ATOM 1 O3' U B 101 -12.504 -85.325 67.892 1.00 48.87 O
ATOM 2 P A B 102 -13.180 -86.591 67.224 1.00 0.01 P
ATOM 3 OP1 A B 102 -14.307 -86.979 68.113 1.00 0.01 O
ATOM 4 OP2 A B 102 -12.078 -87.569 66.975 1.00 0.01 O
ATOM 5 O5' A B 102 -13.741 -86.035 65.833 1.00 0.01 O
ATOM 6 C5' A B 102 -12.863 -85.516 64.848 1.00 0.01 C
ATOM 7 C4' A B 102 -13.103 -86.131 63.475 1.00 0.01 C
ATOM 8 O4' A B 102 -13.052 -87.581 63.546 1.00 0.01 O
ATOM 9 C3' A B 102 -14.443 -85.843 62.815 1.00 0.01 C
ATOM 10 O3' A B 102 -14.495 -84.565 62.210 1.00 0.01 O
ATOM 11 C2' A B 102 -14.563 -86.983 61.821 1.00 0.01 C
ATOM 12 O2' A B 102 -13.768 -86.737 60.676 1.00 0.01 O
ATOM 13 C1' A B 102 -13.938 -88.133 62.603 1.00 0.01 C
ATOM 14 N9 A B 102 -14.941 -88.898 63.333 1.00 0.01 N
ATOM 15 C8 A B 102 -14.964 -89.002 64.690 1.00 0.01 C
ATOM 16 N7 A B 102 -15.946 -89.750 65.113 1.00 0.01 N
ATOM 17 C5 A B 102 -16.603 -90.155 63.968 1.00 0.01 C
ATOM 18 C6 A B 102 -17.721 -90.948 63.785 1.00 0.01 C
ATOM 19 N6 A B 102 -18.392 -91.506 64.777 1.00 0.01 N
ATOM 20 N1 A B 102 -18.122 -91.171 62.539 1.00 0.01 N
ATOM 21 C2 A B 102 -17.419 -90.624 61.561 1.00 0.01 C
ATOM 22 N3 A B 102 -16.359 -89.850 61.612 1.00 0.01 N
ATOM 23 C4 A B 102 -15.989 -89.644 62.861 1.00 0.01 C
ATOM 24 P A B 103 -15.637 -83.521 62.642 1.00 5.28 P
ATOM 25 OP1 A B 103 -15.365 -82.256 61.909 1.00 5.28 O
ATOM 26 OP2 A B 103 -15.686 -83.501 64.111 1.00 5.28 O
ATOM 27 O5' A B 103 -16.945 -84.184 62.065 1.00 5.28 O
TER
ATOM 2 P A A 82 -24.137 -95.074 70.250 1.00 9.00 P
ATOM 3 OP1 A A 82 -24.906 -96.282 69.838 1.00 9.00 O
ATOM 4 OP2 A A 82 -23.396 -95.119 71.537 1.00 9.00 O
ATOM 5 O5' A A 82 -23.155 -94.620 69.089 1.00 9.00 O
ATOM 6 C5' A A 82 -23.396 -94.991 67.746 1.00 9.00 C
ATOM 7 C4' A A 82 -22.316 -94.475 66.869 1.00 9.00 C
ATOM 8 O4' A A 82 -21.949 -93.153 67.305 1.00 9.00 O
ATOM 9 C3' A A 82 -21.036 -95.278 66.908 1.00 9.00 C
ATOM 10 O3' A A 82 -21.050 -96.300 65.946 1.00 9.00 O
ATOM 11 C2' A A 82 -19.948 -94.257 66.649 1.00 9.00 C
ATOM 12 O2' A A 82 -19.723 -94.110 65.246 1.00 9.00 O
ATOM 13 C1' A A 82 -20.562 -92.969 67.191 1.00 9.00 C
ATOM 14 N9 A A 82 -20.030 -92.587 68.506 1.00 9.88 N
ATOM 15 C8 A A 82 -20.492 -92.945 69.710 1.00 9.88 C
ATOM 16 N7 A A 82 -19.844 -92.368 70.682 1.00 9.88 N
ATOM 17 C5 A A 82 -18.902 -91.549 70.094 1.00 9.88 C
ATOM 18 C6 A A 82 -17.882 -90.656 70.596 1.00 9.88 C
ATOM 19 N6 A A 82 -17.615 -90.425 71.891 1.00 9.88 N
ATOM 20 N1 A A 82 -17.115 -89.972 69.705 1.00 9.88 N
ATOM 21 C2 A A 82 -17.393 -90.217 68.415 1.00 9.88 C
ATOM 22 N3 A A 82 -18.305 -91.025 67.836 1.00 9.88 N
ATOM 23 C4 A A 82 -19.041 -91.674 68.734 1.00 9.88 C
ATOM 24 P A A 83 -21.131 -97.826 66.395 1.00 0.30 P
ATOM 25 OP1 A A 83 -22.570 -98.220 66.322 1.00 0.30 O
ATOM 26 OP2 A A 83 -20.403 -97.916 67.692 1.00 0.30 O
ATOM 27 O5' A A 83 -20.318 -98.568 65.241 1.00 0.30 O
TER
ATOM 1 O3' U B 101 -12.504 -85.325 67.892 1.00 48.87 O
ATOM 2 P A B 102 -13.180 -86.591 67.224 1.00 0.01 P
ATOM 3 OP1 A B 102 -14.307 -86.979 68.113 1.00 0.01 O
ATOM 4 OP2 A B 102 -12.078 -87.569 66.975 1.00 0.01 O
ATOM 5 O5' A B 102 -13.741 -86.035 65.833 1.00 0.01 O
ATOM 6 C5' A B 102 -12.863 -85.516 64.848 1.00 0.01 C
ATOM 7 C4' A B 102 -13.103 -86.131 63.475 1.00 0.01 C
ATOM 8 O4' A B 102 -13.052 -87.581 63.546 1.00 0.01 O
ATOM 9 C3' A B 102 -14.443 -85.843 62.815 1.00 0.01 C
ATOM 10 O3' A B 102 -14.495 -84.565 62.210 1.00 0.01 O
ATOM 11 C2' A B 102 -14.563 -86.983 61.821 1.00 0.01 C
ATOM 12 O2' A B 102 -13.768 -86.737 60.676 1.00 0.01 O
ATOM 13 C1' A B 102 -13.938 -88.133 62.603 1.00 0.01 C
ATOM 14 N9 A B 102 -14.941 -88.898 63.333 1.00 0.01 N
ATOM 15 C8 A B 102 -14.964 -89.002 64.690 1.00 0.01 C
ATOM 16 N7 A B 102 -15.946 -89.750 65.113 1.00 0.01 N
ATOM 17 C5 A B 102 -16.603 -90.155 63.968 1.00 0.01 C
ATOM 18 C6 A B 102 -17.721 -90.948 63.785 1.00 0.01 C
ATOM 19 N6 A B 102 -18.392 -91.506 64.777 1.00 0.01 N
ATOM 20 N1 A B 102 -18.122 -91.171 62.539 1.00 0.01 N
ATOM 21 C2 A B 102 -17.419 -90.624 61.561 1.00 0.01 C
ATOM 22 N3 A B 102 -16.359 -89.850 61.612 1.00 0.01 N
ATOM 23 C4 A B 102 -15.989 -89.644 62.861 1.00 0.01 C
ATOM 24 P A B 103 -15.637 -83.521 62.642 1.00 5.28 P
ATOM 25 OP1 A B 103 -15.365 -82.256 61.909 1.00 5.28 O
ATOM 26 OP2 A B 103 -15.686 -83.501 64.111 1.00 5.28 O
ATOM 27 O5' A B 103 -16.945 -84.184 62.065 1.00 5.28 O
TER
Atoms:
OP1: (-24.906,-96.282,69.838)
OP2: (-23.396,-95.119,71.537)
C3': (-21.036,-95.278,66.908)
C1': (-20.562,-92.969,67.191)
C5': (-23.396,-94.991,67.746)
O4': (-21.949,-93.153,67.305)
C8: (-20.492,-92.945,69.710)
O2': (-19.723,-94.110,65.246)
C6: (-17.882,-90.656,70.596)
C5: (-18.902,-91.549,70.094)
C4: (-19.041,-91.674,68.734)
P: (-24.137,-95.074,70.250)
C4': (-22.316,-94.475,66.869)
C2': (-19.948,-94.257,66.649)
C2: (-17.393,-90.217,68.415)
N1: (-17.115,-89.972,69.705)
N3: (-18.305,-91.025,67.836)
N6: (-17.615,-90.425,71.891)
N7: (-19.844,-92.368,70.682)
N9: (-20.030,-92.587,68.506)
O5': (-23.155,-94.620,69.089)
O3': (-21.050,-96.300,65.946)
OP2: (-23.396,-95.119,71.537)
C3': (-21.036,-95.278,66.908)
C1': (-20.562,-92.969,67.191)
C5': (-23.396,-94.991,67.746)
O4': (-21.949,-93.153,67.305)
C8: (-20.492,-92.945,69.710)
O2': (-19.723,-94.110,65.246)
C6: (-17.882,-90.656,70.596)
C5: (-18.902,-91.549,70.094)
C4: (-19.041,-91.674,68.734)
P: (-24.137,-95.074,70.250)
C4': (-22.316,-94.475,66.869)
C2': (-19.948,-94.257,66.649)
C2: (-17.393,-90.217,68.415)
N1: (-17.115,-89.972,69.705)
N3: (-18.305,-91.025,67.836)
N6: (-17.615,-90.425,71.891)
N7: (-19.844,-92.368,70.682)
N9: (-20.030,-92.587,68.506)
O5': (-23.155,-94.620,69.089)
O3': (-21.050,-96.300,65.946)
OP1: (-14.307,-86.979,68.113)
OP2: (-12.078,-87.569,66.975)
C3': (-14.443,-85.843,62.815)
C1': (-13.938,-88.133,62.603)
C5': (-12.863,-85.516,64.848)
O4': (-13.052,-87.581,63.546)
C8: (-14.964,-89.002,64.690)
O2': (-13.768,-86.737,60.676)
C6: (-17.721,-90.948,63.785)
C5: (-16.603,-90.155,63.968)
C4: (-15.989,-89.644,62.861)
P: (-13.180,-86.591,67.224)
C4': (-13.103,-86.131,63.475)
C2': (-14.563,-86.983,61.821)
C2: (-17.419,-90.624,61.561)
N1: (-18.122,-91.171,62.539)
N3: (-16.359,-89.850,61.612)
N6: (-18.392,-91.506,64.777)
N7: (-15.946,-89.750,65.113)
N9: (-14.941,-88.898,63.333)
O5': (-13.741,-86.035,65.833)
O3': (-14.495,-84.565,62.210)
OP2: (-12.078,-87.569,66.975)
C3': (-14.443,-85.843,62.815)
C1': (-13.938,-88.133,62.603)
C5': (-12.863,-85.516,64.848)
O4': (-13.052,-87.581,63.546)
C8: (-14.964,-89.002,64.690)
O2': (-13.768,-86.737,60.676)
C6: (-17.721,-90.948,63.785)
C5: (-16.603,-90.155,63.968)
C4: (-15.989,-89.644,62.861)
P: (-13.180,-86.591,67.224)
C4': (-13.103,-86.131,63.475)
C2': (-14.563,-86.983,61.821)
C2: (-17.419,-90.624,61.561)
N1: (-18.122,-91.171,62.539)
N3: (-16.359,-89.850,61.612)
N6: (-18.392,-91.506,64.777)
N7: (-15.946,-89.750,65.113)
N9: (-14.941,-88.898,63.333)
O5': (-13.741,-86.035,65.833)
O3': (-14.495,-84.565,62.210)
Image (generated by PyMOL):