Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A876:A893
Extra
PDB:
ATOM 1 O3' C A 875 -118.840 121.177 127.447 1.00 88.18 O
ATOM 2 P A A 876 -118.224 120.975 125.977 1.00 96.50 P
ATOM 3 OP1 A A 876 -119.269 121.383 125.013 1.00 96.50 O
ATOM 4 OP2 A A 876 -117.684 119.589 125.909 1.00 96.50 O
ATOM 5 O5' A A 876 -117.029 122.021 125.948 1.00 96.50 O
ATOM 6 C5' A A 876 -117.245 123.364 125.542 1.00 96.50 C
ATOM 7 C4' A A 876 -115.943 124.095 125.364 1.00 96.50 C
ATOM 8 O4' A A 876 -115.158 124.000 126.585 1.00 96.50 O
ATOM 9 C3' A A 876 -115.010 123.539 124.299 1.00 96.50 C
ATOM 10 O3' A A 876 -115.370 123.910 122.976 1.00 96.50 O
ATOM 11 C2' A A 876 -113.652 124.071 124.745 1.00 96.50 C
ATOM 12 O2' A A 876 -113.496 125.445 124.400 1.00 96.50 O
ATOM 13 C1' A A 876 -113.776 123.952 126.265 1.00 96.50 C
ATOM 14 N9 A A 876 -113.198 122.678 126.765 1.00 95.95 N
ATOM 15 C8 A A 876 -113.654 121.381 126.618 1.00 95.95 C
ATOM 16 N7 A A 876 -112.876 120.482 127.172 1.00 95.95 N
ATOM 17 C5 A A 876 -111.823 121.225 127.713 1.00 95.95 C
ATOM 18 C6 A A 876 -110.649 120.882 128.440 1.00 95.95 C
ATOM 19 N6 A A 876 -110.301 119.630 128.778 1.00 95.95 N
ATOM 20 N1 A A 876 -109.814 121.884 128.828 1.00 95.95 N
ATOM 21 C2 A A 876 -110.129 123.143 128.506 1.00 95.95 C
ATOM 22 N3 A A 876 -111.190 123.586 127.834 1.00 95.95 N
ATOM 23 C4 A A 876 -112.008 122.576 127.460 1.00 95.95 C
ATOM 24 P A A 877 -114.548 123.319 121.717 1.00115.50 P
ATOM 25 OP1 A A 877 -115.526 122.609 120.850 1.00115.50 O
ATOM 26 OP2 A A 877 -113.392 122.556 122.264 1.00115.50 O
ATOM 27 O5' A A 877 -114.025 124.638 120.986 1.00115.50 O
TER
ATOM 1 O3' A B 892 -104.201 122.088 129.674 1.00123.23 O
ATOM 2 P A B 893 -105.298 122.913 130.510 1.00100.08 P
ATOM 3 OP1 A B 893 -104.802 123.008 131.909 1.00100.08 O
ATOM 4 OP2 A B 893 -106.614 122.270 130.255 1.00100.08 O
ATOM 5 O5' A B 893 -105.260 124.348 129.825 1.00100.08 O
ATOM 6 C5' A B 893 -104.084 125.141 129.865 1.00100.08 C
ATOM 7 C4' A B 893 -104.332 126.514 129.301 1.00100.08 C
ATOM 8 O4' A B 893 -104.873 126.402 127.955 1.00100.08 O
ATOM 9 C3' A B 893 -105.366 127.356 130.030 1.00100.08 C
ATOM 10 O3' A B 893 -104.877 127.958 131.208 1.00100.08 O
ATOM 11 C2' A B 893 -105.784 128.348 128.962 1.00100.08 C
ATOM 12 O2' A B 893 -104.790 129.349 128.780 1.00100.08 O
ATOM 13 C1' A B 893 -105.807 127.442 127.731 1.00100.08 C
ATOM 14 N9 A B 893 -107.138 126.842 127.530 1.00 99.78 N
ATOM 15 C8 A B 893 -107.522 125.518 127.533 1.00 99.78 C
ATOM 16 N7 A B 893 -108.811 125.349 127.333 1.00 99.78 N
ATOM 17 C5 A B 893 -109.309 126.648 127.206 1.00 99.78 C
ATOM 18 C6 A B 893 -110.603 127.176 126.988 1.00 99.78 C
ATOM 19 N6 A B 893 -111.700 126.428 126.844 1.00 99.78 N
ATOM 20 N1 A B 893 -110.735 128.522 126.922 1.00 99.78 N
ATOM 21 C2 A B 893 -109.645 129.285 127.058 1.00 99.78 C
ATOM 22 N3 A B 893 -108.387 128.915 127.270 1.00 99.78 N
ATOM 23 C4 A B 893 -108.285 127.573 127.332 1.00 99.78 C
ATOM 24 P C B 894 -105.881 128.230 132.432 1.00 81.21 P
ATOM 25 OP1 C B 894 -105.156 129.079 133.413 1.00 81.21 O
ATOM 26 OP2 C B 894 -106.393 126.907 132.877 1.00 81.21 O
ATOM 27 O5' C B 894 -107.057 129.066 131.743 1.00 81.21 O
TER
ATOM 2 P A A 876 -118.224 120.975 125.977 1.00 96.50 P
ATOM 3 OP1 A A 876 -119.269 121.383 125.013 1.00 96.50 O
ATOM 4 OP2 A A 876 -117.684 119.589 125.909 1.00 96.50 O
ATOM 5 O5' A A 876 -117.029 122.021 125.948 1.00 96.50 O
ATOM 6 C5' A A 876 -117.245 123.364 125.542 1.00 96.50 C
ATOM 7 C4' A A 876 -115.943 124.095 125.364 1.00 96.50 C
ATOM 8 O4' A A 876 -115.158 124.000 126.585 1.00 96.50 O
ATOM 9 C3' A A 876 -115.010 123.539 124.299 1.00 96.50 C
ATOM 10 O3' A A 876 -115.370 123.910 122.976 1.00 96.50 O
ATOM 11 C2' A A 876 -113.652 124.071 124.745 1.00 96.50 C
ATOM 12 O2' A A 876 -113.496 125.445 124.400 1.00 96.50 O
ATOM 13 C1' A A 876 -113.776 123.952 126.265 1.00 96.50 C
ATOM 14 N9 A A 876 -113.198 122.678 126.765 1.00 95.95 N
ATOM 15 C8 A A 876 -113.654 121.381 126.618 1.00 95.95 C
ATOM 16 N7 A A 876 -112.876 120.482 127.172 1.00 95.95 N
ATOM 17 C5 A A 876 -111.823 121.225 127.713 1.00 95.95 C
ATOM 18 C6 A A 876 -110.649 120.882 128.440 1.00 95.95 C
ATOM 19 N6 A A 876 -110.301 119.630 128.778 1.00 95.95 N
ATOM 20 N1 A A 876 -109.814 121.884 128.828 1.00 95.95 N
ATOM 21 C2 A A 876 -110.129 123.143 128.506 1.00 95.95 C
ATOM 22 N3 A A 876 -111.190 123.586 127.834 1.00 95.95 N
ATOM 23 C4 A A 876 -112.008 122.576 127.460 1.00 95.95 C
ATOM 24 P A A 877 -114.548 123.319 121.717 1.00115.50 P
ATOM 25 OP1 A A 877 -115.526 122.609 120.850 1.00115.50 O
ATOM 26 OP2 A A 877 -113.392 122.556 122.264 1.00115.50 O
ATOM 27 O5' A A 877 -114.025 124.638 120.986 1.00115.50 O
TER
ATOM 1 O3' A B 892 -104.201 122.088 129.674 1.00123.23 O
ATOM 2 P A B 893 -105.298 122.913 130.510 1.00100.08 P
ATOM 3 OP1 A B 893 -104.802 123.008 131.909 1.00100.08 O
ATOM 4 OP2 A B 893 -106.614 122.270 130.255 1.00100.08 O
ATOM 5 O5' A B 893 -105.260 124.348 129.825 1.00100.08 O
ATOM 6 C5' A B 893 -104.084 125.141 129.865 1.00100.08 C
ATOM 7 C4' A B 893 -104.332 126.514 129.301 1.00100.08 C
ATOM 8 O4' A B 893 -104.873 126.402 127.955 1.00100.08 O
ATOM 9 C3' A B 893 -105.366 127.356 130.030 1.00100.08 C
ATOM 10 O3' A B 893 -104.877 127.958 131.208 1.00100.08 O
ATOM 11 C2' A B 893 -105.784 128.348 128.962 1.00100.08 C
ATOM 12 O2' A B 893 -104.790 129.349 128.780 1.00100.08 O
ATOM 13 C1' A B 893 -105.807 127.442 127.731 1.00100.08 C
ATOM 14 N9 A B 893 -107.138 126.842 127.530 1.00 99.78 N
ATOM 15 C8 A B 893 -107.522 125.518 127.533 1.00 99.78 C
ATOM 16 N7 A B 893 -108.811 125.349 127.333 1.00 99.78 N
ATOM 17 C5 A B 893 -109.309 126.648 127.206 1.00 99.78 C
ATOM 18 C6 A B 893 -110.603 127.176 126.988 1.00 99.78 C
ATOM 19 N6 A B 893 -111.700 126.428 126.844 1.00 99.78 N
ATOM 20 N1 A B 893 -110.735 128.522 126.922 1.00 99.78 N
ATOM 21 C2 A B 893 -109.645 129.285 127.058 1.00 99.78 C
ATOM 22 N3 A B 893 -108.387 128.915 127.270 1.00 99.78 N
ATOM 23 C4 A B 893 -108.285 127.573 127.332 1.00 99.78 C
ATOM 24 P C B 894 -105.881 128.230 132.432 1.00 81.21 P
ATOM 25 OP1 C B 894 -105.156 129.079 133.413 1.00 81.21 O
ATOM 26 OP2 C B 894 -106.393 126.907 132.877 1.00 81.21 O
ATOM 27 O5' C B 894 -107.057 129.066 131.743 1.00 81.21 O
TER
Atoms:
OP1: (-119.269,121.383,125.013)
OP2: (-117.684,119.589,125.909)
C3': (-115.010,123.539,124.299)
C1': (-113.776,123.952,126.265)
C5': (-117.245,123.364,125.542)
O4': (-115.158,124.000,126.585)
C8: (-113.654,121.381,126.618)
O2': (-113.496,125.445,124.400)
C6: (-110.649,120.882,128.440)
C5: (-111.823,121.225,127.713)
C4: (-112.008,122.576,127.460)
P: (-118.224,120.975,125.977)
C4': (-115.943,124.095,125.364)
C2': (-113.652,124.071,124.745)
C2: (-110.129,123.143,128.506)
N1: (-109.814,121.884,128.828)
N3: (-111.190,123.586,127.834)
N6: (-110.301,119.630,128.778)
N7: (-112.876,120.482,127.172)
N9: (-113.198,122.678,126.765)
O5': (-117.029,122.021,125.948)
O3': (-115.370,123.910,122.976)
OP2: (-117.684,119.589,125.909)
C3': (-115.010,123.539,124.299)
C1': (-113.776,123.952,126.265)
C5': (-117.245,123.364,125.542)
O4': (-115.158,124.000,126.585)
C8: (-113.654,121.381,126.618)
O2': (-113.496,125.445,124.400)
C6: (-110.649,120.882,128.440)
C5: (-111.823,121.225,127.713)
C4: (-112.008,122.576,127.460)
P: (-118.224,120.975,125.977)
C4': (-115.943,124.095,125.364)
C2': (-113.652,124.071,124.745)
C2: (-110.129,123.143,128.506)
N1: (-109.814,121.884,128.828)
N3: (-111.190,123.586,127.834)
N6: (-110.301,119.630,128.778)
N7: (-112.876,120.482,127.172)
N9: (-113.198,122.678,126.765)
O5': (-117.029,122.021,125.948)
O3': (-115.370,123.910,122.976)
OP1: (-104.802,123.008,131.909)
OP2: (-106.614,122.270,130.255)
C3': (-105.366,127.356,130.030)
C1': (-105.807,127.442,127.731)
C5': (-104.084,125.141,129.865)
O4': (-104.873,126.402,127.955)
C8: (-107.522,125.518,127.533)
O2': (-104.790,129.349,128.780)
C6: (-110.603,127.176,126.988)
C5: (-109.309,126.648,127.206)
C4: (-108.285,127.573,127.332)
P: (-105.298,122.913,130.510)
C4': (-104.332,126.514,129.301)
C2': (-105.784,128.348,128.962)
C2: (-109.645,129.285,127.058)
N1: (-110.735,128.522,126.922)
N3: (-108.387,128.915,127.270)
N6: (-111.700,126.428,126.844)
N7: (-108.811,125.349,127.333)
N9: (-107.138,126.842,127.530)
O5': (-105.260,124.348,129.825)
O3': (-104.877,127.958,131.208)
OP2: (-106.614,122.270,130.255)
C3': (-105.366,127.356,130.030)
C1': (-105.807,127.442,127.731)
C5': (-104.084,125.141,129.865)
O4': (-104.873,126.402,127.955)
C8: (-107.522,125.518,127.533)
O2': (-104.790,129.349,128.780)
C6: (-110.603,127.176,126.988)
C5: (-109.309,126.648,127.206)
C4: (-108.285,127.573,127.332)
P: (-105.298,122.913,130.510)
C4': (-104.332,126.514,129.301)
C2': (-105.784,128.348,128.962)
C2: (-109.645,129.285,127.058)
N1: (-110.735,128.522,126.922)
N3: (-108.387,128.915,127.270)
N6: (-111.700,126.428,126.844)
N7: (-108.811,125.349,127.333)
N9: (-107.138,126.842,127.530)
O5': (-105.260,124.348,129.825)
O3': (-104.877,127.958,131.208)
Image (generated by PyMOL):