Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2517:2533
Extra
PDB:
ATOM 1 O3' U A 516 -76.587 49.605 19.199 1.00116.80 O
ATOM 2 P A A 517 -76.174 51.097 19.644 1.00119.56 P
ATOM 3 OP1 A A 517 -75.025 51.507 18.800 1.00119.65 O
ATOM 4 OP2 A A 517 -76.005 51.082 21.118 1.00119.03 O
ATOM 5 O5' A A 517 -77.473 51.951 19.251 1.00119.82 O
ATOM 6 C5' A A 517 -77.970 51.964 17.916 1.00120.35 C
ATOM 7 C4' A A 517 -79.268 52.722 17.817 1.00120.51 C
ATOM 8 O4' A A 517 -80.271 52.116 18.667 1.00120.41 O
ATOM 9 C3' A A 517 -79.222 54.153 18.286 1.00120.24 C
ATOM 10 O3' A A 517 -78.674 55.013 17.325 1.00120.43 O
ATOM 11 C2' A A 517 -80.674 54.457 18.609 1.00120.32 C
ATOM 12 O2' A A 517 -81.388 54.768 17.428 1.00120.80 O
ATOM 13 C1' A A 517 -81.165 53.109 19.132 1.00120.31 C
ATOM 14 N9 A A 517 -81.198 53.070 20.604 1.00119.81 N
ATOM 15 C8 A A 517 -80.358 52.382 21.438 1.00119.45 C
ATOM 16 N7 A A 517 -80.631 52.542 22.713 1.00119.04 N
ATOM 17 C5 A A 517 -81.719 53.394 22.722 1.00119.14 C
ATOM 18 C6 A A 517 -82.476 53.939 23.770 1.00118.85 C
ATOM 19 N6 A A 517 -82.248 53.701 25.059 1.00118.39 N
ATOM 20 N1 A A 517 -83.498 54.747 23.448 1.00119.05 N
ATOM 21 C2 A A 517 -83.724 54.973 22.151 1.00119.51 C
ATOM 22 N3 A A 517 -83.086 54.518 21.077 1.00119.82 N
ATOM 23 C4 A A 517 -82.077 53.725 21.431 1.00119.61 C
ATOM 24 P C A 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 25 OP1 C A 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 26 OP2 C A 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 27 O5' C A 518 -79.453 57.356 17.090 1.00118.27 O
TER
ATOM 1 O3' U B 532 -92.365 55.988 23.914 1.00116.09 O
ATOM 2 P A B 533 -92.527 54.866 22.798 1.00112.02 P
ATOM 3 OP1 A B 533 -93.952 54.437 22.812 1.00112.26 O
ATOM 4 OP2 A B 533 -91.473 53.846 23.040 1.00111.85 O
ATOM 5 O5' A B 533 -92.209 55.684 21.474 1.00112.36 O
ATOM 6 C5' A B 533 -91.649 55.050 20.350 1.00112.71 C
ATOM 7 C4' A B 533 -91.570 55.982 19.179 1.00113.03 C
ATOM 8 O4' A B 533 -90.553 56.989 19.420 1.00112.73 O
ATOM 9 C3' A B 533 -91.159 55.332 17.878 1.00113.47 C
ATOM 10 O3' A B 533 -92.246 54.747 17.207 1.00113.90 O
ATOM 11 C2' A B 533 -90.502 56.466 17.118 1.00113.55 C
ATOM 12 O2' A B 533 -91.481 57.331 16.566 1.00113.82 O
ATOM 13 C1' A B 533 -89.791 57.193 18.254 1.00113.00 C
ATOM 14 N9 A B 533 -88.449 56.640 18.493 1.00112.76 N
ATOM 15 C8 A B 533 -87.991 56.049 19.646 1.00112.34 C
ATOM 16 N7 A B 533 -86.754 55.637 19.573 1.00112.21 N
ATOM 17 C5 A B 533 -86.374 55.970 18.283 1.00112.57 C
ATOM 18 C6 A B 533 -85.177 55.791 17.573 1.00112.66 C
ATOM 19 N6 A B 533 -84.094 55.221 18.084 1.00112.36 N
ATOM 20 N1 A B 533 -85.122 56.226 16.297 1.00113.05 N
ATOM 21 C2 A B 533 -86.212 56.801 15.775 1.00113.35 C
ATOM 22 N3 A B 533 -87.401 57.028 16.336 1.00113.32 N
ATOM 23 C4 A B 533 -87.412 56.583 17.605 1.00112.91 C
ATOM 24 P A B 534 -92.287 53.165 17.005 1.00122.26 P
ATOM 25 OP1 A B 534 -93.526 52.855 16.256 1.00122.72 O
ATOM 26 OP2 A B 534 -92.084 52.540 18.332 1.00121.82 O
ATOM 27 O5' A B 534 -91.017 52.914 16.088 1.00122.40 O
TER
ATOM 2 P A A 517 -76.174 51.097 19.644 1.00119.56 P
ATOM 3 OP1 A A 517 -75.025 51.507 18.800 1.00119.65 O
ATOM 4 OP2 A A 517 -76.005 51.082 21.118 1.00119.03 O
ATOM 5 O5' A A 517 -77.473 51.951 19.251 1.00119.82 O
ATOM 6 C5' A A 517 -77.970 51.964 17.916 1.00120.35 C
ATOM 7 C4' A A 517 -79.268 52.722 17.817 1.00120.51 C
ATOM 8 O4' A A 517 -80.271 52.116 18.667 1.00120.41 O
ATOM 9 C3' A A 517 -79.222 54.153 18.286 1.00120.24 C
ATOM 10 O3' A A 517 -78.674 55.013 17.325 1.00120.43 O
ATOM 11 C2' A A 517 -80.674 54.457 18.609 1.00120.32 C
ATOM 12 O2' A A 517 -81.388 54.768 17.428 1.00120.80 O
ATOM 13 C1' A A 517 -81.165 53.109 19.132 1.00120.31 C
ATOM 14 N9 A A 517 -81.198 53.070 20.604 1.00119.81 N
ATOM 15 C8 A A 517 -80.358 52.382 21.438 1.00119.45 C
ATOM 16 N7 A A 517 -80.631 52.542 22.713 1.00119.04 N
ATOM 17 C5 A A 517 -81.719 53.394 22.722 1.00119.14 C
ATOM 18 C6 A A 517 -82.476 53.939 23.770 1.00118.85 C
ATOM 19 N6 A A 517 -82.248 53.701 25.059 1.00118.39 N
ATOM 20 N1 A A 517 -83.498 54.747 23.448 1.00119.05 N
ATOM 21 C2 A A 517 -83.724 54.973 22.151 1.00119.51 C
ATOM 22 N3 A A 517 -83.086 54.518 21.077 1.00119.82 N
ATOM 23 C4 A A 517 -82.077 53.725 21.431 1.00119.61 C
ATOM 24 P C A 518 -78.285 56.498 17.745 1.00117.94 P
ATOM 25 OP1 C A 518 -76.983 56.812 17.093 1.00117.96 O
ATOM 26 OP2 C A 518 -78.379 56.565 19.233 1.00117.44 O
ATOM 27 O5' C A 518 -79.453 57.356 17.090 1.00118.27 O
TER
ATOM 1 O3' U B 532 -92.365 55.988 23.914 1.00116.09 O
ATOM 2 P A B 533 -92.527 54.866 22.798 1.00112.02 P
ATOM 3 OP1 A B 533 -93.952 54.437 22.812 1.00112.26 O
ATOM 4 OP2 A B 533 -91.473 53.846 23.040 1.00111.85 O
ATOM 5 O5' A B 533 -92.209 55.684 21.474 1.00112.36 O
ATOM 6 C5' A B 533 -91.649 55.050 20.350 1.00112.71 C
ATOM 7 C4' A B 533 -91.570 55.982 19.179 1.00113.03 C
ATOM 8 O4' A B 533 -90.553 56.989 19.420 1.00112.73 O
ATOM 9 C3' A B 533 -91.159 55.332 17.878 1.00113.47 C
ATOM 10 O3' A B 533 -92.246 54.747 17.207 1.00113.90 O
ATOM 11 C2' A B 533 -90.502 56.466 17.118 1.00113.55 C
ATOM 12 O2' A B 533 -91.481 57.331 16.566 1.00113.82 O
ATOM 13 C1' A B 533 -89.791 57.193 18.254 1.00113.00 C
ATOM 14 N9 A B 533 -88.449 56.640 18.493 1.00112.76 N
ATOM 15 C8 A B 533 -87.991 56.049 19.646 1.00112.34 C
ATOM 16 N7 A B 533 -86.754 55.637 19.573 1.00112.21 N
ATOM 17 C5 A B 533 -86.374 55.970 18.283 1.00112.57 C
ATOM 18 C6 A B 533 -85.177 55.791 17.573 1.00112.66 C
ATOM 19 N6 A B 533 -84.094 55.221 18.084 1.00112.36 N
ATOM 20 N1 A B 533 -85.122 56.226 16.297 1.00113.05 N
ATOM 21 C2 A B 533 -86.212 56.801 15.775 1.00113.35 C
ATOM 22 N3 A B 533 -87.401 57.028 16.336 1.00113.32 N
ATOM 23 C4 A B 533 -87.412 56.583 17.605 1.00112.91 C
ATOM 24 P A B 534 -92.287 53.165 17.005 1.00122.26 P
ATOM 25 OP1 A B 534 -93.526 52.855 16.256 1.00122.72 O
ATOM 26 OP2 A B 534 -92.084 52.540 18.332 1.00121.82 O
ATOM 27 O5' A B 534 -91.017 52.914 16.088 1.00122.40 O
TER
Atoms:
OP1: (-75.025,51.507,18.800)
OP2: (-76.005,51.082,21.118)
C3': (-79.222,54.153,18.286)
C1': (-81.165,53.109,19.132)
C5': (-77.970,51.964,17.916)
O4': (-80.271,52.116,18.667)
C8: (-80.358,52.382,21.438)
O2': (-81.388,54.768,17.428)
C6: (-82.476,53.939,23.770)
C5: (-81.719,53.394,22.722)
C4: (-82.077,53.725,21.431)
P: (-76.174,51.097,19.644)
C4': (-79.268,52.722,17.817)
C2': (-80.674,54.457,18.609)
C2: (-83.724,54.973,22.151)
N1: (-83.498,54.747,23.448)
N3: (-83.086,54.518,21.077)
N6: (-82.248,53.701,25.059)
N7: (-80.631,52.542,22.713)
N9: (-81.198,53.070,20.604)
O5': (-77.473,51.951,19.251)
O3': (-78.674,55.013,17.325)
OP2: (-76.005,51.082,21.118)
C3': (-79.222,54.153,18.286)
C1': (-81.165,53.109,19.132)
C5': (-77.970,51.964,17.916)
O4': (-80.271,52.116,18.667)
C8: (-80.358,52.382,21.438)
O2': (-81.388,54.768,17.428)
C6: (-82.476,53.939,23.770)
C5: (-81.719,53.394,22.722)
C4: (-82.077,53.725,21.431)
P: (-76.174,51.097,19.644)
C4': (-79.268,52.722,17.817)
C2': (-80.674,54.457,18.609)
C2: (-83.724,54.973,22.151)
N1: (-83.498,54.747,23.448)
N3: (-83.086,54.518,21.077)
N6: (-82.248,53.701,25.059)
N7: (-80.631,52.542,22.713)
N9: (-81.198,53.070,20.604)
O5': (-77.473,51.951,19.251)
O3': (-78.674,55.013,17.325)
OP1: (-93.952,54.437,22.812)
OP2: (-91.473,53.846,23.040)
C3': (-91.159,55.332,17.878)
C1': (-89.791,57.193,18.254)
C5': (-91.649,55.050,20.350)
O4': (-90.553,56.989,19.420)
C8: (-87.991,56.049,19.646)
O2': (-91.481,57.331,16.566)
C6: (-85.177,55.791,17.573)
C5: (-86.374,55.970,18.283)
C4: (-87.412,56.583,17.605)
P: (-92.527,54.866,22.798)
C4': (-91.570,55.982,19.179)
C2': (-90.502,56.466,17.118)
C2: (-86.212,56.801,15.775)
N1: (-85.122,56.226,16.297)
N3: (-87.401,57.028,16.336)
N6: (-84.094,55.221,18.084)
N7: (-86.754,55.637,19.573)
N9: (-88.449,56.640,18.493)
O5': (-92.209,55.684,21.474)
O3': (-92.246,54.747,17.207)
OP2: (-91.473,53.846,23.040)
C3': (-91.159,55.332,17.878)
C1': (-89.791,57.193,18.254)
C5': (-91.649,55.050,20.350)
O4': (-90.553,56.989,19.420)
C8: (-87.991,56.049,19.646)
O2': (-91.481,57.331,16.566)
C6: (-85.177,55.791,17.573)
C5: (-86.374,55.970,18.283)
C4: (-87.412,56.583,17.605)
P: (-92.527,54.866,22.798)
C4': (-91.570,55.982,19.179)
C2': (-90.502,56.466,17.118)
C2: (-86.212,56.801,15.775)
N1: (-85.122,56.226,16.297)
N3: (-87.401,57.028,16.336)
N6: (-84.094,55.221,18.084)
N7: (-86.754,55.637,19.573)
N9: (-88.449,56.640,18.493)
O5': (-92.209,55.684,21.474)
O3': (-92.246,54.747,17.207)
Image (generated by PyMOL):