Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CMA:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.238 91.666 107.555 1.00 36.26 O
ATOM 2 P G A 556 3.667 91.143 108.969 1.00 38.01 P
ATOM 3 OP1 G A 556 4.641 91.579 110.008 1.00 37.14 O
ATOM 4 OP2 G A 556 3.319 89.701 108.844 1.00 35.39 O
ATOM 5 O5' G A 556 2.316 91.964 109.177 1.00 36.94 O
ATOM 6 C5' G A 556 2.324 93.285 109.746 1.00 36.33 C
ATOM 7 C4' G A 556 0.908 93.772 109.941 1.00 39.40 C
ATOM 8 O4' G A 556 0.248 93.866 108.647 1.00 40.23 O
ATOM 9 C3' G A 556 -0.005 92.844 110.726 1.00 40.43 C
ATOM 10 O3' G A 556 0.182 92.929 112.132 1.00 41.81 O
ATOM 11 C2' G A 556 -1.387 93.291 110.271 1.00 39.14 C
ATOM 12 O2' G A 556 -1.821 94.483 110.893 1.00 37.72 O
ATOM 13 C1' G A 556 -1.134 93.549 108.786 1.00 37.80 C
ATOM 14 N9 G A 556 -1.422 92.377 107.964 1.00 34.72 N
ATOM 15 C8 G A 556 -0.528 91.428 107.538 1.00 34.66 C
ATOM 16 N7 G A 556 -1.082 90.488 106.822 1.00 34.43 N
ATOM 17 C5 G A 556 -2.421 90.836 106.776 1.00 34.24 C
ATOM 18 C6 G A 556 -3.508 90.192 106.148 1.00 34.81 C
ATOM 19 O6 G A 556 -3.502 89.155 105.479 1.00 37.30 O
ATOM 20 N1 G A 556 -4.697 90.877 106.351 1.00 33.59 N
ATOM 21 C2 G A 556 -4.821 92.041 107.061 1.00 34.64 C
ATOM 22 N2 G A 556 -6.053 92.555 107.133 1.00 34.72 N
ATOM 23 N3 G A 556 -3.811 92.657 107.652 1.00 35.14 N
ATOM 24 C4 G A 556 -2.648 92.001 107.471 1.00 34.30 C
ATOM 25 P A A 557 -0.206 91.672 113.056 1.00 43.50 P
ATOM 26 OP1 A A 557 0.504 91.844 114.349 1.00 43.01 O
ATOM 27 OP2 A A 557 -0.041 90.404 112.291 1.00 40.80 O
ATOM 28 O5' A A 557 -1.767 91.880 113.281 1.00 45.85 O
TER
ATOM 1 O3' G B 576 -8.001 88.418 106.378 1.00 60.07 O
ATOM 2 P U B 577 -8.260 89.404 105.127 1.00 58.81 P
ATOM 3 OP1 U B 577 -8.732 88.614 103.962 1.00 58.20 O
ATOM 4 OP2 U B 577 -7.074 90.283 104.979 1.00 59.93 O
ATOM 5 O5' U B 577 -9.444 90.340 105.639 1.00 57.59 O
ATOM 6 C5' U B 577 -10.708 89.790 106.088 1.00 55.49 C
ATOM 7 C4' U B 577 -11.195 90.532 107.316 1.00 53.94 C
ATOM 8 O4' U B 577 -10.532 90.043 108.511 1.00 53.18 O
ATOM 9 C3' U B 577 -10.914 92.022 107.296 1.00 53.60 C
ATOM 10 O3' U B 577 -11.902 92.712 106.537 1.00 54.71 O
ATOM 11 C2' U B 577 -10.884 92.398 108.776 1.00 52.74 C
ATOM 12 O2' U B 577 -12.143 92.701 109.326 1.00 51.38 O
ATOM 13 C1' U B 577 -10.324 91.119 109.419 1.00 52.93 C
ATOM 14 N1 U B 577 -8.897 91.159 109.796 1.00 52.34 N
ATOM 15 C2 U B 577 -8.480 92.143 110.688 1.00 51.88 C
ATOM 16 O2 U B 577 -9.238 92.968 111.182 1.00 51.66 O
ATOM 17 N3 U B 577 -7.138 92.125 110.979 1.00 50.76 N
ATOM 18 C4 U B 577 -6.189 91.252 110.491 1.00 50.46 C
ATOM 19 O4 U B 577 -5.010 91.395 110.820 1.00 50.38 O
ATOM 20 C5 U B 577 -6.693 90.264 109.590 1.00 50.27 C
ATOM 21 C6 U B 577 -7.992 90.250 109.280 1.00 51.56 C
ATOM 22 P A B 578 -11.505 94.054 105.750 1.00 56.84 P
ATOM 23 OP1 A B 578 -12.669 94.546 104.966 1.00 57.09 O
ATOM 24 OP2 A B 578 -10.211 93.805 105.054 1.00 59.46 O
ATOM 25 O5' A B 578 -11.246 95.089 106.924 1.00 52.87 O
TER
ATOM 2 P G A 556 3.667 91.143 108.969 1.00 38.01 P
ATOM 3 OP1 G A 556 4.641 91.579 110.008 1.00 37.14 O
ATOM 4 OP2 G A 556 3.319 89.701 108.844 1.00 35.39 O
ATOM 5 O5' G A 556 2.316 91.964 109.177 1.00 36.94 O
ATOM 6 C5' G A 556 2.324 93.285 109.746 1.00 36.33 C
ATOM 7 C4' G A 556 0.908 93.772 109.941 1.00 39.40 C
ATOM 8 O4' G A 556 0.248 93.866 108.647 1.00 40.23 O
ATOM 9 C3' G A 556 -0.005 92.844 110.726 1.00 40.43 C
ATOM 10 O3' G A 556 0.182 92.929 112.132 1.00 41.81 O
ATOM 11 C2' G A 556 -1.387 93.291 110.271 1.00 39.14 C
ATOM 12 O2' G A 556 -1.821 94.483 110.893 1.00 37.72 O
ATOM 13 C1' G A 556 -1.134 93.549 108.786 1.00 37.80 C
ATOM 14 N9 G A 556 -1.422 92.377 107.964 1.00 34.72 N
ATOM 15 C8 G A 556 -0.528 91.428 107.538 1.00 34.66 C
ATOM 16 N7 G A 556 -1.082 90.488 106.822 1.00 34.43 N
ATOM 17 C5 G A 556 -2.421 90.836 106.776 1.00 34.24 C
ATOM 18 C6 G A 556 -3.508 90.192 106.148 1.00 34.81 C
ATOM 19 O6 G A 556 -3.502 89.155 105.479 1.00 37.30 O
ATOM 20 N1 G A 556 -4.697 90.877 106.351 1.00 33.59 N
ATOM 21 C2 G A 556 -4.821 92.041 107.061 1.00 34.64 C
ATOM 22 N2 G A 556 -6.053 92.555 107.133 1.00 34.72 N
ATOM 23 N3 G A 556 -3.811 92.657 107.652 1.00 35.14 N
ATOM 24 C4 G A 556 -2.648 92.001 107.471 1.00 34.30 C
ATOM 25 P A A 557 -0.206 91.672 113.056 1.00 43.50 P
ATOM 26 OP1 A A 557 0.504 91.844 114.349 1.00 43.01 O
ATOM 27 OP2 A A 557 -0.041 90.404 112.291 1.00 40.80 O
ATOM 28 O5' A A 557 -1.767 91.880 113.281 1.00 45.85 O
TER
ATOM 1 O3' G B 576 -8.001 88.418 106.378 1.00 60.07 O
ATOM 2 P U B 577 -8.260 89.404 105.127 1.00 58.81 P
ATOM 3 OP1 U B 577 -8.732 88.614 103.962 1.00 58.20 O
ATOM 4 OP2 U B 577 -7.074 90.283 104.979 1.00 59.93 O
ATOM 5 O5' U B 577 -9.444 90.340 105.639 1.00 57.59 O
ATOM 6 C5' U B 577 -10.708 89.790 106.088 1.00 55.49 C
ATOM 7 C4' U B 577 -11.195 90.532 107.316 1.00 53.94 C
ATOM 8 O4' U B 577 -10.532 90.043 108.511 1.00 53.18 O
ATOM 9 C3' U B 577 -10.914 92.022 107.296 1.00 53.60 C
ATOM 10 O3' U B 577 -11.902 92.712 106.537 1.00 54.71 O
ATOM 11 C2' U B 577 -10.884 92.398 108.776 1.00 52.74 C
ATOM 12 O2' U B 577 -12.143 92.701 109.326 1.00 51.38 O
ATOM 13 C1' U B 577 -10.324 91.119 109.419 1.00 52.93 C
ATOM 14 N1 U B 577 -8.897 91.159 109.796 1.00 52.34 N
ATOM 15 C2 U B 577 -8.480 92.143 110.688 1.00 51.88 C
ATOM 16 O2 U B 577 -9.238 92.968 111.182 1.00 51.66 O
ATOM 17 N3 U B 577 -7.138 92.125 110.979 1.00 50.76 N
ATOM 18 C4 U B 577 -6.189 91.252 110.491 1.00 50.46 C
ATOM 19 O4 U B 577 -5.010 91.395 110.820 1.00 50.38 O
ATOM 20 C5 U B 577 -6.693 90.264 109.590 1.00 50.27 C
ATOM 21 C6 U B 577 -7.992 90.250 109.280 1.00 51.56 C
ATOM 22 P A B 578 -11.505 94.054 105.750 1.00 56.84 P
ATOM 23 OP1 A B 578 -12.669 94.546 104.966 1.00 57.09 O
ATOM 24 OP2 A B 578 -10.211 93.805 105.054 1.00 59.46 O
ATOM 25 O5' A B 578 -11.246 95.089 106.924 1.00 52.87 O
TER
Atoms:
OP1: (4.641,91.579,110.008)
OP2: (3.319,89.701,108.844)
C3': (-0.005,92.844,110.726)
C1': (-1.134,93.549,108.786)
C5': (2.324,93.285,109.746)
O6: (-3.502,89.155,105.479)
O4': (0.248,93.866,108.647)
C8: (-0.528,91.428,107.538)
C2: (-4.821,92.041,107.061)
C6: (-3.508,90.192,106.148)
C5: (-2.421,90.836,106.776)
C4: (-2.648,92.001,107.471)
P: (3.667,91.143,108.969)
C4': (0.908,93.772,109.941)
C2': (-1.387,93.291,110.271)
O2': (-1.821,94.483,110.893)
N1: (-4.697,90.877,106.351)
N2: (-6.053,92.555,107.133)
N3: (-3.811,92.657,107.652)
N7: (-1.082,90.488,106.822)
N9: (-1.422,92.377,107.964)
O5': (2.316,91.964,109.177)
O3': (0.182,92.929,112.132)
OP2: (3.319,89.701,108.844)
C3': (-0.005,92.844,110.726)
C1': (-1.134,93.549,108.786)
C5': (2.324,93.285,109.746)
O6: (-3.502,89.155,105.479)
O4': (0.248,93.866,108.647)
C8: (-0.528,91.428,107.538)
C2: (-4.821,92.041,107.061)
C6: (-3.508,90.192,106.148)
C5: (-2.421,90.836,106.776)
C4: (-2.648,92.001,107.471)
P: (3.667,91.143,108.969)
C4': (0.908,93.772,109.941)
C2': (-1.387,93.291,110.271)
O2': (-1.821,94.483,110.893)
N1: (-4.697,90.877,106.351)
N2: (-6.053,92.555,107.133)
N3: (-3.811,92.657,107.652)
N7: (-1.082,90.488,106.822)
N9: (-1.422,92.377,107.964)
O5': (2.316,91.964,109.177)
O3': (0.182,92.929,112.132)
C4: (-6.189,91.252,110.491)
N3: (-7.138,92.125,110.979)
OP1: (-8.732,88.614,103.962)
OP2: (-7.074,90.283,104.979)
C2: (-8.480,92.143,110.688)
C1': (-10.324,91.119,109.419)
C3': (-10.914,92.022,107.296)
O5': (-9.444,90.340,105.639)
O4': (-10.532,90.043,108.511)
C5': (-10.708,89.790,106.088)
P: (-8.260,89.404,105.127)
C4': (-11.195,90.532,107.316)
C2': (-10.884,92.398,108.776)
O2': (-12.143,92.701,109.326)
N1: (-8.897,91.159,109.796)
O4: (-5.010,91.395,110.820)
O2: (-9.238,92.968,111.182)
C6: (-7.992,90.250,109.280)
C5: (-6.693,90.264,109.590)
O3': (-11.902,92.712,106.537)
N3: (-7.138,92.125,110.979)
OP1: (-8.732,88.614,103.962)
OP2: (-7.074,90.283,104.979)
C2: (-8.480,92.143,110.688)
C1': (-10.324,91.119,109.419)
C3': (-10.914,92.022,107.296)
O5': (-9.444,90.340,105.639)
O4': (-10.532,90.043,108.511)
C5': (-10.708,89.790,106.088)
P: (-8.260,89.404,105.127)
C4': (-11.195,90.532,107.316)
C2': (-10.884,92.398,108.776)
O2': (-12.143,92.701,109.326)
N1: (-8.897,91.159,109.796)
O4: (-5.010,91.395,110.820)
O2: (-9.238,92.968,111.182)
C6: (-7.992,90.250,109.280)
C5: (-6.693,90.264,109.590)
O3': (-11.902,92.712,106.537)
Image (generated by PyMOL):