Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01350:01394
Extra
PDB:
ATOM 1 O3' A A1349 38.766 182.409 79.790 1.00 50.69 O
ATOM 2 P G A1350 40.105 182.756 80.599 1.00 49.15 P
ATOM 3 OP1 G A1350 39.699 183.574 81.765 1.00 49.15 O
ATOM 4 OP2 G A1350 41.106 183.293 79.634 1.00 48.35 O
ATOM 5 O5' G A1350 40.596 181.337 81.143 1.00 49.27 O
ATOM 6 C5' G A1350 39.749 180.532 81.997 1.00 46.91 C
ATOM 7 C4' G A1350 40.323 179.141 82.143 1.00 46.46 C
ATOM 8 O4' G A1350 40.310 178.478 80.855 1.00 44.60 O
ATOM 9 C3' G A1350 41.767 179.088 82.613 1.00 46.58 C
ATOM 10 O3' G A1350 41.795 179.077 84.049 1.00 47.59 O
ATOM 11 C2' G A1350 42.262 177.771 82.024 1.00 44.61 C
ATOM 12 O2' G A1350 41.895 176.681 82.834 1.00 45.55 O
ATOM 13 C1' G A1350 41.470 177.685 80.713 1.00 43.04 C
ATOM 14 N9 G A1350 42.153 178.119 79.500 1.00 42.69 N
ATOM 15 C8 G A1350 42.251 179.407 79.036 1.00 43.05 C
ATOM 16 N7 G A1350 42.890 179.497 77.902 1.00 43.28 N
ATOM 17 C5 G A1350 43.244 178.192 77.596 1.00 42.13 C
ATOM 18 C6 G A1350 43.955 177.673 76.487 1.00 42.17 C
ATOM 19 O6 G A1350 44.432 178.282 75.521 1.00 42.27 O
ATOM 20 N1 G A1350 44.097 176.295 76.574 1.00 41.62 N
ATOM 21 C2 G A1350 43.629 175.516 77.596 1.00 40.33 C
ATOM 22 N2 G A1350 43.889 174.208 77.495 1.00 41.16 N
ATOM 23 N3 G A1350 42.961 175.984 78.638 1.00 41.71 N
ATOM 24 C4 G A1350 42.805 177.325 78.574 1.00 42.72 C
ATOM 25 P A A1351 42.807 180.047 84.855 1.00 49.50 P
ATOM 26 OP1 A A1351 42.619 179.739 86.295 1.00 47.85 O
ATOM 27 OP2 A A1351 42.657 181.453 84.382 1.00 49.48 O
ATOM 28 O5' A A1351 44.256 179.534 84.430 1.00 48.78 O
TER
ATOM 1 O3' A B1393 47.192 174.462 77.008 1.00 39.92 O
ATOM 2 P U B1394 47.103 174.415 75.405 1.00 41.50 P
ATOM 3 OP1 U B1394 45.666 174.628 75.089 1.00 41.14 O
ATOM 4 OP2 U B1394 47.822 173.247 74.828 1.00 40.30 O
ATOM 5 O5' U B1394 47.901 175.716 74.969 1.00 40.54 O
ATOM 6 C5' U B1394 47.639 176.366 73.719 1.00 39.81 C
ATOM 7 C4' U B1394 48.111 177.791 73.791 1.00 38.36 C
ATOM 8 O4' U B1394 47.301 178.500 74.768 1.00 38.81 O
ATOM 9 C3' U B1394 49.553 177.957 74.248 1.00 38.49 C
ATOM 10 O3' U B1394 50.119 179.064 73.588 1.00 35.96 O
ATOM 11 C2' U B1394 49.413 178.203 75.746 1.00 38.91 C
ATOM 12 O2' U B1394 50.491 178.920 76.315 1.00 39.45 O
ATOM 13 C1' U B1394 48.122 179.011 75.797 1.00 38.27 C
ATOM 14 N1 U B1394 47.382 178.879 77.059 1.00 40.60 N
ATOM 15 C2 U B1394 46.865 180.029 77.620 1.00 41.93 C
ATOM 16 O2 U B1394 47.019 181.136 77.125 1.00 42.85 O
ATOM 17 N3 U B1394 46.162 179.835 78.784 1.00 40.43 N
ATOM 18 C4 U B1394 45.932 178.635 79.424 1.00 40.05 C
ATOM 19 O4 U B1394 45.219 178.612 80.423 1.00 43.04 O
ATOM 20 C5 U B1394 46.509 177.499 78.789 1.00 38.24 C
ATOM 21 C6 U B1394 47.196 177.652 77.660 1.00 40.06 C
ATOM 22 P C B1395 51.181 178.805 72.428 1.00 40.84 P
ATOM 23 OP1 C B1395 51.676 180.120 71.924 1.00 41.81 O
ATOM 24 OP2 C B1395 50.569 177.839 71.479 1.00 39.21 O
ATOM 25 O5' C B1395 52.366 178.057 73.184 1.00 40.16 O
TER
ATOM 2 P G A1350 40.105 182.756 80.599 1.00 49.15 P
ATOM 3 OP1 G A1350 39.699 183.574 81.765 1.00 49.15 O
ATOM 4 OP2 G A1350 41.106 183.293 79.634 1.00 48.35 O
ATOM 5 O5' G A1350 40.596 181.337 81.143 1.00 49.27 O
ATOM 6 C5' G A1350 39.749 180.532 81.997 1.00 46.91 C
ATOM 7 C4' G A1350 40.323 179.141 82.143 1.00 46.46 C
ATOM 8 O4' G A1350 40.310 178.478 80.855 1.00 44.60 O
ATOM 9 C3' G A1350 41.767 179.088 82.613 1.00 46.58 C
ATOM 10 O3' G A1350 41.795 179.077 84.049 1.00 47.59 O
ATOM 11 C2' G A1350 42.262 177.771 82.024 1.00 44.61 C
ATOM 12 O2' G A1350 41.895 176.681 82.834 1.00 45.55 O
ATOM 13 C1' G A1350 41.470 177.685 80.713 1.00 43.04 C
ATOM 14 N9 G A1350 42.153 178.119 79.500 1.00 42.69 N
ATOM 15 C8 G A1350 42.251 179.407 79.036 1.00 43.05 C
ATOM 16 N7 G A1350 42.890 179.497 77.902 1.00 43.28 N
ATOM 17 C5 G A1350 43.244 178.192 77.596 1.00 42.13 C
ATOM 18 C6 G A1350 43.955 177.673 76.487 1.00 42.17 C
ATOM 19 O6 G A1350 44.432 178.282 75.521 1.00 42.27 O
ATOM 20 N1 G A1350 44.097 176.295 76.574 1.00 41.62 N
ATOM 21 C2 G A1350 43.629 175.516 77.596 1.00 40.33 C
ATOM 22 N2 G A1350 43.889 174.208 77.495 1.00 41.16 N
ATOM 23 N3 G A1350 42.961 175.984 78.638 1.00 41.71 N
ATOM 24 C4 G A1350 42.805 177.325 78.574 1.00 42.72 C
ATOM 25 P A A1351 42.807 180.047 84.855 1.00 49.50 P
ATOM 26 OP1 A A1351 42.619 179.739 86.295 1.00 47.85 O
ATOM 27 OP2 A A1351 42.657 181.453 84.382 1.00 49.48 O
ATOM 28 O5' A A1351 44.256 179.534 84.430 1.00 48.78 O
TER
ATOM 1 O3' A B1393 47.192 174.462 77.008 1.00 39.92 O
ATOM 2 P U B1394 47.103 174.415 75.405 1.00 41.50 P
ATOM 3 OP1 U B1394 45.666 174.628 75.089 1.00 41.14 O
ATOM 4 OP2 U B1394 47.822 173.247 74.828 1.00 40.30 O
ATOM 5 O5' U B1394 47.901 175.716 74.969 1.00 40.54 O
ATOM 6 C5' U B1394 47.639 176.366 73.719 1.00 39.81 C
ATOM 7 C4' U B1394 48.111 177.791 73.791 1.00 38.36 C
ATOM 8 O4' U B1394 47.301 178.500 74.768 1.00 38.81 O
ATOM 9 C3' U B1394 49.553 177.957 74.248 1.00 38.49 C
ATOM 10 O3' U B1394 50.119 179.064 73.588 1.00 35.96 O
ATOM 11 C2' U B1394 49.413 178.203 75.746 1.00 38.91 C
ATOM 12 O2' U B1394 50.491 178.920 76.315 1.00 39.45 O
ATOM 13 C1' U B1394 48.122 179.011 75.797 1.00 38.27 C
ATOM 14 N1 U B1394 47.382 178.879 77.059 1.00 40.60 N
ATOM 15 C2 U B1394 46.865 180.029 77.620 1.00 41.93 C
ATOM 16 O2 U B1394 47.019 181.136 77.125 1.00 42.85 O
ATOM 17 N3 U B1394 46.162 179.835 78.784 1.00 40.43 N
ATOM 18 C4 U B1394 45.932 178.635 79.424 1.00 40.05 C
ATOM 19 O4 U B1394 45.219 178.612 80.423 1.00 43.04 O
ATOM 20 C5 U B1394 46.509 177.499 78.789 1.00 38.24 C
ATOM 21 C6 U B1394 47.196 177.652 77.660 1.00 40.06 C
ATOM 22 P C B1395 51.181 178.805 72.428 1.00 40.84 P
ATOM 23 OP1 C B1395 51.676 180.120 71.924 1.00 41.81 O
ATOM 24 OP2 C B1395 50.569 177.839 71.479 1.00 39.21 O
ATOM 25 O5' C B1395 52.366 178.057 73.184 1.00 40.16 O
TER
Atoms:
OP1: (39.699,183.574,81.765)
OP2: (41.106,183.293,79.634)
C3': (41.767,179.088,82.613)
C1': (41.470,177.685,80.713)
C5': (39.749,180.532,81.997)
O6: (44.432,178.282,75.521)
O4': (40.310,178.478,80.855)
C8: (42.251,179.407,79.036)
C2: (43.629,175.516,77.596)
C6: (43.955,177.673,76.487)
C5: (43.244,178.192,77.596)
C4: (42.805,177.325,78.574)
P: (40.105,182.756,80.599)
C4': (40.323,179.141,82.143)
C2': (42.262,177.771,82.024)
O2': (41.895,176.681,82.834)
N1: (44.097,176.295,76.574)
N2: (43.889,174.208,77.495)
N3: (42.961,175.984,78.638)
N7: (42.890,179.497,77.902)
N9: (42.153,178.119,79.500)
O5': (40.596,181.337,81.143)
O3': (41.795,179.077,84.049)
OP2: (41.106,183.293,79.634)
C3': (41.767,179.088,82.613)
C1': (41.470,177.685,80.713)
C5': (39.749,180.532,81.997)
O6: (44.432,178.282,75.521)
O4': (40.310,178.478,80.855)
C8: (42.251,179.407,79.036)
C2: (43.629,175.516,77.596)
C6: (43.955,177.673,76.487)
C5: (43.244,178.192,77.596)
C4: (42.805,177.325,78.574)
P: (40.105,182.756,80.599)
C4': (40.323,179.141,82.143)
C2': (42.262,177.771,82.024)
O2': (41.895,176.681,82.834)
N1: (44.097,176.295,76.574)
N2: (43.889,174.208,77.495)
N3: (42.961,175.984,78.638)
N7: (42.890,179.497,77.902)
N9: (42.153,178.119,79.500)
O5': (40.596,181.337,81.143)
O3': (41.795,179.077,84.049)
C4: (45.932,178.635,79.424)
N3: (46.162,179.835,78.784)
OP1: (45.666,174.628,75.089)
OP2: (47.822,173.247,74.828)
C2: (46.865,180.029,77.620)
C1': (48.122,179.011,75.797)
C3': (49.553,177.957,74.248)
O5': (47.901,175.716,74.969)
O4': (47.301,178.500,74.768)
C5': (47.639,176.366,73.719)
P: (47.103,174.415,75.405)
C4': (48.111,177.791,73.791)
C2': (49.413,178.203,75.746)
O2': (50.491,178.920,76.315)
N1: (47.382,178.879,77.059)
O4: (45.219,178.612,80.423)
O2: (47.019,181.136,77.125)
C6: (47.196,177.652,77.660)
C5: (46.509,177.499,78.789)
O3': (50.119,179.064,73.588)
N3: (46.162,179.835,78.784)
OP1: (45.666,174.628,75.089)
OP2: (47.822,173.247,74.828)
C2: (46.865,180.029,77.620)
C1': (48.122,179.011,75.797)
C3': (49.553,177.957,74.248)
O5': (47.901,175.716,74.969)
O4': (47.301,178.500,74.768)
C5': (47.639,176.366,73.719)
P: (47.103,174.415,75.405)
C4': (48.111,177.791,73.791)
C2': (49.413,178.203,75.746)
O2': (50.491,178.920,76.315)
N1: (47.382,178.879,77.059)
O4: (45.219,178.612,80.423)
O2: (47.019,181.136,77.125)
C6: (47.196,177.652,77.660)
C5: (46.509,177.499,78.789)
O3': (50.119,179.064,73.588)
Image (generated by PyMOL):