Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2569:A2499
Extra
PDB:
ATOM 1 O3' C A2568 -69.289 -62.378 -11.625 1.00 0.01 O
ATOM 2 P G A2569 -69.579 -61.693 -10.219 1.00 0.01 P
ATOM 3 OP1 G A2569 -69.374 -62.747 -9.192 1.00 0.01 O
ATOM 4 OP2 G A2569 -70.877 -61.049 -10.310 1.00 0.01 O
ATOM 5 O5' G A2569 -68.466 -60.583 -10.119 1.00 0.01 O
ATOM 6 C5' G A2569 -67.214 -60.754 -10.732 1.00 0.01 C
ATOM 7 C4' G A2569 -66.123 -60.362 -9.801 1.00 0.01 C
ATOM 8 O4' G A2569 -66.252 -58.981 -9.521 1.00 0.01 O
ATOM 9 C3' G A2569 -66.159 -61.033 -8.449 1.00 0.01 C
ATOM 10 O3' G A2569 -65.450 -62.244 -8.441 1.00 0.01 O
ATOM 11 C2' G A2569 -65.581 -60.002 -7.496 1.00 0.01 C
ATOM 12 O2' G A2569 -64.192 -60.191 -7.331 1.00 0.01 O
ATOM 13 C1' G A2569 -65.814 -58.694 -8.227 1.00 0.01 C
ATOM 14 N9 G A2569 -66.820 -57.855 -7.572 1.00 0.02 N
ATOM 15 C8 G A2569 -66.683 -56.530 -7.279 1.00 0.02 C
ATOM 16 N7 G A2569 -67.736 -56.016 -6.701 1.00 0.02 N
ATOM 17 C5 G A2569 -68.610 -57.075 -6.637 1.00 0.02 C
ATOM 18 C6 G A2569 -69.899 -57.112 -6.118 1.00 0.02 C
ATOM 19 O6 G A2569 -70.564 -56.212 -5.584 1.00 0.02 O
ATOM 20 N1 G A2569 -70.408 -58.375 -6.271 1.00 0.02 N
ATOM 21 C2 G A2569 -69.762 -59.439 -6.819 1.00 0.02 C
ATOM 22 N2 G A2569 -70.433 -60.597 -6.844 1.00 0.02 N
ATOM 23 N3 G A2569 -68.559 -59.400 -7.303 1.00 0.02 N
ATOM 24 C4 G A2569 -68.061 -58.198 -7.173 1.00 0.02 C
ATOM 25 P A A2570 -65.769 -63.344 -7.359 1.00 0.01 P
ATOM 26 OP1 A A2570 -66.814 -64.215 -7.929 1.00 0.01 O
ATOM 27 OP2 A A2570 -66.031 -62.641 -6.113 1.00 0.01 O
ATOM 28 O5' A A2570 -64.398 -64.118 -7.240 1.00 0.01 O
TER
ATOM 1 O3' G B2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 2 P U B2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 3 OP1 U B2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 4 OP2 U B2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 5 O5' U B2499 -74.590 -57.433 -4.769 1.00 7.17 O
ATOM 6 C5' U B2499 -75.733 -56.995 -4.077 1.00 7.17 C
ATOM 7 C4' U B2499 -76.145 -55.602 -4.460 1.00 7.17 C
ATOM 8 O4' U B2499 -75.591 -54.653 -3.516 1.00 7.17 O
ATOM 9 C3' U B2499 -75.671 -55.060 -5.805 1.00 7.17 C
ATOM 10 O3' U B2499 -76.389 -55.545 -6.931 1.00 7.17 O
ATOM 11 C2' U B2499 -75.890 -53.590 -5.589 1.00 7.17 C
ATOM 12 O2' U B2499 -77.282 -53.324 -5.559 1.00 7.17 O
ATOM 13 C1' U B2499 -75.357 -53.427 -4.179 1.00 7.17 C
ATOM 14 N1 U B2499 -73.882 -53.104 -4.176 1.00 7.71 N
ATOM 15 C2 U B2499 -73.520 -51.787 -4.527 1.00 7.71 C
ATOM 16 O2 U B2499 -74.284 -50.887 -4.807 1.00 7.71 O
ATOM 17 N3 U B2499 -72.192 -51.502 -4.545 1.00 7.71 N
ATOM 18 C4 U B2499 -71.153 -52.352 -4.250 1.00 7.71 C
ATOM 19 O4 U B2499 -70.008 -51.872 -4.316 1.00 7.71 O
ATOM 20 C5 U B2499 -71.550 -53.700 -3.898 1.00 7.71 C
ATOM 21 C6 U B2499 -72.866 -54.022 -3.883 1.00 7.71 C
ATOM 22 P C B2500 -75.882 -55.165 -8.416 1.00 0.01 P
ATOM 23 OP1 C B2500 -75.931 -56.387 -9.208 1.00 0.01 O
ATOM 24 OP2 C B2500 -74.591 -54.502 -8.261 1.00 0.01 O
ATOM 25 O5' C B2500 -76.959 -54.115 -8.957 1.00 0.01 O
TER
ATOM 2 P G A2569 -69.579 -61.693 -10.219 1.00 0.01 P
ATOM 3 OP1 G A2569 -69.374 -62.747 -9.192 1.00 0.01 O
ATOM 4 OP2 G A2569 -70.877 -61.049 -10.310 1.00 0.01 O
ATOM 5 O5' G A2569 -68.466 -60.583 -10.119 1.00 0.01 O
ATOM 6 C5' G A2569 -67.214 -60.754 -10.732 1.00 0.01 C
ATOM 7 C4' G A2569 -66.123 -60.362 -9.801 1.00 0.01 C
ATOM 8 O4' G A2569 -66.252 -58.981 -9.521 1.00 0.01 O
ATOM 9 C3' G A2569 -66.159 -61.033 -8.449 1.00 0.01 C
ATOM 10 O3' G A2569 -65.450 -62.244 -8.441 1.00 0.01 O
ATOM 11 C2' G A2569 -65.581 -60.002 -7.496 1.00 0.01 C
ATOM 12 O2' G A2569 -64.192 -60.191 -7.331 1.00 0.01 O
ATOM 13 C1' G A2569 -65.814 -58.694 -8.227 1.00 0.01 C
ATOM 14 N9 G A2569 -66.820 -57.855 -7.572 1.00 0.02 N
ATOM 15 C8 G A2569 -66.683 -56.530 -7.279 1.00 0.02 C
ATOM 16 N7 G A2569 -67.736 -56.016 -6.701 1.00 0.02 N
ATOM 17 C5 G A2569 -68.610 -57.075 -6.637 1.00 0.02 C
ATOM 18 C6 G A2569 -69.899 -57.112 -6.118 1.00 0.02 C
ATOM 19 O6 G A2569 -70.564 -56.212 -5.584 1.00 0.02 O
ATOM 20 N1 G A2569 -70.408 -58.375 -6.271 1.00 0.02 N
ATOM 21 C2 G A2569 -69.762 -59.439 -6.819 1.00 0.02 C
ATOM 22 N2 G A2569 -70.433 -60.597 -6.844 1.00 0.02 N
ATOM 23 N3 G A2569 -68.559 -59.400 -7.303 1.00 0.02 N
ATOM 24 C4 G A2569 -68.061 -58.198 -7.173 1.00 0.02 C
ATOM 25 P A A2570 -65.769 -63.344 -7.359 1.00 0.01 P
ATOM 26 OP1 A A2570 -66.814 -64.215 -7.929 1.00 0.01 O
ATOM 27 OP2 A A2570 -66.031 -62.641 -6.113 1.00 0.01 O
ATOM 28 O5' A A2570 -64.398 -64.118 -7.240 1.00 0.01 O
TER
ATOM 1 O3' G B2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 2 P U B2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 3 OP1 U B2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 4 OP2 U B2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 5 O5' U B2499 -74.590 -57.433 -4.769 1.00 7.17 O
ATOM 6 C5' U B2499 -75.733 -56.995 -4.077 1.00 7.17 C
ATOM 7 C4' U B2499 -76.145 -55.602 -4.460 1.00 7.17 C
ATOM 8 O4' U B2499 -75.591 -54.653 -3.516 1.00 7.17 O
ATOM 9 C3' U B2499 -75.671 -55.060 -5.805 1.00 7.17 C
ATOM 10 O3' U B2499 -76.389 -55.545 -6.931 1.00 7.17 O
ATOM 11 C2' U B2499 -75.890 -53.590 -5.589 1.00 7.17 C
ATOM 12 O2' U B2499 -77.282 -53.324 -5.559 1.00 7.17 O
ATOM 13 C1' U B2499 -75.357 -53.427 -4.179 1.00 7.17 C
ATOM 14 N1 U B2499 -73.882 -53.104 -4.176 1.00 7.71 N
ATOM 15 C2 U B2499 -73.520 -51.787 -4.527 1.00 7.71 C
ATOM 16 O2 U B2499 -74.284 -50.887 -4.807 1.00 7.71 O
ATOM 17 N3 U B2499 -72.192 -51.502 -4.545 1.00 7.71 N
ATOM 18 C4 U B2499 -71.153 -52.352 -4.250 1.00 7.71 C
ATOM 19 O4 U B2499 -70.008 -51.872 -4.316 1.00 7.71 O
ATOM 20 C5 U B2499 -71.550 -53.700 -3.898 1.00 7.71 C
ATOM 21 C6 U B2499 -72.866 -54.022 -3.883 1.00 7.71 C
ATOM 22 P C B2500 -75.882 -55.165 -8.416 1.00 0.01 P
ATOM 23 OP1 C B2500 -75.931 -56.387 -9.208 1.00 0.01 O
ATOM 24 OP2 C B2500 -74.591 -54.502 -8.261 1.00 0.01 O
ATOM 25 O5' C B2500 -76.959 -54.115 -8.957 1.00 0.01 O
TER
Atoms:
OP1: (-69.374,-62.747,-9.192)
OP2: (-70.877,-61.049,-10.310)
C3': (-66.159,-61.033,-8.449)
C1': (-65.814,-58.694,-8.227)
C5': (-67.214,-60.754,-10.732)
O6: (-70.564,-56.212,-5.584)
O4': (-66.252,-58.981,-9.521)
C8: (-66.683,-56.530,-7.279)
C2: (-69.762,-59.439,-6.819)
C6: (-69.899,-57.112,-6.118)
C5: (-68.610,-57.075,-6.637)
C4: (-68.061,-58.198,-7.173)
P: (-69.579,-61.693,-10.219)
C4': (-66.123,-60.362,-9.801)
C2': (-65.581,-60.002,-7.496)
O2': (-64.192,-60.191,-7.331)
N1: (-70.408,-58.375,-6.271)
N2: (-70.433,-60.597,-6.844)
N3: (-68.559,-59.400,-7.303)
N7: (-67.736,-56.016,-6.701)
N9: (-66.820,-57.855,-7.572)
O5': (-68.466,-60.583,-10.119)
O3': (-65.450,-62.244,-8.441)
OP2: (-70.877,-61.049,-10.310)
C3': (-66.159,-61.033,-8.449)
C1': (-65.814,-58.694,-8.227)
C5': (-67.214,-60.754,-10.732)
O6: (-70.564,-56.212,-5.584)
O4': (-66.252,-58.981,-9.521)
C8: (-66.683,-56.530,-7.279)
C2: (-69.762,-59.439,-6.819)
C6: (-69.899,-57.112,-6.118)
C5: (-68.610,-57.075,-6.637)
C4: (-68.061,-58.198,-7.173)
P: (-69.579,-61.693,-10.219)
C4': (-66.123,-60.362,-9.801)
C2': (-65.581,-60.002,-7.496)
O2': (-64.192,-60.191,-7.331)
N1: (-70.408,-58.375,-6.271)
N2: (-70.433,-60.597,-6.844)
N3: (-68.559,-59.400,-7.303)
N7: (-67.736,-56.016,-6.701)
N9: (-66.820,-57.855,-7.572)
O5': (-68.466,-60.583,-10.119)
O3': (-65.450,-62.244,-8.441)
C4: (-71.153,-52.352,-4.250)
N3: (-72.192,-51.502,-4.545)
OP1: (-75.536,-59.726,-5.110)
OP2: (-73.103,-59.248,-5.710)
C2: (-73.520,-51.787,-4.527)
C1': (-75.357,-53.427,-4.179)
C3': (-75.671,-55.060,-5.805)
O5': (-74.590,-57.433,-4.769)
O4': (-75.591,-54.653,-3.516)
C5': (-75.733,-56.995,-4.077)
P: (-74.278,-58.989,-4.840)
C4': (-76.145,-55.602,-4.460)
C2': (-75.890,-53.590,-5.589)
O2': (-77.282,-53.324,-5.559)
N1: (-73.882,-53.104,-4.176)
O4: (-70.008,-51.872,-4.316)
O2: (-74.284,-50.887,-4.807)
C6: (-72.866,-54.022,-3.883)
C5: (-71.550,-53.700,-3.898)
O3': (-76.389,-55.545,-6.931)
N3: (-72.192,-51.502,-4.545)
OP1: (-75.536,-59.726,-5.110)
OP2: (-73.103,-59.248,-5.710)
C2: (-73.520,-51.787,-4.527)
C1': (-75.357,-53.427,-4.179)
C3': (-75.671,-55.060,-5.805)
O5': (-74.590,-57.433,-4.769)
O4': (-75.591,-54.653,-3.516)
C5': (-75.733,-56.995,-4.077)
P: (-74.278,-58.989,-4.840)
C4': (-76.145,-55.602,-4.460)
C2': (-75.890,-53.590,-5.589)
O2': (-77.282,-53.324,-5.559)
N1: (-73.882,-53.104,-4.176)
O4: (-70.008,-51.872,-4.316)
O2: (-74.284,-50.887,-4.807)
C6: (-72.866,-54.022,-3.883)
C5: (-71.550,-53.700,-3.898)
O3': (-76.389,-55.545,-6.931)
Image (generated by PyMOL):