Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A924:X11
Extra
PDB:
ATOM 1 O3' G A 923 -99.917 33.440 0.223 1.00 13.01 O
ATOM 2 P G A 924 -100.506 34.199 1.516 1.00 7.43 P
ATOM 3 OP1 G A 924 -101.994 34.065 1.476 1.00 7.43 O
ATOM 4 OP2 G A 924 -99.906 35.553 1.520 1.00 7.43 O
ATOM 5 O5' G A 924 -99.922 33.366 2.742 1.00 7.43 O
ATOM 6 C5' G A 924 -98.698 33.743 3.361 1.00 7.43 C
ATOM 7 C4' G A 924 -98.082 32.576 4.070 1.00 7.43 C
ATOM 8 O4' G A 924 -99.028 31.472 4.081 1.00 7.43 O
ATOM 9 C3' G A 924 -96.833 31.971 3.436 1.00 7.43 C
ATOM 10 O3' G A 924 -95.646 32.675 3.740 1.00 7.43 O
ATOM 11 C2' G A 924 -96.833 30.581 4.025 1.00 7.43 C
ATOM 12 O2' G A 924 -96.346 30.616 5.363 1.00 7.43 O
ATOM 13 C1' G A 924 -98.323 30.253 4.050 1.00 7.43 C
ATOM 14 N9 G A 924 -98.722 29.486 2.864 1.00 7.44 N
ATOM 15 C8 G A 924 -99.230 29.902 1.657 1.00 7.44 C
ATOM 16 N7 G A 924 -99.454 28.910 0.811 1.00 7.44 N
ATOM 17 C5 G A 924 -99.055 27.780 1.505 1.00 7.44 C
ATOM 18 C6 G A 924 -99.044 26.413 1.122 1.00 7.44 C
ATOM 19 O6 G A 924 -99.395 25.878 0.065 1.00 7.44 O
ATOM 20 N1 G A 924 -98.554 25.611 2.131 1.00 7.44 N
ATOM 21 C2 G A 924 -98.123 26.060 3.349 1.00 7.44 C
ATOM 22 N2 G A 924 -97.679 25.095 4.181 1.00 7.44 N
ATOM 23 N3 G A 924 -98.118 27.339 3.725 1.00 7.44 N
ATOM 24 C4 G A 924 -98.595 28.131 2.760 1.00 7.44 C
ATOM 25 P G A 925 -95.134 33.847 2.786 1.00 13.17 P
ATOM 26 OP1 G A 925 -95.352 33.427 1.401 1.00 13.17 O
ATOM 27 OP2 G A 925 -93.760 34.188 3.207 1.00 13.17 O
ATOM 28 O5' G A 925 -96.129 35.028 3.146 1.00 13.17 O
TER
ATOM 1 O3' A B 10 -99.805 20.854 3.522 1.00 43.26 O
ATOM 2 P U B 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 3 OP1 U B 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 4 OP2 U B 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 5 O5' U B 11 -98.999 20.839 1.157 1.00 6.16 O
ATOM 6 C5' U B 11 -98.125 19.738 1.115 1.00 6.16 C
ATOM 7 C4' U B 11 -98.716 18.596 0.349 1.00 6.16 C
ATOM 8 O4' U B 11 -99.761 17.966 1.120 1.00 6.16 O
ATOM 9 C3' U B 11 -99.408 18.948 -0.943 1.00 6.16 C
ATOM 10 O3' U B 11 -98.514 19.202 -1.997 1.00 6.16 O
ATOM 11 C2' U B 11 -100.257 17.723 -1.155 1.00 6.16 C
ATOM 12 O2' U B 11 -99.443 16.610 -1.498 1.00 6.16 O
ATOM 13 C1' U B 11 -100.768 17.508 0.254 1.00 6.16 C
ATOM 14 N1 U B 11 -101.998 18.280 0.511 1.00 6.42 N
ATOM 15 C2 U B 11 -103.180 17.890 -0.097 1.00 6.42 C
ATOM 16 O2 U B 11 -103.306 16.939 -0.861 1.00 6.42 O
ATOM 17 N3 U B 11 -104.260 18.667 0.211 1.00 6.42 N
ATOM 18 C4 U B 11 -104.306 19.749 1.035 1.00 6.42 C
ATOM 19 O4 U B 11 -105.380 20.318 1.192 1.00 6.42 O
ATOM 20 C5 U B 11 -103.070 20.087 1.637 1.00 6.42 C
ATOM 21 C6 U B 11 -101.991 19.357 1.349 1.00 6.42 C
ATOM 22 P U B 12 -98.868 20.310 -3.080 1.00 6.94 P
ATOM 23 OP1 U B 12 -97.625 20.639 -3.781 1.00 6.94 O
ATOM 24 OP2 U B 12 -99.614 21.391 -2.392 1.00 6.94 O
ATOM 25 O5' U B 12 -99.836 19.549 -4.044 1.00 6.94 O
TER
ATOM 2 P G A 924 -100.506 34.199 1.516 1.00 7.43 P
ATOM 3 OP1 G A 924 -101.994 34.065 1.476 1.00 7.43 O
ATOM 4 OP2 G A 924 -99.906 35.553 1.520 1.00 7.43 O
ATOM 5 O5' G A 924 -99.922 33.366 2.742 1.00 7.43 O
ATOM 6 C5' G A 924 -98.698 33.743 3.361 1.00 7.43 C
ATOM 7 C4' G A 924 -98.082 32.576 4.070 1.00 7.43 C
ATOM 8 O4' G A 924 -99.028 31.472 4.081 1.00 7.43 O
ATOM 9 C3' G A 924 -96.833 31.971 3.436 1.00 7.43 C
ATOM 10 O3' G A 924 -95.646 32.675 3.740 1.00 7.43 O
ATOM 11 C2' G A 924 -96.833 30.581 4.025 1.00 7.43 C
ATOM 12 O2' G A 924 -96.346 30.616 5.363 1.00 7.43 O
ATOM 13 C1' G A 924 -98.323 30.253 4.050 1.00 7.43 C
ATOM 14 N9 G A 924 -98.722 29.486 2.864 1.00 7.44 N
ATOM 15 C8 G A 924 -99.230 29.902 1.657 1.00 7.44 C
ATOM 16 N7 G A 924 -99.454 28.910 0.811 1.00 7.44 N
ATOM 17 C5 G A 924 -99.055 27.780 1.505 1.00 7.44 C
ATOM 18 C6 G A 924 -99.044 26.413 1.122 1.00 7.44 C
ATOM 19 O6 G A 924 -99.395 25.878 0.065 1.00 7.44 O
ATOM 20 N1 G A 924 -98.554 25.611 2.131 1.00 7.44 N
ATOM 21 C2 G A 924 -98.123 26.060 3.349 1.00 7.44 C
ATOM 22 N2 G A 924 -97.679 25.095 4.181 1.00 7.44 N
ATOM 23 N3 G A 924 -98.118 27.339 3.725 1.00 7.44 N
ATOM 24 C4 G A 924 -98.595 28.131 2.760 1.00 7.44 C
ATOM 25 P G A 925 -95.134 33.847 2.786 1.00 13.17 P
ATOM 26 OP1 G A 925 -95.352 33.427 1.401 1.00 13.17 O
ATOM 27 OP2 G A 925 -93.760 34.188 3.207 1.00 13.17 O
ATOM 28 O5' G A 925 -96.129 35.028 3.146 1.00 13.17 O
TER
ATOM 1 O3' A B 10 -99.805 20.854 3.522 1.00 43.26 O
ATOM 2 P U B 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 3 OP1 U B 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 4 OP2 U B 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 5 O5' U B 11 -98.999 20.839 1.157 1.00 6.16 O
ATOM 6 C5' U B 11 -98.125 19.738 1.115 1.00 6.16 C
ATOM 7 C4' U B 11 -98.716 18.596 0.349 1.00 6.16 C
ATOM 8 O4' U B 11 -99.761 17.966 1.120 1.00 6.16 O
ATOM 9 C3' U B 11 -99.408 18.948 -0.943 1.00 6.16 C
ATOM 10 O3' U B 11 -98.514 19.202 -1.997 1.00 6.16 O
ATOM 11 C2' U B 11 -100.257 17.723 -1.155 1.00 6.16 C
ATOM 12 O2' U B 11 -99.443 16.610 -1.498 1.00 6.16 O
ATOM 13 C1' U B 11 -100.768 17.508 0.254 1.00 6.16 C
ATOM 14 N1 U B 11 -101.998 18.280 0.511 1.00 6.42 N
ATOM 15 C2 U B 11 -103.180 17.890 -0.097 1.00 6.42 C
ATOM 16 O2 U B 11 -103.306 16.939 -0.861 1.00 6.42 O
ATOM 17 N3 U B 11 -104.260 18.667 0.211 1.00 6.42 N
ATOM 18 C4 U B 11 -104.306 19.749 1.035 1.00 6.42 C
ATOM 19 O4 U B 11 -105.380 20.318 1.192 1.00 6.42 O
ATOM 20 C5 U B 11 -103.070 20.087 1.637 1.00 6.42 C
ATOM 21 C6 U B 11 -101.991 19.357 1.349 1.00 6.42 C
ATOM 22 P U B 12 -98.868 20.310 -3.080 1.00 6.94 P
ATOM 23 OP1 U B 12 -97.625 20.639 -3.781 1.00 6.94 O
ATOM 24 OP2 U B 12 -99.614 21.391 -2.392 1.00 6.94 O
ATOM 25 O5' U B 12 -99.836 19.549 -4.044 1.00 6.94 O
TER
Atoms:
OP1: (-101.994,34.065,1.476)
OP2: (-99.906,35.553,1.520)
C3': (-96.833,31.971,3.436)
C1': (-98.323,30.253,4.050)
C5': (-98.698,33.743,3.361)
O6: (-99.395,25.878,0.065)
O4': (-99.028,31.472,4.081)
C8: (-99.230,29.902,1.657)
C2: (-98.123,26.060,3.349)
C6: (-99.044,26.413,1.122)
C5: (-99.055,27.780,1.505)
C4: (-98.595,28.131,2.760)
P: (-100.506,34.199,1.516)
C4': (-98.082,32.576,4.070)
C2': (-96.833,30.581,4.025)
O2': (-96.346,30.616,5.363)
N1: (-98.554,25.611,2.131)
N2: (-97.679,25.095,4.181)
N3: (-98.118,27.339,3.725)
N7: (-99.454,28.910,0.811)
N9: (-98.722,29.486,2.864)
O5': (-99.922,33.366,2.742)
O3': (-95.646,32.675,3.740)
OP2: (-99.906,35.553,1.520)
C3': (-96.833,31.971,3.436)
C1': (-98.323,30.253,4.050)
C5': (-98.698,33.743,3.361)
O6: (-99.395,25.878,0.065)
O4': (-99.028,31.472,4.081)
C8: (-99.230,29.902,1.657)
C2: (-98.123,26.060,3.349)
C6: (-99.044,26.413,1.122)
C5: (-99.055,27.780,1.505)
C4: (-98.595,28.131,2.760)
P: (-100.506,34.199,1.516)
C4': (-98.082,32.576,4.070)
C2': (-96.833,30.581,4.025)
O2': (-96.346,30.616,5.363)
N1: (-98.554,25.611,2.131)
N2: (-97.679,25.095,4.181)
N3: (-98.118,27.339,3.725)
N7: (-99.454,28.910,0.811)
N9: (-98.722,29.486,2.864)
O5': (-99.922,33.366,2.742)
O3': (-95.646,32.675,3.740)
C4: (-104.306,19.749,1.035)
N3: (-104.260,18.667,0.211)
OP1: (-97.687,22.015,2.959)
OP2: (-99.971,22.940,2.185)
C2: (-103.180,17.890,-0.097)
C1': (-100.768,17.508,0.254)
C3': (-99.408,18.948,-0.943)
O5': (-98.999,20.839,1.157)
O4': (-99.761,17.966,1.120)
C5': (-98.125,19.738,1.115)
P: (-99.065,21.768,2.447)
C4': (-98.716,18.596,0.349)
C2': (-100.257,17.723,-1.155)
O2': (-99.443,16.610,-1.498)
N1: (-101.998,18.280,0.511)
O4: (-105.380,20.318,1.192)
O2: (-103.306,16.939,-0.861)
C6: (-101.991,19.357,1.349)
C5: (-103.070,20.087,1.637)
O3': (-98.514,19.202,-1.997)
N3: (-104.260,18.667,0.211)
OP1: (-97.687,22.015,2.959)
OP2: (-99.971,22.940,2.185)
C2: (-103.180,17.890,-0.097)
C1': (-100.768,17.508,0.254)
C3': (-99.408,18.948,-0.943)
O5': (-98.999,20.839,1.157)
O4': (-99.761,17.966,1.120)
C5': (-98.125,19.738,1.115)
P: (-99.065,21.768,2.447)
C4': (-98.716,18.596,0.349)
C2': (-100.257,17.723,-1.155)
O2': (-99.443,16.610,-1.498)
N1: (-101.998,18.280,0.511)
O4: (-105.380,20.318,1.192)
O2: (-103.306,16.939,-0.861)
C6: (-101.991,19.357,1.349)
C5: (-103.070,20.087,1.637)
O3': (-98.514,19.202,-1.997)
Image (generated by PyMOL):