ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A2569:A2561

Extra

PDB:
ATOM 1 O3' G A2568 97.275 -41.830 53.888 1.00 83.36 O
ATOM 2 P G A2569 96.315 -43.091 54.187 1.00 93.75 P
ATOM 3 OP1 G A2569 95.763 -43.605 52.904 1.00 80.93 O
ATOM 4 OP2 G A2569 95.385 -42.645 55.263 1.00 92.82 O
ATOM 5 O5' G A2569 97.283 -44.210 54.791 1.00 85.50 O
ATOM 6 C5' G A2569 98.130 -44.997 53.948 1.00 83.12 C
ATOM 7 C4' G A2569 98.902 -45.989 54.782 1.00 75.31 C
ATOM 8 O4' G A2569 99.746 -45.260 55.710 1.00 78.31 O
ATOM 9 C3' G A2569 98.026 -46.826 55.683 1.00 73.34 C
ATOM 10 O3' G A2569 97.465 -47.949 55.048 1.00 71.79 O
ATOM 11 C2' G A2569 98.952 -47.194 56.825 1.00 73.77 C
ATOM 12 O2' G A2569 99.781 -48.285 56.521 1.00 73.60 O
ATOM 13 C1' G A2569 99.773 -45.918 56.969 1.00 77.04 C
ATOM 14 N9 G A2569 99.156 -45.047 57.970 1.00 81.61 N
ATOM 15 C8 G A2569 98.366 -43.947 57.732 1.00 82.41 C
ATOM 16 N7 G A2569 97.864 -43.432 58.820 1.00 85.42 N
ATOM 17 C5 G A2569 98.369 -44.221 59.848 1.00 88.14 C
ATOM 18 C6 G A2569 98.161 -44.150 61.257 1.00 90.74 C
ATOM 19 O6 G A2569 97.446 -43.361 61.892 1.00 96.80 O
ATOM 20 N1 G A2569 98.881 -45.131 61.936 1.00 90.45 N
ATOM 21 C2 G A2569 99.689 -46.067 61.343 1.00 89.62 C
ATOM 22 N2 G A2569 100.304 -46.930 62.172 1.00 83.00 N
ATOM 23 N3 G A2569 99.882 -46.153 60.030 1.00 90.80 N
ATOM 24 C4 G A2569 99.194 -45.205 59.347 1.00 87.48 C
ATOM 25 P A A2570 96.228 -48.685 55.745 1.00 77.80 P
ATOM 26 OP1 A A2570 95.603 -49.576 54.739 1.00 76.16 O
ATOM 27 OP2 A A2570 95.410 -47.623 56.399 1.00 72.68 O
ATOM 28 O5' A A2570 96.916 -49.587 56.866 1.00 67.98 O
TER

ATOM 1 O3' G B2560 97.949 -46.379 66.737 1.00 91.13 O
ATOM 2 P U B2561 99.405 -45.819 66.297 1.00 94.94 P
ATOM 3 OP1 U B2561 99.812 -44.637 67.105 1.00 88.48 O
ATOM 4 OP2 U B2561 99.360 -45.711 64.816 1.00 92.31 O
ATOM 5 O5' U B2561 100.407 -47.020 66.612 1.00 82.74 O
ATOM 6 C5' U B2561 100.308 -47.756 67.821 1.00 76.61 C
ATOM 7 C4' U B2561 100.273 -49.234 67.536 1.00 74.73 C
ATOM 8 O4' U B2561 99.074 -49.558 66.793 1.00 77.24 O
ATOM 9 C3' U B2561 101.394 -49.812 66.698 1.00 72.60 C
ATOM 10 O3' U B2561 102.504 -50.090 67.513 1.00 73.22 O
ATOM 11 C2' U B2561 100.782 -51.092 66.168 1.00 76.00 C
ATOM 12 O2' U B2561 100.792 -52.104 67.153 1.00 64.05 O
ATOM 13 C1' U B2561 99.333 -50.656 65.933 1.00 77.28 C
ATOM 14 N1 U B2561 99.007 -50.264 64.546 1.00 78.54 N
ATOM 15 C2 U B2561 99.484 -51.041 63.469 1.00 77.82 C
ATOM 16 O2 U B2561 100.220 -52.018 63.603 1.00 73.89 O
ATOM 17 N3 U B2561 99.073 -50.620 62.230 1.00 78.08 N
ATOM 18 C4 U B2561 98.285 -49.531 61.949 1.00 82.44 C
ATOM 19 O4 U B2561 98.001 -49.277 60.776 1.00 83.65 O
ATOM 20 C5 U B2561 97.868 -48.782 63.092 1.00 84.12 C
ATOM 21 C6 U B2561 98.233 -49.163 64.313 1.00 80.51 C
ATOM 22 P A B2562 103.953 -49.620 67.040 1.00 76.56 P
ATOM 23 OP1 A B2562 104.852 -49.885 68.200 1.00 79.50 O
ATOM 24 OP2 A B2562 103.869 -48.252 66.445 1.00 78.89 O
ATOM 25 O5' A B2562 104.324 -50.635 65.878 1.00 72.13 O
TER

Atoms:
OP1: (95.763,-43.605,52.904)
OP2: (95.385,-42.645,55.263)
C3': (98.026,-46.826,55.683)
C1': (99.773,-45.918,56.969)
C5': (98.130,-44.997,53.948)
O6: (97.446,-43.361,61.892)
O4': (99.746,-45.260,55.710)
C8: (98.366,-43.947,57.732)
C2: (99.689,-46.067,61.343)
C6: (98.161,-44.150,61.257)
C5: (98.369,-44.221,59.848)
C4: (99.194,-45.205,59.347)
P: (96.315,-43.091,54.187)
C4': (98.902,-45.989,54.782)
C2': (98.952,-47.194,56.825)
O2': (99.781,-48.285,56.521)
N1: (98.881,-45.131,61.936)
N2: (100.304,-46.930,62.172)
N3: (99.882,-46.153,60.030)
N7: (97.864,-43.432,58.820)
N9: (99.156,-45.047,57.970)
O5': (97.283,-44.210,54.791)
O3': (97.465,-47.949,55.048)
C4: (98.285,-49.531,61.949)
N3: (99.073,-50.620,62.230)
OP1: (99.812,-44.637,67.105)
OP2: (99.360,-45.711,64.816)
C2: (99.484,-51.041,63.469)
C1': (99.333,-50.656,65.933)
C3': (101.394,-49.812,66.698)
O5': (100.407,-47.020,66.612)
O4': (99.074,-49.558,66.793)
C5': (100.308,-47.756,67.821)
P: (99.405,-45.819,66.297)
C4': (100.273,-49.234,67.536)
C2': (100.782,-51.092,66.168)
O2': (100.792,-52.104,67.153)
N1: (99.007,-50.264,64.546)
O4: (98.001,-49.277,60.776)
O2: (100.220,-52.018,63.603)
C6: (98.233,-49.163,64.313)
C5: (97.868,-48.782,63.092)
O3': (102.504,-50.090,67.513)
Image (generated by PyMOL):
PyMOL image
show in jmol