Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1313:A1327
Extra
PDB:
ATOM 1 O3' U A1312 40.092 -36.557 -50.574 1.00 55.82 O
ATOM 2 P G A1313 41.032 -36.215 -51.837 1.00 51.64 P
ATOM 3 OP1 G A1313 41.072 -37.408 -52.730 1.00 50.60 O
ATOM 4 OP2 G A1313 42.304 -35.665 -51.281 1.00 50.97 O
ATOM 5 O5' G A1313 40.279 -35.025 -52.592 1.00 53.01 O
ATOM 6 C5' G A1313 39.056 -35.236 -53.287 1.00 50.77 C
ATOM 7 C4' G A1313 38.422 -33.905 -53.617 1.00 59.53 C
ATOM 8 O4' G A1313 38.067 -33.228 -52.382 1.00 53.97 O
ATOM 9 C3' G A1313 39.322 -32.941 -54.376 1.00 61.98 C
ATOM 10 O3' G A1313 39.160 -33.152 -55.779 1.00 63.87 O
ATOM 11 C2' G A1313 38.818 -31.575 -53.915 1.00 56.48 C
ATOM 12 O2' G A1313 37.686 -31.147 -54.648 1.00 57.85 O
ATOM 13 C1' G A1313 38.419 -31.865 -52.461 1.00 54.41 C
ATOM 14 N9 G A1313 39.507 -31.684 -51.510 1.00 60.46 N
ATOM 15 C8 G A1313 40.406 -32.654 -51.114 1.00 62.62 C
ATOM 16 N7 G A1313 41.285 -32.220 -50.257 1.00 65.56 N
ATOM 17 C5 G A1313 40.951 -30.888 -50.071 1.00 64.49 C
ATOM 18 C6 G A1313 41.549 -29.906 -49.256 1.00 65.74 C
ATOM 19 O6 G A1313 42.520 -30.031 -48.476 1.00 66.19 O
ATOM 20 N1 G A1313 40.907 -28.682 -49.387 1.00 63.10 N
ATOM 21 C2 G A1313 39.822 -28.442 -50.187 1.00 58.23 C
ATOM 22 N2 G A1313 39.372 -27.191 -50.188 1.00 63.39 N
ATOM 23 N3 G A1313 39.234 -29.353 -50.933 1.00 57.09 N
ATOM 24 C4 G A1313 39.850 -30.543 -50.837 1.00 62.10 C
ATOM 25 P A A1314 40.204 -32.521 -56.828 1.00 72.84 P
ATOM 26 OP1 A A1314 40.813 -33.626 -57.606 1.00 71.86 O
ATOM 27 OP2 A A1314 41.082 -31.540 -56.143 1.00 68.73 O
ATOM 28 O5' A A1314 39.259 -31.725 -57.819 1.00 67.43 O
TER
ATOM 1 O3' G B1326 42.469 -23.962 -49.343 1.00 66.58 O
ATOM 2 P U B1327 41.227 -24.152 -48.323 1.00 74.43 P
ATOM 3 OP1 U B1327 41.497 -23.344 -47.098 1.00 75.88 O
ATOM 4 OP2 U B1327 40.914 -25.603 -48.191 1.00 67.16 O
ATOM 5 O5' U B1327 40.032 -23.443 -49.090 1.00 66.78 O
ATOM 6 C5' U B1327 40.040 -22.031 -49.254 1.00 67.44 C
ATOM 7 C4' U B1327 38.924 -21.597 -50.173 1.00 72.57 C
ATOM 8 O4' U B1327 39.258 -21.834 -51.573 1.00 68.66 O
ATOM 9 C3' U B1327 37.590 -22.302 -49.986 1.00 75.18 C
ATOM 10 O3' U B1327 36.872 -21.842 -48.846 1.00 75.75 O
ATOM 11 C2' U B1327 36.892 -22.029 -51.313 1.00 74.40 C
ATOM 12 O2' U B1327 36.281 -20.751 -51.360 1.00 77.76 O
ATOM 13 C1' U B1327 38.064 -22.084 -52.304 1.00 70.71 C
ATOM 14 N1 U B1327 38.150 -23.385 -52.991 1.00 68.96 N
ATOM 15 C2 U B1327 37.259 -23.623 -54.039 1.00 73.33 C
ATOM 16 O2 U B1327 36.407 -22.815 -54.386 1.00 77.03 O
ATOM 17 N3 U B1327 37.393 -24.844 -54.656 1.00 71.99 N
ATOM 18 C4 U B1327 38.292 -25.835 -54.342 1.00 67.89 C
ATOM 19 O4 U B1327 38.405 -26.798 -55.093 1.00 60.60 O
ATOM 20 C5 U B1327 39.151 -25.534 -53.238 1.00 67.02 C
ATOM 21 C6 U B1327 39.061 -24.348 -52.621 1.00 67.85 C
ATOM 22 P A B1328 36.054 -22.901 -47.947 1.00 66.98 P
ATOM 23 OP1 A B1328 35.898 -22.305 -46.589 1.00 52.00 O
ATOM 24 OP2 A B1328 36.710 -24.232 -48.081 1.00 66.93 O
ATOM 25 O5' A B1328 34.633 -22.987 -48.690 1.00 68.76 O
TER
ATOM 2 P G A1313 41.032 -36.215 -51.837 1.00 51.64 P
ATOM 3 OP1 G A1313 41.072 -37.408 -52.730 1.00 50.60 O
ATOM 4 OP2 G A1313 42.304 -35.665 -51.281 1.00 50.97 O
ATOM 5 O5' G A1313 40.279 -35.025 -52.592 1.00 53.01 O
ATOM 6 C5' G A1313 39.056 -35.236 -53.287 1.00 50.77 C
ATOM 7 C4' G A1313 38.422 -33.905 -53.617 1.00 59.53 C
ATOM 8 O4' G A1313 38.067 -33.228 -52.382 1.00 53.97 O
ATOM 9 C3' G A1313 39.322 -32.941 -54.376 1.00 61.98 C
ATOM 10 O3' G A1313 39.160 -33.152 -55.779 1.00 63.87 O
ATOM 11 C2' G A1313 38.818 -31.575 -53.915 1.00 56.48 C
ATOM 12 O2' G A1313 37.686 -31.147 -54.648 1.00 57.85 O
ATOM 13 C1' G A1313 38.419 -31.865 -52.461 1.00 54.41 C
ATOM 14 N9 G A1313 39.507 -31.684 -51.510 1.00 60.46 N
ATOM 15 C8 G A1313 40.406 -32.654 -51.114 1.00 62.62 C
ATOM 16 N7 G A1313 41.285 -32.220 -50.257 1.00 65.56 N
ATOM 17 C5 G A1313 40.951 -30.888 -50.071 1.00 64.49 C
ATOM 18 C6 G A1313 41.549 -29.906 -49.256 1.00 65.74 C
ATOM 19 O6 G A1313 42.520 -30.031 -48.476 1.00 66.19 O
ATOM 20 N1 G A1313 40.907 -28.682 -49.387 1.00 63.10 N
ATOM 21 C2 G A1313 39.822 -28.442 -50.187 1.00 58.23 C
ATOM 22 N2 G A1313 39.372 -27.191 -50.188 1.00 63.39 N
ATOM 23 N3 G A1313 39.234 -29.353 -50.933 1.00 57.09 N
ATOM 24 C4 G A1313 39.850 -30.543 -50.837 1.00 62.10 C
ATOM 25 P A A1314 40.204 -32.521 -56.828 1.00 72.84 P
ATOM 26 OP1 A A1314 40.813 -33.626 -57.606 1.00 71.86 O
ATOM 27 OP2 A A1314 41.082 -31.540 -56.143 1.00 68.73 O
ATOM 28 O5' A A1314 39.259 -31.725 -57.819 1.00 67.43 O
TER
ATOM 1 O3' G B1326 42.469 -23.962 -49.343 1.00 66.58 O
ATOM 2 P U B1327 41.227 -24.152 -48.323 1.00 74.43 P
ATOM 3 OP1 U B1327 41.497 -23.344 -47.098 1.00 75.88 O
ATOM 4 OP2 U B1327 40.914 -25.603 -48.191 1.00 67.16 O
ATOM 5 O5' U B1327 40.032 -23.443 -49.090 1.00 66.78 O
ATOM 6 C5' U B1327 40.040 -22.031 -49.254 1.00 67.44 C
ATOM 7 C4' U B1327 38.924 -21.597 -50.173 1.00 72.57 C
ATOM 8 O4' U B1327 39.258 -21.834 -51.573 1.00 68.66 O
ATOM 9 C3' U B1327 37.590 -22.302 -49.986 1.00 75.18 C
ATOM 10 O3' U B1327 36.872 -21.842 -48.846 1.00 75.75 O
ATOM 11 C2' U B1327 36.892 -22.029 -51.313 1.00 74.40 C
ATOM 12 O2' U B1327 36.281 -20.751 -51.360 1.00 77.76 O
ATOM 13 C1' U B1327 38.064 -22.084 -52.304 1.00 70.71 C
ATOM 14 N1 U B1327 38.150 -23.385 -52.991 1.00 68.96 N
ATOM 15 C2 U B1327 37.259 -23.623 -54.039 1.00 73.33 C
ATOM 16 O2 U B1327 36.407 -22.815 -54.386 1.00 77.03 O
ATOM 17 N3 U B1327 37.393 -24.844 -54.656 1.00 71.99 N
ATOM 18 C4 U B1327 38.292 -25.835 -54.342 1.00 67.89 C
ATOM 19 O4 U B1327 38.405 -26.798 -55.093 1.00 60.60 O
ATOM 20 C5 U B1327 39.151 -25.534 -53.238 1.00 67.02 C
ATOM 21 C6 U B1327 39.061 -24.348 -52.621 1.00 67.85 C
ATOM 22 P A B1328 36.054 -22.901 -47.947 1.00 66.98 P
ATOM 23 OP1 A B1328 35.898 -22.305 -46.589 1.00 52.00 O
ATOM 24 OP2 A B1328 36.710 -24.232 -48.081 1.00 66.93 O
ATOM 25 O5' A B1328 34.633 -22.987 -48.690 1.00 68.76 O
TER
Atoms:
OP1: (41.072,-37.408,-52.730)
OP2: (42.304,-35.665,-51.281)
C3': (39.322,-32.941,-54.376)
C1': (38.419,-31.865,-52.461)
C5': (39.056,-35.236,-53.287)
O6: (42.520,-30.031,-48.476)
O4': (38.067,-33.228,-52.382)
C8: (40.406,-32.654,-51.114)
C2: (39.822,-28.442,-50.187)
C6: (41.549,-29.906,-49.256)
C5: (40.951,-30.888,-50.071)
C4: (39.850,-30.543,-50.837)
P: (41.032,-36.215,-51.837)
C4': (38.422,-33.905,-53.617)
C2': (38.818,-31.575,-53.915)
O2': (37.686,-31.147,-54.648)
N1: (40.907,-28.682,-49.387)
N2: (39.372,-27.191,-50.188)
N3: (39.234,-29.353,-50.933)
N7: (41.285,-32.220,-50.257)
N9: (39.507,-31.684,-51.510)
O5': (40.279,-35.025,-52.592)
O3': (39.160,-33.152,-55.779)
OP2: (42.304,-35.665,-51.281)
C3': (39.322,-32.941,-54.376)
C1': (38.419,-31.865,-52.461)
C5': (39.056,-35.236,-53.287)
O6: (42.520,-30.031,-48.476)
O4': (38.067,-33.228,-52.382)
C8: (40.406,-32.654,-51.114)
C2: (39.822,-28.442,-50.187)
C6: (41.549,-29.906,-49.256)
C5: (40.951,-30.888,-50.071)
C4: (39.850,-30.543,-50.837)
P: (41.032,-36.215,-51.837)
C4': (38.422,-33.905,-53.617)
C2': (38.818,-31.575,-53.915)
O2': (37.686,-31.147,-54.648)
N1: (40.907,-28.682,-49.387)
N2: (39.372,-27.191,-50.188)
N3: (39.234,-29.353,-50.933)
N7: (41.285,-32.220,-50.257)
N9: (39.507,-31.684,-51.510)
O5': (40.279,-35.025,-52.592)
O3': (39.160,-33.152,-55.779)
C4: (38.292,-25.835,-54.342)
N3: (37.393,-24.844,-54.656)
OP1: (41.497,-23.344,-47.098)
OP2: (40.914,-25.603,-48.191)
C2: (37.259,-23.623,-54.039)
C1': (38.064,-22.084,-52.304)
C3': (37.590,-22.302,-49.986)
O5': (40.032,-23.443,-49.090)
O4': (39.258,-21.834,-51.573)
C5': (40.040,-22.031,-49.254)
P: (41.227,-24.152,-48.323)
C4': (38.924,-21.597,-50.173)
C2': (36.892,-22.029,-51.313)
O2': (36.281,-20.751,-51.360)
N1: (38.150,-23.385,-52.991)
O4: (38.405,-26.798,-55.093)
O2: (36.407,-22.815,-54.386)
C6: (39.061,-24.348,-52.621)
C5: (39.151,-25.534,-53.238)
O3': (36.872,-21.842,-48.846)
N3: (37.393,-24.844,-54.656)
OP1: (41.497,-23.344,-47.098)
OP2: (40.914,-25.603,-48.191)
C2: (37.259,-23.623,-54.039)
C1': (38.064,-22.084,-52.304)
C3': (37.590,-22.302,-49.986)
O5': (40.032,-23.443,-49.090)
O4': (39.258,-21.834,-51.573)
C5': (40.040,-22.031,-49.254)
P: (41.227,-24.152,-48.323)
C4': (38.924,-21.597,-50.173)
C2': (36.892,-22.029,-51.313)
O2': (36.281,-20.751,-51.360)
N1: (38.150,-23.385,-52.991)
O4: (38.405,-26.798,-55.093)
O2: (36.407,-22.815,-54.386)
C6: (39.061,-24.348,-52.621)
C5: (39.151,-25.534,-53.238)
O3': (36.872,-21.842,-48.846)
Image (generated by PyMOL):