Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12729:12707
Extra
PDB:
ATOM 1 O3' A A2728 11.073 16.079 79.127 1.00 44.87 O
ATOM 2 P G A2729 12.158 16.587 78.080 1.00 42.80 P
ATOM 3 OP1 G A2729 12.069 18.055 78.004 1.00 43.07 O
ATOM 4 OP2 G A2729 11.985 15.810 76.863 1.00 42.62 O
ATOM 5 O5' G A2729 13.513 16.184 78.772 1.00 42.60 O
ATOM 6 C5' G A2729 14.635 15.796 77.999 1.00 42.33 C
ATOM 7 C4' G A2729 15.528 14.880 78.787 1.00 42.13 C
ATOM 8 O4' G A2729 14.766 13.728 79.225 1.00 42.07 O
ATOM 9 C3' G A2729 16.722 14.324 78.023 1.00 41.84 C
ATOM 10 O3' G A2729 17.862 15.130 78.181 1.00 41.85 O
ATOM 11 C2' G A2729 16.889 12.937 78.588 1.00 41.65 C
ATOM 12 O2' G A2729 17.596 12.991 79.796 1.00 41.67 O
ATOM 13 C1' G A2729 15.441 12.554 78.874 1.00 41.78 C
ATOM 14 N9 G A2729 14.812 12.049 77.656 1.00 41.70 N
ATOM 15 C8 G A2729 13.938 12.751 76.876 1.00 41.87 C
ATOM 16 N7 G A2729 13.663 12.057 75.827 1.00 41.75 N
ATOM 17 C5 G A2729 14.393 10.870 75.921 1.00 41.49 C
ATOM 18 C6 G A2729 14.525 9.730 75.075 1.00 41.28 C
ATOM 19 O6 G A2729 13.945 9.497 74.022 1.00 41.28 O
ATOM 20 N1 G A2729 15.380 8.743 75.524 1.00 41.07 N
ATOM 21 C2 G A2729 16.033 8.874 76.685 1.00 41.07 C
ATOM 22 N2 G A2729 16.812 7.857 76.994 1.00 40.87 N
ATOM 23 N3 G A2729 15.940 9.923 77.480 1.00 41.26 N
ATOM 24 C4 G A2729 15.114 10.869 77.045 1.00 41.46 C
ATOM 25 P U A2730 18.752 15.524 76.928 1.00 56.42 P
ATOM 26 OP1 U A2730 18.022 16.562 76.178 1.00 56.63 O
ATOM 27 OP2 U A2730 19.075 14.298 76.247 1.00 56.14 O
ATOM 28 O5' U A2730 20.079 16.108 77.605 1.00 56.42 O
TER
ATOM 1 O3' U B2706 17.149 5.332 72.334 1.00 80.62 O
ATOM 2 P U B2707 16.690 5.134 73.851 1.00 49.17 P
ATOM 3 OP1 U B2707 15.538 4.172 73.890 1.00 49.22 O
ATOM 4 OP2 U B2707 16.475 6.496 74.408 1.00 49.36 O
ATOM 5 O5' U B2707 17.972 4.466 74.501 1.00 48.99 O
ATOM 6 C5' U B2707 18.208 3.067 74.389 1.00 48.83 C
ATOM 7 C4' U B2707 19.019 2.577 75.543 1.00 48.76 C
ATOM 8 O4' U B2707 20.261 3.328 75.595 1.00 48.70 O
ATOM 9 C3' U B2707 18.411 2.823 76.902 1.00 48.91 C
ATOM 10 O3' U B2707 17.453 1.869 77.270 1.00 48.96 O
ATOM 11 C2' U B2707 19.622 2.819 77.792 1.00 48.84 C
ATOM 12 O2' U B2707 20.111 1.489 77.933 1.00 48.70 O
ATOM 13 C1' U B2707 20.591 3.615 76.927 1.00 48.76 C
ATOM 14 N1 U B2707 20.444 5.077 77.141 1.00 48.93 N
ATOM 15 C2 U B2707 20.848 5.573 78.364 1.00 49.02 C
ATOM 16 O2 U B2707 21.298 4.838 79.232 1.00 48.97 O
ATOM 17 N3 U B2707 20.695 6.931 78.561 1.00 49.19 N
ATOM 18 C4 U B2707 20.148 7.823 77.656 1.00 49.28 C
ATOM 19 O4 U B2707 20.045 9.020 77.981 1.00 49.46 O
ATOM 20 C5 U B2707 19.749 7.234 76.405 1.00 49.18 C
ATOM 21 C6 U B2707 19.909 5.924 76.201 1.00 49.01 C
ATOM 22 P A B2708 16.373 2.249 78.400 1.00 39.17 P
ATOM 23 OP1 A B2708 15.615 1.009 78.747 1.00 39.18 O
ATOM 24 OP2 A B2708 15.644 3.344 77.904 1.00 39.31 O
ATOM 25 O5' A B2708 17.279 2.722 79.625 1.00 39.19 O
TER
ATOM 2 P G A2729 12.158 16.587 78.080 1.00 42.80 P
ATOM 3 OP1 G A2729 12.069 18.055 78.004 1.00 43.07 O
ATOM 4 OP2 G A2729 11.985 15.810 76.863 1.00 42.62 O
ATOM 5 O5' G A2729 13.513 16.184 78.772 1.00 42.60 O
ATOM 6 C5' G A2729 14.635 15.796 77.999 1.00 42.33 C
ATOM 7 C4' G A2729 15.528 14.880 78.787 1.00 42.13 C
ATOM 8 O4' G A2729 14.766 13.728 79.225 1.00 42.07 O
ATOM 9 C3' G A2729 16.722 14.324 78.023 1.00 41.84 C
ATOM 10 O3' G A2729 17.862 15.130 78.181 1.00 41.85 O
ATOM 11 C2' G A2729 16.889 12.937 78.588 1.00 41.65 C
ATOM 12 O2' G A2729 17.596 12.991 79.796 1.00 41.67 O
ATOM 13 C1' G A2729 15.441 12.554 78.874 1.00 41.78 C
ATOM 14 N9 G A2729 14.812 12.049 77.656 1.00 41.70 N
ATOM 15 C8 G A2729 13.938 12.751 76.876 1.00 41.87 C
ATOM 16 N7 G A2729 13.663 12.057 75.827 1.00 41.75 N
ATOM 17 C5 G A2729 14.393 10.870 75.921 1.00 41.49 C
ATOM 18 C6 G A2729 14.525 9.730 75.075 1.00 41.28 C
ATOM 19 O6 G A2729 13.945 9.497 74.022 1.00 41.28 O
ATOM 20 N1 G A2729 15.380 8.743 75.524 1.00 41.07 N
ATOM 21 C2 G A2729 16.033 8.874 76.685 1.00 41.07 C
ATOM 22 N2 G A2729 16.812 7.857 76.994 1.00 40.87 N
ATOM 23 N3 G A2729 15.940 9.923 77.480 1.00 41.26 N
ATOM 24 C4 G A2729 15.114 10.869 77.045 1.00 41.46 C
ATOM 25 P U A2730 18.752 15.524 76.928 1.00 56.42 P
ATOM 26 OP1 U A2730 18.022 16.562 76.178 1.00 56.63 O
ATOM 27 OP2 U A2730 19.075 14.298 76.247 1.00 56.14 O
ATOM 28 O5' U A2730 20.079 16.108 77.605 1.00 56.42 O
TER
ATOM 1 O3' U B2706 17.149 5.332 72.334 1.00 80.62 O
ATOM 2 P U B2707 16.690 5.134 73.851 1.00 49.17 P
ATOM 3 OP1 U B2707 15.538 4.172 73.890 1.00 49.22 O
ATOM 4 OP2 U B2707 16.475 6.496 74.408 1.00 49.36 O
ATOM 5 O5' U B2707 17.972 4.466 74.501 1.00 48.99 O
ATOM 6 C5' U B2707 18.208 3.067 74.389 1.00 48.83 C
ATOM 7 C4' U B2707 19.019 2.577 75.543 1.00 48.76 C
ATOM 8 O4' U B2707 20.261 3.328 75.595 1.00 48.70 O
ATOM 9 C3' U B2707 18.411 2.823 76.902 1.00 48.91 C
ATOM 10 O3' U B2707 17.453 1.869 77.270 1.00 48.96 O
ATOM 11 C2' U B2707 19.622 2.819 77.792 1.00 48.84 C
ATOM 12 O2' U B2707 20.111 1.489 77.933 1.00 48.70 O
ATOM 13 C1' U B2707 20.591 3.615 76.927 1.00 48.76 C
ATOM 14 N1 U B2707 20.444 5.077 77.141 1.00 48.93 N
ATOM 15 C2 U B2707 20.848 5.573 78.364 1.00 49.02 C
ATOM 16 O2 U B2707 21.298 4.838 79.232 1.00 48.97 O
ATOM 17 N3 U B2707 20.695 6.931 78.561 1.00 49.19 N
ATOM 18 C4 U B2707 20.148 7.823 77.656 1.00 49.28 C
ATOM 19 O4 U B2707 20.045 9.020 77.981 1.00 49.46 O
ATOM 20 C5 U B2707 19.749 7.234 76.405 1.00 49.18 C
ATOM 21 C6 U B2707 19.909 5.924 76.201 1.00 49.01 C
ATOM 22 P A B2708 16.373 2.249 78.400 1.00 39.17 P
ATOM 23 OP1 A B2708 15.615 1.009 78.747 1.00 39.18 O
ATOM 24 OP2 A B2708 15.644 3.344 77.904 1.00 39.31 O
ATOM 25 O5' A B2708 17.279 2.722 79.625 1.00 39.19 O
TER
Atoms:
OP1: (12.069,18.055,78.004)
OP2: (11.985,15.810,76.863)
C3': (16.722,14.324,78.023)
C1': (15.441,12.554,78.874)
C5': (14.635,15.796,77.999)
O6: (13.945,9.497,74.022)
O4': (14.766,13.728,79.225)
C8: (13.938,12.751,76.876)
C2: (16.033,8.874,76.685)
C6: (14.525,9.730,75.075)
C5: (14.393,10.870,75.921)
C4: (15.114,10.869,77.045)
P: (12.158,16.587,78.080)
C4': (15.528,14.880,78.787)
C2': (16.889,12.937,78.588)
O2': (17.596,12.991,79.796)
N1: (15.380,8.743,75.524)
N2: (16.812,7.857,76.994)
N3: (15.940,9.923,77.480)
N7: (13.663,12.057,75.827)
N9: (14.812,12.049,77.656)
O5': (13.513,16.184,78.772)
O3': (17.862,15.130,78.181)
OP2: (11.985,15.810,76.863)
C3': (16.722,14.324,78.023)
C1': (15.441,12.554,78.874)
C5': (14.635,15.796,77.999)
O6: (13.945,9.497,74.022)
O4': (14.766,13.728,79.225)
C8: (13.938,12.751,76.876)
C2: (16.033,8.874,76.685)
C6: (14.525,9.730,75.075)
C5: (14.393,10.870,75.921)
C4: (15.114,10.869,77.045)
P: (12.158,16.587,78.080)
C4': (15.528,14.880,78.787)
C2': (16.889,12.937,78.588)
O2': (17.596,12.991,79.796)
N1: (15.380,8.743,75.524)
N2: (16.812,7.857,76.994)
N3: (15.940,9.923,77.480)
N7: (13.663,12.057,75.827)
N9: (14.812,12.049,77.656)
O5': (13.513,16.184,78.772)
O3': (17.862,15.130,78.181)
C4: (20.148,7.823,77.656)
N3: (20.695,6.931,78.561)
OP1: (15.538,4.172,73.890)
OP2: (16.475,6.496,74.408)
C2: (20.848,5.573,78.364)
C1': (20.591,3.615,76.927)
C3': (18.411,2.823,76.902)
O5': (17.972,4.466,74.501)
O4': (20.261,3.328,75.595)
C5': (18.208,3.067,74.389)
P: (16.690,5.134,73.851)
C4': (19.019,2.577,75.543)
C2': (19.622,2.819,77.792)
O2': (20.111,1.489,77.933)
N1: (20.444,5.077,77.141)
O4: (20.045,9.020,77.981)
O2: (21.298,4.838,79.232)
C6: (19.909,5.924,76.201)
C5: (19.749,7.234,76.405)
O3': (17.453,1.869,77.270)
N3: (20.695,6.931,78.561)
OP1: (15.538,4.172,73.890)
OP2: (16.475,6.496,74.408)
C2: (20.848,5.573,78.364)
C1': (20.591,3.615,76.927)
C3': (18.411,2.823,76.902)
O5': (17.972,4.466,74.501)
O4': (20.261,3.328,75.595)
C5': (18.208,3.067,74.389)
P: (16.690,5.134,73.851)
C4': (19.019,2.577,75.543)
C2': (19.622,2.819,77.792)
O2': (20.111,1.489,77.933)
N1: (20.444,5.077,77.141)
O4: (20.045,9.020,77.981)
O2: (21.298,4.838,79.232)
C6: (19.909,5.924,76.201)
C5: (19.749,7.234,76.405)
O3': (17.453,1.869,77.270)
Image (generated by PyMOL):