Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1535:1556
Extra
PDB:
ATOM 1 O3' G A 534 99.314 -16.535 38.611 1.00 46.54 O
ATOM 2 P G A 535 100.225 -15.931 39.794 1.00 47.87 P
ATOM 3 OP1 G A 535 100.120 -16.871 40.940 1.00 47.78 O
ATOM 4 OP2 G A 535 99.852 -14.518 40.004 1.00 47.66 O
ATOM 5 O5' G A 535 101.679 -16.008 39.161 1.00 48.32 O
ATOM 6 C5' G A 535 102.173 -17.232 38.615 1.00 48.61 C
ATOM 7 C4' G A 535 103.489 -17.046 37.922 1.00 49.02 C
ATOM 8 O4' G A 535 103.323 -16.117 36.831 1.00 49.05 O
ATOM 9 C3' G A 535 104.582 -16.464 38.770 1.00 49.16 C
ATOM 10 O3' G A 535 105.817 -16.820 38.170 1.00 49.59 O
ATOM 11 C2' G A 535 104.361 -14.977 38.567 1.00 49.01 C
ATOM 12 O2' G A 535 105.454 -14.167 38.924 1.00 49.20 O
ATOM 13 C1' G A 535 104.096 -14.956 37.070 1.00 49.14 C
ATOM 14 N9 G A 535 103.315 -13.817 36.598 1.00 48.92 N
ATOM 15 C8 G A 535 102.241 -13.304 37.244 1.00 48.53 C
ATOM 16 N7 G A 535 101.675 -12.346 36.625 1.00 48.42 N
ATOM 17 C5 G A 535 102.389 -12.234 35.472 1.00 48.75 C
ATOM 18 C6 G A 535 102.158 -11.336 34.422 1.00 48.81 C
ATOM 19 O6 G A 535 101.194 -10.514 34.448 1.00 48.53 O
ATOM 20 N1 G A 535 103.047 -11.507 33.356 1.00 49.20 N
ATOM 21 C2 G A 535 104.069 -12.461 33.382 1.00 49.51 C
ATOM 22 N2 G A 535 104.935 -12.568 32.331 1.00 49.91 N
ATOM 23 N3 G A 535 104.263 -13.309 34.407 1.00 49.45 N
ATOM 24 C4 G A 535 103.383 -13.146 35.413 1.00 49.07 C
ATOM 25 P A A 536 106.487 -18.243 38.461 1.00 50.90 P
ATOM 26 OP1 A A 536 105.622 -19.295 37.874 1.00 50.84 O
ATOM 27 OP2 A A 536 106.782 -18.267 39.917 1.00 50.81 O
ATOM 28 O5' A A 536 107.820 -18.160 37.634 1.00 51.37 O
TER
ATOM 1 O3' A B 555 102.463 -9.432 28.851 1.00 43.10 O
ATOM 2 P U B 556 103.558 -9.802 30.001 1.00 50.10 P
ATOM 3 OP1 U B 556 103.803 -11.264 29.934 1.00 50.24 O
ATOM 4 OP2 U B 556 103.058 -9.217 31.280 1.00 49.72 O
ATOM 5 O5' U B 556 104.872 -9.058 29.527 1.00 50.49 O
ATOM 6 C5' U B 556 104.871 -7.692 29.180 1.00 50.51 C
ATOM 7 C4' U B 556 105.339 -7.521 27.773 1.00 50.89 C
ATOM 8 O4' U B 556 104.205 -7.573 26.871 1.00 50.77 O
ATOM 9 C3' U B 556 106.000 -6.217 27.434 1.00 51.09 C
ATOM 10 O3' U B 556 107.319 -6.172 27.883 1.00 51.35 O
ATOM 11 C2' U B 556 105.870 -6.201 25.915 1.00 51.36 C
ATOM 12 O2' U B 556 106.779 -7.111 25.324 1.00 51.73 O
ATOM 13 C1' U B 556 104.464 -6.775 25.738 1.00 51.05 C
ATOM 14 N1 U B 556 103.447 -5.719 25.672 1.00 50.78 N
ATOM 15 C2 U B 556 103.363 -5.034 24.491 1.00 51.00 C
ATOM 16 O2 U B 556 104.091 -5.321 23.563 1.00 51.38 O
ATOM 17 N3 U B 556 102.419 -4.043 24.448 1.00 50.77 N
ATOM 18 C4 U B 556 101.600 -3.713 25.494 1.00 50.35 C
ATOM 19 O4 U B 556 100.801 -2.826 25.348 1.00 50.19 O
ATOM 20 C5 U B 556 101.735 -4.459 26.691 1.00 50.15 C
ATOM 21 C6 U B 556 102.630 -5.432 26.742 1.00 50.36 C
ATOM 22 P G B 557 108.069 -4.784 28.158 1.00 47.37 P
ATOM 23 OP1 G B 557 109.415 -5.127 28.684 1.00 47.65 O
ATOM 24 OP2 G B 557 107.163 -3.950 29.000 1.00 46.97 O
ATOM 25 O5' G B 557 108.234 -4.186 26.712 1.00 47.68 O
TER
ATOM 2 P G A 535 100.225 -15.931 39.794 1.00 47.87 P
ATOM 3 OP1 G A 535 100.120 -16.871 40.940 1.00 47.78 O
ATOM 4 OP2 G A 535 99.852 -14.518 40.004 1.00 47.66 O
ATOM 5 O5' G A 535 101.679 -16.008 39.161 1.00 48.32 O
ATOM 6 C5' G A 535 102.173 -17.232 38.615 1.00 48.61 C
ATOM 7 C4' G A 535 103.489 -17.046 37.922 1.00 49.02 C
ATOM 8 O4' G A 535 103.323 -16.117 36.831 1.00 49.05 O
ATOM 9 C3' G A 535 104.582 -16.464 38.770 1.00 49.16 C
ATOM 10 O3' G A 535 105.817 -16.820 38.170 1.00 49.59 O
ATOM 11 C2' G A 535 104.361 -14.977 38.567 1.00 49.01 C
ATOM 12 O2' G A 535 105.454 -14.167 38.924 1.00 49.20 O
ATOM 13 C1' G A 535 104.096 -14.956 37.070 1.00 49.14 C
ATOM 14 N9 G A 535 103.315 -13.817 36.598 1.00 48.92 N
ATOM 15 C8 G A 535 102.241 -13.304 37.244 1.00 48.53 C
ATOM 16 N7 G A 535 101.675 -12.346 36.625 1.00 48.42 N
ATOM 17 C5 G A 535 102.389 -12.234 35.472 1.00 48.75 C
ATOM 18 C6 G A 535 102.158 -11.336 34.422 1.00 48.81 C
ATOM 19 O6 G A 535 101.194 -10.514 34.448 1.00 48.53 O
ATOM 20 N1 G A 535 103.047 -11.507 33.356 1.00 49.20 N
ATOM 21 C2 G A 535 104.069 -12.461 33.382 1.00 49.51 C
ATOM 22 N2 G A 535 104.935 -12.568 32.331 1.00 49.91 N
ATOM 23 N3 G A 535 104.263 -13.309 34.407 1.00 49.45 N
ATOM 24 C4 G A 535 103.383 -13.146 35.413 1.00 49.07 C
ATOM 25 P A A 536 106.487 -18.243 38.461 1.00 50.90 P
ATOM 26 OP1 A A 536 105.622 -19.295 37.874 1.00 50.84 O
ATOM 27 OP2 A A 536 106.782 -18.267 39.917 1.00 50.81 O
ATOM 28 O5' A A 536 107.820 -18.160 37.634 1.00 51.37 O
TER
ATOM 1 O3' A B 555 102.463 -9.432 28.851 1.00 43.10 O
ATOM 2 P U B 556 103.558 -9.802 30.001 1.00 50.10 P
ATOM 3 OP1 U B 556 103.803 -11.264 29.934 1.00 50.24 O
ATOM 4 OP2 U B 556 103.058 -9.217 31.280 1.00 49.72 O
ATOM 5 O5' U B 556 104.872 -9.058 29.527 1.00 50.49 O
ATOM 6 C5' U B 556 104.871 -7.692 29.180 1.00 50.51 C
ATOM 7 C4' U B 556 105.339 -7.521 27.773 1.00 50.89 C
ATOM 8 O4' U B 556 104.205 -7.573 26.871 1.00 50.77 O
ATOM 9 C3' U B 556 106.000 -6.217 27.434 1.00 51.09 C
ATOM 10 O3' U B 556 107.319 -6.172 27.883 1.00 51.35 O
ATOM 11 C2' U B 556 105.870 -6.201 25.915 1.00 51.36 C
ATOM 12 O2' U B 556 106.779 -7.111 25.324 1.00 51.73 O
ATOM 13 C1' U B 556 104.464 -6.775 25.738 1.00 51.05 C
ATOM 14 N1 U B 556 103.447 -5.719 25.672 1.00 50.78 N
ATOM 15 C2 U B 556 103.363 -5.034 24.491 1.00 51.00 C
ATOM 16 O2 U B 556 104.091 -5.321 23.563 1.00 51.38 O
ATOM 17 N3 U B 556 102.419 -4.043 24.448 1.00 50.77 N
ATOM 18 C4 U B 556 101.600 -3.713 25.494 1.00 50.35 C
ATOM 19 O4 U B 556 100.801 -2.826 25.348 1.00 50.19 O
ATOM 20 C5 U B 556 101.735 -4.459 26.691 1.00 50.15 C
ATOM 21 C6 U B 556 102.630 -5.432 26.742 1.00 50.36 C
ATOM 22 P G B 557 108.069 -4.784 28.158 1.00 47.37 P
ATOM 23 OP1 G B 557 109.415 -5.127 28.684 1.00 47.65 O
ATOM 24 OP2 G B 557 107.163 -3.950 29.000 1.00 46.97 O
ATOM 25 O5' G B 557 108.234 -4.186 26.712 1.00 47.68 O
TER
Atoms:
OP1: (100.120,-16.871,40.940)
OP2: (99.852,-14.518,40.004)
C3': (104.582,-16.464,38.770)
C1': (104.096,-14.956,37.070)
C5': (102.173,-17.232,38.615)
O6: (101.194,-10.514,34.448)
O4': (103.323,-16.117,36.831)
C8: (102.241,-13.304,37.244)
C2: (104.069,-12.461,33.382)
C6: (102.158,-11.336,34.422)
C5: (102.389,-12.234,35.472)
C4: (103.383,-13.146,35.413)
P: (100.225,-15.931,39.794)
C4': (103.489,-17.046,37.922)
C2': (104.361,-14.977,38.567)
O2': (105.454,-14.167,38.924)
N1: (103.047,-11.507,33.356)
N2: (104.935,-12.568,32.331)
N3: (104.263,-13.309,34.407)
N7: (101.675,-12.346,36.625)
N9: (103.315,-13.817,36.598)
O5': (101.679,-16.008,39.161)
O3': (105.817,-16.820,38.170)
OP2: (99.852,-14.518,40.004)
C3': (104.582,-16.464,38.770)
C1': (104.096,-14.956,37.070)
C5': (102.173,-17.232,38.615)
O6: (101.194,-10.514,34.448)
O4': (103.323,-16.117,36.831)
C8: (102.241,-13.304,37.244)
C2: (104.069,-12.461,33.382)
C6: (102.158,-11.336,34.422)
C5: (102.389,-12.234,35.472)
C4: (103.383,-13.146,35.413)
P: (100.225,-15.931,39.794)
C4': (103.489,-17.046,37.922)
C2': (104.361,-14.977,38.567)
O2': (105.454,-14.167,38.924)
N1: (103.047,-11.507,33.356)
N2: (104.935,-12.568,32.331)
N3: (104.263,-13.309,34.407)
N7: (101.675,-12.346,36.625)
N9: (103.315,-13.817,36.598)
O5': (101.679,-16.008,39.161)
O3': (105.817,-16.820,38.170)
C4: (101.600,-3.713,25.494)
N3: (102.419,-4.043,24.448)
OP1: (103.803,-11.264,29.934)
OP2: (103.058,-9.217,31.280)
C2: (103.363,-5.034,24.491)
C1': (104.464,-6.775,25.738)
C3': (106.000,-6.217,27.434)
O5': (104.872,-9.058,29.527)
O4': (104.205,-7.573,26.871)
C5': (104.871,-7.692,29.180)
P: (103.558,-9.802,30.001)
C4': (105.339,-7.521,27.773)
C2': (105.870,-6.201,25.915)
O2': (106.779,-7.111,25.324)
N1: (103.447,-5.719,25.672)
O4: (100.801,-2.826,25.348)
O2: (104.091,-5.321,23.563)
C6: (102.630,-5.432,26.742)
C5: (101.735,-4.459,26.691)
O3': (107.319,-6.172,27.883)
N3: (102.419,-4.043,24.448)
OP1: (103.803,-11.264,29.934)
OP2: (103.058,-9.217,31.280)
C2: (103.363,-5.034,24.491)
C1': (104.464,-6.775,25.738)
C3': (106.000,-6.217,27.434)
O5': (104.872,-9.058,29.527)
O4': (104.205,-7.573,26.871)
C5': (104.871,-7.692,29.180)
P: (103.558,-9.802,30.001)
C4': (105.339,-7.521,27.773)
C2': (105.870,-6.201,25.915)
O2': (106.779,-7.111,25.324)
N1: (103.447,-5.719,25.672)
O4: (100.801,-2.826,25.348)
O2: (104.091,-5.321,23.563)
C6: (102.630,-5.432,26.742)
C5: (101.735,-4.459,26.691)
O3': (107.319,-6.172,27.883)
Image (generated by PyMOL):