Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A63:A27
Extra
PDB:
ATOM 1 O3' U A 62 2.401 60.419 34.486 1.00 41.03 O
ATOM 2 P G A 63 3.601 59.571 35.122 1.00 40.39 P
ATOM 3 OP1 G A 63 3.117 59.004 36.401 1.00 40.53 O
ATOM 4 OP2 G A 63 4.843 60.379 35.077 1.00 40.05 O
ATOM 5 O5' G A 63 3.786 58.381 34.079 1.00 38.86 O
ATOM 6 C5' G A 63 2.795 57.374 33.958 1.00 36.65 C
ATOM 7 C4' G A 63 3.090 56.545 32.728 1.00 34.92 C
ATOM 8 O4' G A 63 3.062 57.386 31.544 1.00 33.75 O
ATOM 9 C3' G A 63 4.487 55.937 32.695 1.00 33.66 C
ATOM 10 O3' G A 63 4.601 54.786 33.523 1.00 32.96 O
ATOM 11 C2' G A 63 4.617 55.645 31.206 1.00 32.91 C
ATOM 12 O2' G A 63 3.860 54.525 30.793 1.00 32.94 O
ATOM 13 C1' G A 63 4.045 56.938 30.626 1.00 32.65 C
ATOM 14 N9 G A 63 5.075 57.963 30.481 1.00 31.59 N
ATOM 15 C8 G A 63 5.428 58.899 31.418 1.00 31.12 C
ATOM 16 N7 G A 63 6.389 59.687 31.037 1.00 31.35 N
ATOM 17 C5 G A 63 6.702 59.244 29.763 1.00 31.29 C
ATOM 18 C6 G A 63 7.677 59.730 28.856 1.00 31.67 C
ATOM 19 O6 G A 63 8.462 60.672 29.037 1.00 32.12 O
ATOM 20 N1 G A 63 7.683 59.018 27.650 1.00 31.13 N
ATOM 21 C2 G A 63 6.843 57.961 27.370 1.00 30.96 C
ATOM 22 N2 G A 63 6.988 57.394 26.164 1.00 30.38 N
ATOM 23 N3 G A 63 5.925 57.493 28.221 1.00 31.11 N
ATOM 24 C4 G A 63 5.904 58.181 29.398 1.00 31.40 C
ATOM 25 P A A 64 6.037 54.410 34.127 1.00 32.75 P
ATOM 26 OP1 A A 64 5.826 53.539 35.307 1.00 33.04 O
ATOM 27 OP2 A A 64 6.858 55.634 34.268 1.00 32.40 O
ATOM 28 O5' A A 64 6.652 53.564 32.914 1.00 32.15 O
TER
ATOM 1 O3' G B 26 11.338 58.601 25.930 1.00 30.76 O
ATOM 2 P U B 27 10.472 59.342 24.810 1.00 31.41 P
ATOM 3 OP1 U B 27 11.352 60.318 24.126 1.00 31.33 O
ATOM 4 OP2 U B 27 9.228 59.826 25.448 1.00 30.77 O
ATOM 5 O5' U B 27 10.079 58.135 23.827 1.00 30.76 O
ATOM 6 C5' U B 27 11.051 57.553 22.965 1.00 30.57 C
ATOM 7 C4' U B 27 10.774 56.084 22.670 1.00 30.58 C
ATOM 8 O4' U B 27 11.188 55.268 23.795 1.00 29.85 O
ATOM 9 C3' U B 27 9.321 55.685 22.441 1.00 30.52 C
ATOM 10 O3' U B 27 8.948 55.926 21.101 1.00 32.11 O
ATOM 11 C2' U B 27 9.346 54.194 22.755 1.00 29.93 C
ATOM 12 O2' U B 27 9.869 53.395 21.709 1.00 29.61 O
ATOM 13 C1' U B 27 10.308 54.160 23.939 1.00 28.94 C
ATOM 14 N1 U B 27 9.673 54.194 25.310 1.00 27.72 N
ATOM 15 C2 U B 27 8.851 53.160 25.738 1.00 27.03 C
ATOM 16 O2 U B 27 8.573 52.182 25.068 1.00 25.86 O
ATOM 17 N3 U B 27 8.348 53.315 27.010 1.00 27.00 N
ATOM 18 C4 U B 27 8.577 54.368 27.884 1.00 27.29 C
ATOM 19 O4 U B 27 8.060 54.379 28.997 1.00 27.60 O
ATOM 20 C5 U B 27 9.440 55.398 27.368 1.00 27.28 C
ATOM 21 C6 U B 27 9.939 55.274 26.133 1.00 27.21 C
ATOM 22 P A B 28 7.533 56.606 20.780 1.00 33.29 P
ATOM 23 OP1 A B 28 7.593 57.058 19.374 1.00 33.47 O
ATOM 24 OP2 A B 28 7.195 57.586 21.840 1.00 31.99 O
ATOM 25 O5' A B 28 6.535 55.357 20.896 1.00 34.52 O
TER
ATOM 2 P G A 63 3.601 59.571 35.122 1.00 40.39 P
ATOM 3 OP1 G A 63 3.117 59.004 36.401 1.00 40.53 O
ATOM 4 OP2 G A 63 4.843 60.379 35.077 1.00 40.05 O
ATOM 5 O5' G A 63 3.786 58.381 34.079 1.00 38.86 O
ATOM 6 C5' G A 63 2.795 57.374 33.958 1.00 36.65 C
ATOM 7 C4' G A 63 3.090 56.545 32.728 1.00 34.92 C
ATOM 8 O4' G A 63 3.062 57.386 31.544 1.00 33.75 O
ATOM 9 C3' G A 63 4.487 55.937 32.695 1.00 33.66 C
ATOM 10 O3' G A 63 4.601 54.786 33.523 1.00 32.96 O
ATOM 11 C2' G A 63 4.617 55.645 31.206 1.00 32.91 C
ATOM 12 O2' G A 63 3.860 54.525 30.793 1.00 32.94 O
ATOM 13 C1' G A 63 4.045 56.938 30.626 1.00 32.65 C
ATOM 14 N9 G A 63 5.075 57.963 30.481 1.00 31.59 N
ATOM 15 C8 G A 63 5.428 58.899 31.418 1.00 31.12 C
ATOM 16 N7 G A 63 6.389 59.687 31.037 1.00 31.35 N
ATOM 17 C5 G A 63 6.702 59.244 29.763 1.00 31.29 C
ATOM 18 C6 G A 63 7.677 59.730 28.856 1.00 31.67 C
ATOM 19 O6 G A 63 8.462 60.672 29.037 1.00 32.12 O
ATOM 20 N1 G A 63 7.683 59.018 27.650 1.00 31.13 N
ATOM 21 C2 G A 63 6.843 57.961 27.370 1.00 30.96 C
ATOM 22 N2 G A 63 6.988 57.394 26.164 1.00 30.38 N
ATOM 23 N3 G A 63 5.925 57.493 28.221 1.00 31.11 N
ATOM 24 C4 G A 63 5.904 58.181 29.398 1.00 31.40 C
ATOM 25 P A A 64 6.037 54.410 34.127 1.00 32.75 P
ATOM 26 OP1 A A 64 5.826 53.539 35.307 1.00 33.04 O
ATOM 27 OP2 A A 64 6.858 55.634 34.268 1.00 32.40 O
ATOM 28 O5' A A 64 6.652 53.564 32.914 1.00 32.15 O
TER
ATOM 1 O3' G B 26 11.338 58.601 25.930 1.00 30.76 O
ATOM 2 P U B 27 10.472 59.342 24.810 1.00 31.41 P
ATOM 3 OP1 U B 27 11.352 60.318 24.126 1.00 31.33 O
ATOM 4 OP2 U B 27 9.228 59.826 25.448 1.00 30.77 O
ATOM 5 O5' U B 27 10.079 58.135 23.827 1.00 30.76 O
ATOM 6 C5' U B 27 11.051 57.553 22.965 1.00 30.57 C
ATOM 7 C4' U B 27 10.774 56.084 22.670 1.00 30.58 C
ATOM 8 O4' U B 27 11.188 55.268 23.795 1.00 29.85 O
ATOM 9 C3' U B 27 9.321 55.685 22.441 1.00 30.52 C
ATOM 10 O3' U B 27 8.948 55.926 21.101 1.00 32.11 O
ATOM 11 C2' U B 27 9.346 54.194 22.755 1.00 29.93 C
ATOM 12 O2' U B 27 9.869 53.395 21.709 1.00 29.61 O
ATOM 13 C1' U B 27 10.308 54.160 23.939 1.00 28.94 C
ATOM 14 N1 U B 27 9.673 54.194 25.310 1.00 27.72 N
ATOM 15 C2 U B 27 8.851 53.160 25.738 1.00 27.03 C
ATOM 16 O2 U B 27 8.573 52.182 25.068 1.00 25.86 O
ATOM 17 N3 U B 27 8.348 53.315 27.010 1.00 27.00 N
ATOM 18 C4 U B 27 8.577 54.368 27.884 1.00 27.29 C
ATOM 19 O4 U B 27 8.060 54.379 28.997 1.00 27.60 O
ATOM 20 C5 U B 27 9.440 55.398 27.368 1.00 27.28 C
ATOM 21 C6 U B 27 9.939 55.274 26.133 1.00 27.21 C
ATOM 22 P A B 28 7.533 56.606 20.780 1.00 33.29 P
ATOM 23 OP1 A B 28 7.593 57.058 19.374 1.00 33.47 O
ATOM 24 OP2 A B 28 7.195 57.586 21.840 1.00 31.99 O
ATOM 25 O5' A B 28 6.535 55.357 20.896 1.00 34.52 O
TER
Atoms:
OP1: (3.117,59.004,36.401)
OP2: (4.843,60.379,35.077)
C3': (4.487,55.937,32.695)
C1': (4.045,56.938,30.626)
C5': (2.795,57.374,33.958)
O6: (8.462,60.672,29.037)
O4': (3.062,57.386,31.544)
C8: (5.428,58.899,31.418)
C2: (6.843,57.961,27.370)
C6: (7.677,59.730,28.856)
C5: (6.702,59.244,29.763)
C4: (5.904,58.181,29.398)
P: (3.601,59.571,35.122)
C4': (3.090,56.545,32.728)
C2': (4.617,55.645,31.206)
O2': (3.860,54.525,30.793)
N1: (7.683,59.018,27.650)
N2: (6.988,57.394,26.164)
N3: (5.925,57.493,28.221)
N7: (6.389,59.687,31.037)
N9: (5.075,57.963,30.481)
O5': (3.786,58.381,34.079)
O3': (4.601,54.786,33.523)
OP2: (4.843,60.379,35.077)
C3': (4.487,55.937,32.695)
C1': (4.045,56.938,30.626)
C5': (2.795,57.374,33.958)
O6: (8.462,60.672,29.037)
O4': (3.062,57.386,31.544)
C8: (5.428,58.899,31.418)
C2: (6.843,57.961,27.370)
C6: (7.677,59.730,28.856)
C5: (6.702,59.244,29.763)
C4: (5.904,58.181,29.398)
P: (3.601,59.571,35.122)
C4': (3.090,56.545,32.728)
C2': (4.617,55.645,31.206)
O2': (3.860,54.525,30.793)
N1: (7.683,59.018,27.650)
N2: (6.988,57.394,26.164)
N3: (5.925,57.493,28.221)
N7: (6.389,59.687,31.037)
N9: (5.075,57.963,30.481)
O5': (3.786,58.381,34.079)
O3': (4.601,54.786,33.523)
C4: (8.577,54.368,27.884)
N3: (8.348,53.315,27.010)
OP1: (11.352,60.318,24.126)
OP2: (9.228,59.826,25.448)
C2: (8.851,53.160,25.738)
C1': (10.308,54.160,23.939)
C3': (9.321,55.685,22.441)
O5': (10.079,58.135,23.827)
O4': (11.188,55.268,23.795)
C5': (11.051,57.553,22.965)
P: (10.472,59.342,24.810)
C4': (10.774,56.084,22.670)
C2': (9.346,54.194,22.755)
O2': (9.869,53.395,21.709)
N1: (9.673,54.194,25.310)
O4: (8.060,54.379,28.997)
O2: (8.573,52.182,25.068)
C6: (9.939,55.274,26.133)
C5: (9.440,55.398,27.368)
O3': (8.948,55.926,21.101)
N3: (8.348,53.315,27.010)
OP1: (11.352,60.318,24.126)
OP2: (9.228,59.826,25.448)
C2: (8.851,53.160,25.738)
C1': (10.308,54.160,23.939)
C3': (9.321,55.685,22.441)
O5': (10.079,58.135,23.827)
O4': (11.188,55.268,23.795)
C5': (11.051,57.553,22.965)
P: (10.472,59.342,24.810)
C4': (10.774,56.084,22.670)
C2': (9.346,54.194,22.755)
O2': (9.869,53.395,21.709)
N1: (9.673,54.194,25.310)
O4: (8.060,54.379,28.997)
O2: (8.573,52.182,25.068)
C6: (9.939,55.274,26.133)
C5: (9.440,55.398,27.368)
O3': (8.948,55.926,21.101)
Image (generated by PyMOL):