Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCM:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.388 91.874 107.673 1.00 32.10 O
ATOM 2 P G A 556 3.894 91.202 109.049 1.00 28.70 P
ATOM 3 OP1 G A 556 4.904 91.539 110.083 1.00 32.29 O
ATOM 4 OP2 G A 556 3.569 89.785 108.779 1.00 29.13 O
ATOM 5 O5' G A 556 2.555 91.988 109.388 1.00 29.31 O
ATOM 6 C5' G A 556 2.597 93.337 109.867 1.00 30.31 C
ATOM 7 C4' G A 556 1.195 93.844 110.080 1.00 34.58 C
ATOM 8 O4' G A 556 0.529 93.971 108.793 1.00 35.74 O
ATOM 9 C3' G A 556 0.277 92.913 110.859 1.00 35.66 C
ATOM 10 O3' G A 556 0.472 92.987 112.264 1.00 36.57 O
ATOM 11 C2' G A 556 -1.096 93.399 110.426 1.00 35.17 C
ATOM 12 O2' G A 556 -1.447 94.618 111.050 1.00 34.39 O
ATOM 13 C1' G A 556 -0.851 93.655 108.939 1.00 34.69 C
ATOM 14 N9 G A 556 -1.136 92.476 108.128 1.00 32.41 N
ATOM 15 C8 G A 556 -0.242 91.525 107.709 1.00 31.68 C
ATOM 16 N7 G A 556 -0.794 90.590 106.985 1.00 32.05 N
ATOM 17 C5 G A 556 -2.132 90.944 106.930 1.00 30.54 C
ATOM 18 C6 G A 556 -3.215 90.312 106.288 1.00 31.11 C
ATOM 19 O6 G A 556 -3.211 89.264 105.636 1.00 32.24 O
ATOM 20 N1 G A 556 -4.401 91.016 106.466 1.00 29.04 N
ATOM 21 C2 G A 556 -4.527 92.178 107.185 1.00 31.92 C
ATOM 22 N2 G A 556 -5.755 92.720 107.244 1.00 30.33 N
ATOM 23 N3 G A 556 -3.519 92.771 107.802 1.00 34.13 N
ATOM 24 C4 G A 556 -2.359 92.105 107.630 1.00 32.15 C
ATOM 25 P A A 557 0.036 91.746 113.192 1.00 36.92 P
ATOM 26 OP1 A A 557 0.626 91.979 114.536 1.00 37.78 O
ATOM 27 OP2 A A 557 0.292 90.459 112.494 1.00 31.85 O
ATOM 28 O5' A A 557 -1.535 91.942 113.317 1.00 39.34 O
TER
ATOM 1 O3' G B 576 -7.831 88.258 106.383 1.00 49.32 O
ATOM 2 P U B 577 -7.968 89.329 105.182 1.00 47.91 P
ATOM 3 OP1 U B 577 -8.405 88.624 103.950 1.00 48.47 O
ATOM 4 OP2 U B 577 -6.753 90.176 105.146 1.00 48.38 O
ATOM 5 O5' U B 577 -9.160 90.264 105.675 1.00 47.48 O
ATOM 6 C5' U B 577 -10.458 89.714 105.999 1.00 46.86 C
ATOM 7 C4' U B 577 -11.007 90.376 107.240 1.00 46.34 C
ATOM 8 O4' U B 577 -10.366 89.846 108.432 1.00 46.60 O
ATOM 9 C3' U B 577 -10.744 91.866 107.303 1.00 46.89 C
ATOM 10 O3' U B 577 -11.701 92.583 106.537 1.00 48.80 O
ATOM 11 C2' U B 577 -10.815 92.163 108.795 1.00 46.47 C
ATOM 12 O2' U B 577 -12.137 92.331 109.253 1.00 45.95 O
ATOM 13 C1' U B 577 -10.216 90.882 109.393 1.00 46.66 C
ATOM 14 N1 U B 577 -8.794 90.982 109.758 1.00 46.13 N
ATOM 15 C2 U B 577 -8.419 91.990 110.628 1.00 46.32 C
ATOM 16 O2 U B 577 -9.211 92.801 111.086 1.00 45.22 O
ATOM 17 N3 U B 577 -7.078 92.018 110.940 1.00 45.86 N
ATOM 18 C4 U B 577 -6.095 91.165 110.474 1.00 45.55 C
ATOM 19 O4 U B 577 -4.928 91.333 110.830 1.00 45.65 O
ATOM 20 C5 U B 577 -6.559 90.153 109.575 1.00 45.70 C
ATOM 21 C6 U B 577 -7.859 90.096 109.256 1.00 47.19 C
ATOM 22 P A B 578 -11.259 93.918 105.770 1.00 49.00 P
ATOM 23 OP1 A B 578 -12.394 94.404 104.943 1.00 50.78 O
ATOM 24 OP2 A B 578 -9.948 93.645 105.127 1.00 51.20 O
ATOM 25 O5' A B 578 -11.023 94.961 106.945 1.00 48.52 O
TER
ATOM 2 P G A 556 3.894 91.202 109.049 1.00 28.70 P
ATOM 3 OP1 G A 556 4.904 91.539 110.083 1.00 32.29 O
ATOM 4 OP2 G A 556 3.569 89.785 108.779 1.00 29.13 O
ATOM 5 O5' G A 556 2.555 91.988 109.388 1.00 29.31 O
ATOM 6 C5' G A 556 2.597 93.337 109.867 1.00 30.31 C
ATOM 7 C4' G A 556 1.195 93.844 110.080 1.00 34.58 C
ATOM 8 O4' G A 556 0.529 93.971 108.793 1.00 35.74 O
ATOM 9 C3' G A 556 0.277 92.913 110.859 1.00 35.66 C
ATOM 10 O3' G A 556 0.472 92.987 112.264 1.00 36.57 O
ATOM 11 C2' G A 556 -1.096 93.399 110.426 1.00 35.17 C
ATOM 12 O2' G A 556 -1.447 94.618 111.050 1.00 34.39 O
ATOM 13 C1' G A 556 -0.851 93.655 108.939 1.00 34.69 C
ATOM 14 N9 G A 556 -1.136 92.476 108.128 1.00 32.41 N
ATOM 15 C8 G A 556 -0.242 91.525 107.709 1.00 31.68 C
ATOM 16 N7 G A 556 -0.794 90.590 106.985 1.00 32.05 N
ATOM 17 C5 G A 556 -2.132 90.944 106.930 1.00 30.54 C
ATOM 18 C6 G A 556 -3.215 90.312 106.288 1.00 31.11 C
ATOM 19 O6 G A 556 -3.211 89.264 105.636 1.00 32.24 O
ATOM 20 N1 G A 556 -4.401 91.016 106.466 1.00 29.04 N
ATOM 21 C2 G A 556 -4.527 92.178 107.185 1.00 31.92 C
ATOM 22 N2 G A 556 -5.755 92.720 107.244 1.00 30.33 N
ATOM 23 N3 G A 556 -3.519 92.771 107.802 1.00 34.13 N
ATOM 24 C4 G A 556 -2.359 92.105 107.630 1.00 32.15 C
ATOM 25 P A A 557 0.036 91.746 113.192 1.00 36.92 P
ATOM 26 OP1 A A 557 0.626 91.979 114.536 1.00 37.78 O
ATOM 27 OP2 A A 557 0.292 90.459 112.494 1.00 31.85 O
ATOM 28 O5' A A 557 -1.535 91.942 113.317 1.00 39.34 O
TER
ATOM 1 O3' G B 576 -7.831 88.258 106.383 1.00 49.32 O
ATOM 2 P U B 577 -7.968 89.329 105.182 1.00 47.91 P
ATOM 3 OP1 U B 577 -8.405 88.624 103.950 1.00 48.47 O
ATOM 4 OP2 U B 577 -6.753 90.176 105.146 1.00 48.38 O
ATOM 5 O5' U B 577 -9.160 90.264 105.675 1.00 47.48 O
ATOM 6 C5' U B 577 -10.458 89.714 105.999 1.00 46.86 C
ATOM 7 C4' U B 577 -11.007 90.376 107.240 1.00 46.34 C
ATOM 8 O4' U B 577 -10.366 89.846 108.432 1.00 46.60 O
ATOM 9 C3' U B 577 -10.744 91.866 107.303 1.00 46.89 C
ATOM 10 O3' U B 577 -11.701 92.583 106.537 1.00 48.80 O
ATOM 11 C2' U B 577 -10.815 92.163 108.795 1.00 46.47 C
ATOM 12 O2' U B 577 -12.137 92.331 109.253 1.00 45.95 O
ATOM 13 C1' U B 577 -10.216 90.882 109.393 1.00 46.66 C
ATOM 14 N1 U B 577 -8.794 90.982 109.758 1.00 46.13 N
ATOM 15 C2 U B 577 -8.419 91.990 110.628 1.00 46.32 C
ATOM 16 O2 U B 577 -9.211 92.801 111.086 1.00 45.22 O
ATOM 17 N3 U B 577 -7.078 92.018 110.940 1.00 45.86 N
ATOM 18 C4 U B 577 -6.095 91.165 110.474 1.00 45.55 C
ATOM 19 O4 U B 577 -4.928 91.333 110.830 1.00 45.65 O
ATOM 20 C5 U B 577 -6.559 90.153 109.575 1.00 45.70 C
ATOM 21 C6 U B 577 -7.859 90.096 109.256 1.00 47.19 C
ATOM 22 P A B 578 -11.259 93.918 105.770 1.00 49.00 P
ATOM 23 OP1 A B 578 -12.394 94.404 104.943 1.00 50.78 O
ATOM 24 OP2 A B 578 -9.948 93.645 105.127 1.00 51.20 O
ATOM 25 O5' A B 578 -11.023 94.961 106.945 1.00 48.52 O
TER
Atoms:
OP1: (4.904,91.539,110.083)
OP2: (3.569,89.785,108.779)
C3': (0.277,92.913,110.859)
C1': (-0.851,93.655,108.939)
C5': (2.597,93.337,109.867)
O6: (-3.211,89.264,105.636)
O4': (0.529,93.971,108.793)
C8: (-0.242,91.525,107.709)
C2: (-4.527,92.178,107.185)
C6: (-3.215,90.312,106.288)
C5: (-2.132,90.944,106.930)
C4: (-2.359,92.105,107.630)
P: (3.894,91.202,109.049)
C4': (1.195,93.844,110.080)
C2': (-1.096,93.399,110.426)
O2': (-1.447,94.618,111.050)
N1: (-4.401,91.016,106.466)
N2: (-5.755,92.720,107.244)
N3: (-3.519,92.771,107.802)
N7: (-0.794,90.590,106.985)
N9: (-1.136,92.476,108.128)
O5': (2.555,91.988,109.388)
O3': (0.472,92.987,112.264)
OP2: (3.569,89.785,108.779)
C3': (0.277,92.913,110.859)
C1': (-0.851,93.655,108.939)
C5': (2.597,93.337,109.867)
O6: (-3.211,89.264,105.636)
O4': (0.529,93.971,108.793)
C8: (-0.242,91.525,107.709)
C2: (-4.527,92.178,107.185)
C6: (-3.215,90.312,106.288)
C5: (-2.132,90.944,106.930)
C4: (-2.359,92.105,107.630)
P: (3.894,91.202,109.049)
C4': (1.195,93.844,110.080)
C2': (-1.096,93.399,110.426)
O2': (-1.447,94.618,111.050)
N1: (-4.401,91.016,106.466)
N2: (-5.755,92.720,107.244)
N3: (-3.519,92.771,107.802)
N7: (-0.794,90.590,106.985)
N9: (-1.136,92.476,108.128)
O5': (2.555,91.988,109.388)
O3': (0.472,92.987,112.264)
C4: (-6.095,91.165,110.474)
N3: (-7.078,92.018,110.940)
OP1: (-8.405,88.624,103.950)
OP2: (-6.753,90.176,105.146)
C2: (-8.419,91.990,110.628)
C1': (-10.216,90.882,109.393)
C3': (-10.744,91.866,107.303)
O5': (-9.160,90.264,105.675)
O4': (-10.366,89.846,108.432)
C5': (-10.458,89.714,105.999)
P: (-7.968,89.329,105.182)
C4': (-11.007,90.376,107.240)
C2': (-10.815,92.163,108.795)
O2': (-12.137,92.331,109.253)
N1: (-8.794,90.982,109.758)
O4: (-4.928,91.333,110.830)
O2: (-9.211,92.801,111.086)
C6: (-7.859,90.096,109.256)
C5: (-6.559,90.153,109.575)
O3': (-11.701,92.583,106.537)
N3: (-7.078,92.018,110.940)
OP1: (-8.405,88.624,103.950)
OP2: (-6.753,90.176,105.146)
C2: (-8.419,91.990,110.628)
C1': (-10.216,90.882,109.393)
C3': (-10.744,91.866,107.303)
O5': (-9.160,90.264,105.675)
O4': (-10.366,89.846,108.432)
C5': (-10.458,89.714,105.999)
P: (-7.968,89.329,105.182)
C4': (-11.007,90.376,107.240)
C2': (-10.815,92.163,108.795)
O2': (-12.137,92.331,109.253)
N1: (-8.794,90.982,109.758)
O4: (-4.928,91.333,110.830)
O2: (-9.211,92.801,111.086)
C6: (-7.859,90.096,109.256)
C5: (-6.559,90.153,109.575)
O3': (-11.701,92.583,106.537)
Image (generated by PyMOL):