ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01955:01918

Extra

PDB:
ATOM 1 O3' U A1954 106.277 116.367 99.506 1.00 47.47 O
ATOM 2 P G A1955 106.825 115.685 98.178 1.00 49.72 P
ATOM 3 OP1 G A1955 106.096 116.284 97.031 1.00 50.84 O
ATOM 4 OP2 G A1955 106.843 114.203 98.357 1.00 48.05 O
ATOM 5 O5' G A1955 108.321 116.209 98.134 1.00 50.68 O
ATOM 6 C5' G A1955 108.602 117.614 98.029 1.00 47.96 C
ATOM 7 C4' G A1955 110.080 117.853 98.173 1.00 45.97 C
ATOM 8 O4' G A1955 110.466 117.712 99.564 1.00 45.14 O
ATOM 9 C3' G A1955 110.972 116.862 97.446 1.00 44.04 C
ATOM 10 O3' G A1955 111.081 117.130 96.057 1.00 44.16 O
ATOM 11 C2' G A1955 112.274 117.028 98.202 1.00 44.18 C
ATOM 12 O2' G A1955 112.930 118.231 97.861 1.00 44.23 O
ATOM 13 C1' G A1955 111.757 117.129 99.638 1.00 45.16 C
ATOM 14 N9 G A1955 111.622 115.807 100.241 1.00 47.12 N
ATOM 15 C8 G A1955 110.485 115.038 100.297 1.00 47.88 C
ATOM 16 N7 G A1955 110.679 113.878 100.856 1.00 48.26 N
ATOM 17 C5 G A1955 112.023 113.880 101.196 1.00 48.84 C
ATOM 18 C6 G A1955 112.814 112.882 101.823 1.00 49.26 C
ATOM 19 O6 G A1955 112.471 111.757 102.213 1.00 48.38 O
ATOM 20 N1 G A1955 114.130 113.301 101.982 1.00 49.12 N
ATOM 21 C2 G A1955 114.623 114.518 101.590 1.00 48.41 C
ATOM 22 N2 G A1955 115.920 114.733 101.826 1.00 50.40 N
ATOM 23 N3 G A1955 113.899 115.455 101.007 1.00 48.77 N
ATOM 24 C4 G A1955 112.617 115.070 100.839 1.00 48.34 C
ATOM 25 P A A1956 111.293 115.911 95.028 1.00 46.44 P
ATOM 26 OP1 A A1956 110.735 116.336 93.711 1.00 44.86 O
ATOM 27 OP2 A A1956 110.792 114.671 95.666 1.00 45.43 O
ATOM 28 O5' A A1956 112.880 115.793 94.903 1.00 44.53 O
TER

ATOM 1 O3' G B1917 117.108 110.677 101.984 1.00 59.72 O
ATOM 2 P U B1918 117.391 111.127 103.498 1.00 60.92 P
ATOM 3 OP1 U B1918 117.543 109.931 104.365 1.00 62.49 O
ATOM 4 OP2 U B1918 116.383 112.157 103.855 1.00 60.67 O
ATOM 5 O5' U B1918 118.804 111.848 103.379 1.00 61.73 O
ATOM 6 C5' U B1918 120.005 111.099 103.084 1.00 60.23 C
ATOM 7 C4' U B1918 120.985 111.964 102.329 1.00 59.51 C
ATOM 8 O4' U B1918 120.732 111.900 100.906 1.00 60.27 O
ATOM 9 C3' U B1918 120.926 113.442 102.661 1.00 58.56 C
ATOM 10 O3' U B1918 121.654 113.725 103.842 1.00 58.74 O
ATOM 11 C2' U B1918 121.530 114.076 101.419 1.00 59.53 C
ATOM 12 O2' U B1918 122.940 113.995 101.399 1.00 59.56 O
ATOM 13 C1' U B1918 120.976 113.169 100.321 1.00 59.54 C
ATOM 14 N1 U B1918 119.725 113.636 99.704 1.00 61.07 N
ATOM 15 C2 U B1918 119.783 114.686 98.794 1.00 61.34 C
ATOM 16 O2 U B1918 120.808 115.301 98.541 1.00 59.29 O
ATOM 17 N3 U B1918 118.588 114.990 98.191 1.00 62.37 N
ATOM 18 C4 U B1918 117.367 114.376 98.402 1.00 62.18 C
ATOM 19 O4 U B1918 116.417 114.653 97.672 1.00 62.23 O
ATOM 20 C5 U B1918 117.382 113.346 99.389 1.00 61.98 C
ATOM 21 C6 U B1918 118.526 113.022 99.992 1.00 61.44 C
ATOM 22 P A B1919 121.106 114.827 104.871 1.00 59.41 P
ATOM 23 OP1 A B1919 121.584 114.450 106.216 1.00 61.70 O
ATOM 24 OP2 A B1919 119.655 115.020 104.646 1.00 59.79 O
ATOM 25 O5' A B1919 121.876 116.148 104.435 1.00 58.71 O
TER

Atoms:
OP1: (106.096,116.284,97.031)
OP2: (106.843,114.203,98.357)
C3': (110.972,116.862,97.446)
C1': (111.757,117.129,99.638)
C5': (108.602,117.614,98.029)
O6: (112.471,111.757,102.213)
O4': (110.466,117.712,99.564)
C8: (110.485,115.038,100.297)
C2: (114.623,114.518,101.590)
C6: (112.814,112.882,101.823)
C5: (112.023,113.880,101.196)
C4: (112.617,115.070,100.839)
P: (106.825,115.685,98.178)
C4': (110.080,117.853,98.173)
C2': (112.274,117.028,98.202)
O2': (112.930,118.231,97.861)
N1: (114.130,113.301,101.982)
N2: (115.920,114.733,101.826)
N3: (113.899,115.455,101.007)
N7: (110.679,113.878,100.856)
N9: (111.622,115.807,100.241)
O5': (108.321,116.209,98.134)
O3': (111.081,117.130,96.057)
C4: (117.367,114.376,98.402)
N3: (118.588,114.990,98.191)
OP1: (117.543,109.931,104.365)
OP2: (116.383,112.157,103.855)
C2: (119.783,114.686,98.794)
C1': (120.976,113.169,100.321)
C3': (120.926,113.442,102.661)
O5': (118.804,111.848,103.379)
O4': (120.732,111.900,100.906)
C5': (120.005,111.099,103.084)
P: (117.391,111.127,103.498)
C4': (120.985,111.964,102.329)
C2': (121.530,114.076,101.419)
O2': (122.940,113.995,101.399)
N1: (119.725,113.636,99.704)
O4: (116.417,114.653,97.672)
O2: (120.808,115.301,98.541)
C6: (118.526,113.022,99.992)
C5: (117.382,113.346,99.389)
O3': (121.654,113.725,103.842)
Image (generated by PyMOL):
PyMOL image
show in jmol