ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:B101:B78

Extra

PDB:
ATOM 1 O3' G A 100 36.821 62.652 110.204 1.00 35.98 O
ATOM 2 P G A 101 37.163 61.434 111.185 1.00 37.21 P
ATOM 3 OP1 G A 101 37.598 60.278 110.360 1.00 36.61 O
ATOM 4 OP2 G A 101 36.069 61.265 112.172 1.00 35.83 O
ATOM 5 O5' G A 101 38.449 61.952 111.952 1.00 36.67 O
ATOM 6 C5' G A 101 39.717 61.949 111.302 1.00 37.11 C
ATOM 7 C4' G A 101 40.769 62.413 112.254 1.00 36.77 C
ATOM 8 O4' G A 101 40.471 63.777 112.651 1.00 38.53 O
ATOM 9 C3' G A 101 40.760 61.670 113.571 1.00 36.79 C
ATOM 10 O3' G A 101 41.408 60.415 113.466 1.00 35.60 O
ATOM 11 C2' G A 101 41.481 62.660 114.468 1.00 38.15 C
ATOM 12 O2' G A 101 42.858 62.717 114.153 1.00 38.71 O
ATOM 13 C1' G A 101 40.839 63.968 114.011 1.00 38.53 C
ATOM 14 N9 G A 101 39.638 64.291 114.779 1.00 39.64 N
ATOM 15 C8 G A 101 38.330 64.074 114.413 1.00 39.89 C
ATOM 16 N7 G A 101 37.475 64.471 115.316 1.00 40.14 N
ATOM 17 C5 G A 101 38.265 64.978 116.338 1.00 40.00 C
ATOM 18 C6 G A 101 37.902 65.547 117.577 1.00 40.37 C
ATOM 19 O6 G A 101 36.771 65.719 118.042 1.00 43.40 O
ATOM 20 N1 G A 101 39.018 65.934 118.310 1.00 39.89 N
ATOM 21 C2 G A 101 40.318 65.787 117.907 1.00 39.56 C
ATOM 22 N2 G A 101 41.258 66.218 118.761 1.00 40.49 N
ATOM 23 N3 G A 101 40.672 65.254 116.752 1.00 39.41 N
ATOM 24 C4 G A 101 39.601 64.875 116.023 1.00 39.45 C
ATOM 25 P A A 102 41.542 59.471 114.760 1.00 35.42 P
ATOM 26 OP1 A A 102 41.412 58.110 114.201 1.00 34.41 O
ATOM 27 OP2 A A 102 40.631 59.920 115.821 1.00 36.21 O
ATOM 28 O5' A A 102 43.052 59.695 115.191 1.00 34.67 O
TER

ATOM 1 O3' G B 77 38.812 65.614 122.602 1.00 41.15 O
ATOM 2 P U B 78 39.047 67.136 122.186 1.00 39.92 P
ATOM 3 OP1 U B 78 38.059 67.986 122.905 1.00 39.92 O
ATOM 4 OP2 U B 78 39.157 67.228 120.715 1.00 40.66 O
ATOM 5 O5' U B 78 40.493 67.409 122.773 1.00 41.17 O
ATOM 6 C5' U B 78 40.691 67.605 124.174 1.00 40.21 C
ATOM 7 C4' U B 78 42.084 67.196 124.550 1.00 39.96 C
ATOM 8 O4' U B 78 42.205 65.763 124.414 1.00 40.86 O
ATOM 9 C3' U B 78 43.156 67.747 123.638 1.00 40.05 C
ATOM 10 O3' U B 78 43.480 69.072 124.030 1.00 41.78 O
ATOM 11 C2' U B 78 44.283 66.733 123.806 1.00 39.80 C
ATOM 12 O2' U B 78 45.026 66.870 125.002 1.00 39.96 O
ATOM 13 C1' U B 78 43.490 65.432 123.918 1.00 39.65 C
ATOM 14 N1 U B 78 43.316 64.723 122.646 1.00 40.61 N
ATOM 15 C2 U B 78 44.438 64.194 122.040 1.00 40.74 C
ATOM 16 O2 U B 78 45.567 64.316 122.495 1.00 41.82 O
ATOM 17 N3 U B 78 44.192 63.523 120.871 1.00 40.91 N
ATOM 18 C4 U B 78 42.970 63.339 120.256 1.00 41.40 C
ATOM 19 O4 U B 78 42.908 62.670 119.223 1.00 42.94 O
ATOM 20 C5 U B 78 41.862 63.935 120.937 1.00 42.43 C
ATOM 21 C6 U B 78 42.069 64.587 122.078 1.00 41.11 C
ATOM 22 P A B 79 43.735 70.194 122.909 1.00 43.83 P
ATOM 23 OP1 A B 79 44.252 71.401 123.608 1.00 42.08 O
ATOM 24 OP2 A B 79 42.551 70.315 122.021 1.00 43.11 O
ATOM 25 O5' A B 79 44.928 69.568 122.058 1.00 42.77 O
TER

Atoms:
OP1: (37.598,60.278,110.360)
OP2: (36.069,61.265,112.172)
C3': (40.760,61.670,113.571)
C1': (40.839,63.968,114.011)
C5': (39.717,61.949,111.302)
O6: (36.771,65.719,118.042)
O4': (40.471,63.777,112.651)
C8: (38.330,64.074,114.413)
C2: (40.318,65.787,117.907)
C6: (37.902,65.547,117.577)
C5: (38.265,64.978,116.338)
C4: (39.601,64.875,116.023)
P: (37.163,61.434,111.185)
C4': (40.769,62.413,112.254)
C2': (41.481,62.660,114.468)
O2': (42.858,62.717,114.153)
N1: (39.018,65.934,118.310)
N2: (41.258,66.218,118.761)
N3: (40.672,65.254,116.752)
N7: (37.475,64.471,115.316)
N9: (39.638,64.291,114.779)
O5': (38.449,61.952,111.952)
O3': (41.408,60.415,113.466)
C4: (42.970,63.339,120.256)
N3: (44.192,63.523,120.871)
OP1: (38.059,67.986,122.905)
OP2: (39.157,67.228,120.715)
C2: (44.438,64.194,122.040)
C1': (43.490,65.432,123.918)
C3': (43.156,67.747,123.638)
O5': (40.493,67.409,122.773)
O4': (42.205,65.763,124.414)
C5': (40.691,67.605,124.174)
P: (39.047,67.136,122.186)
C4': (42.084,67.196,124.550)
C2': (44.283,66.733,123.806)
O2': (45.026,66.870,125.002)
N1: (43.316,64.723,122.646)
O4: (42.908,62.670,119.223)
O2: (45.567,64.316,122.495)
C6: (42.069,64.587,122.078)
C5: (41.862,63.935,120.937)
O3': (43.480,69.072,124.030)
Image (generated by PyMOL):
PyMOL image
show in jmol