Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.377 92.633 108.044 1.00 43.45 O
ATOM 2 P G A 556 3.854 92.135 109.482 1.00 43.66 P
ATOM 3 OP1 G A 556 4.872 92.578 110.465 1.00 43.85 O
ATOM 4 OP2 G A 556 3.512 90.695 109.377 1.00 40.80 O
ATOM 5 O5' G A 556 2.511 92.958 109.717 1.00 43.03 O
ATOM 6 C5' G A 556 2.532 94.299 110.222 1.00 45.59 C
ATOM 7 C4' G A 556 1.120 94.784 110.462 1.00 48.50 C
ATOM 8 O4' G A 556 0.419 94.951 109.195 1.00 48.83 O
ATOM 9 C3' G A 556 0.224 93.837 111.244 1.00 49.60 C
ATOM 10 O3' G A 556 0.467 93.899 112.641 1.00 50.65 O
ATOM 11 C2' G A 556 -1.159 94.332 110.848 1.00 49.95 C
ATOM 12 O2' G A 556 -1.474 95.555 111.485 1.00 48.70 O
ATOM 13 C1' G A 556 -0.953 94.594 109.353 1.00 49.05 C
ATOM 14 N9 G A 556 -1.201 93.391 108.559 1.00 46.32 N
ATOM 15 C8 G A 556 -0.273 92.436 108.222 1.00 45.83 C
ATOM 16 N7 G A 556 -0.774 91.453 107.530 1.00 44.95 N
ATOM 17 C5 G A 556 -2.115 91.773 107.395 1.00 44.23 C
ATOM 18 C6 G A 556 -3.150 91.072 106.744 1.00 44.51 C
ATOM 19 O6 G A 556 -3.086 89.989 106.157 1.00 43.60 O
ATOM 20 N1 G A 556 -4.362 91.749 106.826 1.00 43.74 N
ATOM 21 C2 G A 556 -4.553 92.947 107.469 1.00 45.82 C
ATOM 22 N2 G A 556 -5.804 93.438 107.437 1.00 44.79 N
ATOM 23 N3 G A 556 -3.589 93.615 108.095 1.00 45.64 N
ATOM 24 C4 G A 556 -2.400 92.972 108.015 1.00 46.17 C
ATOM 25 P A A 557 -0.002 92.684 113.589 1.00 52.02 P
ATOM 26 OP1 A A 557 0.674 92.911 114.891 1.00 54.13 O
ATOM 27 OP2 A A 557 0.138 91.368 112.914 1.00 50.19 O
ATOM 28 O5' A A 557 -1.557 92.955 113.766 1.00 53.02 O
TER
ATOM 1 O3' G B 576 -7.632 89.107 106.750 1.00 57.29 O
ATOM 2 P U B 577 -7.906 90.178 105.577 1.00 58.31 P
ATOM 3 OP1 U B 577 -8.442 89.489 104.372 1.00 58.28 O
ATOM 4 OP2 U B 577 -6.702 91.036 105.451 1.00 62.95 O
ATOM 5 O5' U B 577 -9.046 91.102 106.194 1.00 58.57 O
ATOM 6 C5' U B 577 -10.370 90.585 106.463 1.00 57.89 C
ATOM 7 C4' U B 577 -10.956 91.263 107.681 1.00 57.85 C
ATOM 8 O4' U B 577 -10.323 90.762 108.890 1.00 58.03 O
ATOM 9 C3' U B 577 -10.737 92.762 107.734 1.00 58.11 C
ATOM 10 O3' U B 577 -11.688 93.461 106.932 1.00 58.72 O
ATOM 11 C2' U B 577 -10.844 93.063 109.224 1.00 58.82 C
ATOM 12 O2' U B 577 -12.179 93.152 109.671 1.00 60.99 O
ATOM 13 C1' U B 577 -10.198 91.815 109.840 1.00 58.30 C
ATOM 14 N1 U B 577 -8.778 91.950 110.232 1.00 57.72 N
ATOM 15 C2 U B 577 -8.430 92.959 111.130 1.00 57.26 C
ATOM 16 O2 U B 577 -9.236 93.746 111.600 1.00 57.80 O
ATOM 17 N3 U B 577 -7.096 93.013 111.455 1.00 58.01 N
ATOM 18 C4 U B 577 -6.086 92.189 110.992 1.00 57.23 C
ATOM 19 O4 U B 577 -4.928 92.374 111.380 1.00 55.41 O
ATOM 20 C5 U B 577 -6.515 91.175 110.077 1.00 55.63 C
ATOM 21 C6 U B 577 -7.808 91.093 109.733 1.00 57.55 C
ATOM 22 P A B 578 -11.246 94.804 106.165 1.00 60.08 P
ATOM 23 OP1 A B 578 -12.382 95.314 105.355 1.00 60.54 O
ATOM 24 OP2 A B 578 -9.940 94.547 105.507 1.00 58.88 O
ATOM 25 O5' A B 578 -11.015 95.836 107.347 1.00 58.50 O
TER
ATOM 2 P G A 556 3.854 92.135 109.482 1.00 43.66 P
ATOM 3 OP1 G A 556 4.872 92.578 110.465 1.00 43.85 O
ATOM 4 OP2 G A 556 3.512 90.695 109.377 1.00 40.80 O
ATOM 5 O5' G A 556 2.511 92.958 109.717 1.00 43.03 O
ATOM 6 C5' G A 556 2.532 94.299 110.222 1.00 45.59 C
ATOM 7 C4' G A 556 1.120 94.784 110.462 1.00 48.50 C
ATOM 8 O4' G A 556 0.419 94.951 109.195 1.00 48.83 O
ATOM 9 C3' G A 556 0.224 93.837 111.244 1.00 49.60 C
ATOM 10 O3' G A 556 0.467 93.899 112.641 1.00 50.65 O
ATOM 11 C2' G A 556 -1.159 94.332 110.848 1.00 49.95 C
ATOM 12 O2' G A 556 -1.474 95.555 111.485 1.00 48.70 O
ATOM 13 C1' G A 556 -0.953 94.594 109.353 1.00 49.05 C
ATOM 14 N9 G A 556 -1.201 93.391 108.559 1.00 46.32 N
ATOM 15 C8 G A 556 -0.273 92.436 108.222 1.00 45.83 C
ATOM 16 N7 G A 556 -0.774 91.453 107.530 1.00 44.95 N
ATOM 17 C5 G A 556 -2.115 91.773 107.395 1.00 44.23 C
ATOM 18 C6 G A 556 -3.150 91.072 106.744 1.00 44.51 C
ATOM 19 O6 G A 556 -3.086 89.989 106.157 1.00 43.60 O
ATOM 20 N1 G A 556 -4.362 91.749 106.826 1.00 43.74 N
ATOM 21 C2 G A 556 -4.553 92.947 107.469 1.00 45.82 C
ATOM 22 N2 G A 556 -5.804 93.438 107.437 1.00 44.79 N
ATOM 23 N3 G A 556 -3.589 93.615 108.095 1.00 45.64 N
ATOM 24 C4 G A 556 -2.400 92.972 108.015 1.00 46.17 C
ATOM 25 P A A 557 -0.002 92.684 113.589 1.00 52.02 P
ATOM 26 OP1 A A 557 0.674 92.911 114.891 1.00 54.13 O
ATOM 27 OP2 A A 557 0.138 91.368 112.914 1.00 50.19 O
ATOM 28 O5' A A 557 -1.557 92.955 113.766 1.00 53.02 O
TER
ATOM 1 O3' G B 576 -7.632 89.107 106.750 1.00 57.29 O
ATOM 2 P U B 577 -7.906 90.178 105.577 1.00 58.31 P
ATOM 3 OP1 U B 577 -8.442 89.489 104.372 1.00 58.28 O
ATOM 4 OP2 U B 577 -6.702 91.036 105.451 1.00 62.95 O
ATOM 5 O5' U B 577 -9.046 91.102 106.194 1.00 58.57 O
ATOM 6 C5' U B 577 -10.370 90.585 106.463 1.00 57.89 C
ATOM 7 C4' U B 577 -10.956 91.263 107.681 1.00 57.85 C
ATOM 8 O4' U B 577 -10.323 90.762 108.890 1.00 58.03 O
ATOM 9 C3' U B 577 -10.737 92.762 107.734 1.00 58.11 C
ATOM 10 O3' U B 577 -11.688 93.461 106.932 1.00 58.72 O
ATOM 11 C2' U B 577 -10.844 93.063 109.224 1.00 58.82 C
ATOM 12 O2' U B 577 -12.179 93.152 109.671 1.00 60.99 O
ATOM 13 C1' U B 577 -10.198 91.815 109.840 1.00 58.30 C
ATOM 14 N1 U B 577 -8.778 91.950 110.232 1.00 57.72 N
ATOM 15 C2 U B 577 -8.430 92.959 111.130 1.00 57.26 C
ATOM 16 O2 U B 577 -9.236 93.746 111.600 1.00 57.80 O
ATOM 17 N3 U B 577 -7.096 93.013 111.455 1.00 58.01 N
ATOM 18 C4 U B 577 -6.086 92.189 110.992 1.00 57.23 C
ATOM 19 O4 U B 577 -4.928 92.374 111.380 1.00 55.41 O
ATOM 20 C5 U B 577 -6.515 91.175 110.077 1.00 55.63 C
ATOM 21 C6 U B 577 -7.808 91.093 109.733 1.00 57.55 C
ATOM 22 P A B 578 -11.246 94.804 106.165 1.00 60.08 P
ATOM 23 OP1 A B 578 -12.382 95.314 105.355 1.00 60.54 O
ATOM 24 OP2 A B 578 -9.940 94.547 105.507 1.00 58.88 O
ATOM 25 O5' A B 578 -11.015 95.836 107.347 1.00 58.50 O
TER
Atoms:
OP1: (4.872,92.578,110.465)
OP2: (3.512,90.695,109.377)
C3': (0.224,93.837,111.244)
C1': (-0.953,94.594,109.353)
C5': (2.532,94.299,110.222)
O6: (-3.086,89.989,106.157)
O4': (0.419,94.951,109.195)
C8: (-0.273,92.436,108.222)
C2: (-4.553,92.947,107.469)
C6: (-3.150,91.072,106.744)
C5: (-2.115,91.773,107.395)
C4: (-2.400,92.972,108.015)
P: (3.854,92.135,109.482)
C4': (1.120,94.784,110.462)
C2': (-1.159,94.332,110.848)
O2': (-1.474,95.555,111.485)
N1: (-4.362,91.749,106.826)
N2: (-5.804,93.438,107.437)
N3: (-3.589,93.615,108.095)
N7: (-0.774,91.453,107.530)
N9: (-1.201,93.391,108.559)
O5': (2.511,92.958,109.717)
O3': (0.467,93.899,112.641)
OP2: (3.512,90.695,109.377)
C3': (0.224,93.837,111.244)
C1': (-0.953,94.594,109.353)
C5': (2.532,94.299,110.222)
O6: (-3.086,89.989,106.157)
O4': (0.419,94.951,109.195)
C8: (-0.273,92.436,108.222)
C2: (-4.553,92.947,107.469)
C6: (-3.150,91.072,106.744)
C5: (-2.115,91.773,107.395)
C4: (-2.400,92.972,108.015)
P: (3.854,92.135,109.482)
C4': (1.120,94.784,110.462)
C2': (-1.159,94.332,110.848)
O2': (-1.474,95.555,111.485)
N1: (-4.362,91.749,106.826)
N2: (-5.804,93.438,107.437)
N3: (-3.589,93.615,108.095)
N7: (-0.774,91.453,107.530)
N9: (-1.201,93.391,108.559)
O5': (2.511,92.958,109.717)
O3': (0.467,93.899,112.641)
C4: (-6.086,92.189,110.992)
N3: (-7.096,93.013,111.455)
OP1: (-8.442,89.489,104.372)
OP2: (-6.702,91.036,105.451)
C2: (-8.430,92.959,111.130)
C1': (-10.198,91.815,109.840)
C3': (-10.737,92.762,107.734)
O5': (-9.046,91.102,106.194)
O4': (-10.323,90.762,108.890)
C5': (-10.370,90.585,106.463)
P: (-7.906,90.178,105.577)
C4': (-10.956,91.263,107.681)
C2': (-10.844,93.063,109.224)
O2': (-12.179,93.152,109.671)
N1: (-8.778,91.950,110.232)
O4: (-4.928,92.374,111.380)
O2: (-9.236,93.746,111.600)
C6: (-7.808,91.093,109.733)
C5: (-6.515,91.175,110.077)
O3': (-11.688,93.461,106.932)
N3: (-7.096,93.013,111.455)
OP1: (-8.442,89.489,104.372)
OP2: (-6.702,91.036,105.451)
C2: (-8.430,92.959,111.130)
C1': (-10.198,91.815,109.840)
C3': (-10.737,92.762,107.734)
O5': (-9.046,91.102,106.194)
O4': (-10.323,90.762,108.890)
C5': (-10.370,90.585,106.463)
P: (-7.906,90.178,105.577)
C4': (-10.956,91.263,107.681)
C2': (-10.844,93.063,109.224)
O2': (-12.179,93.152,109.671)
N1: (-8.778,91.950,110.232)
O4: (-4.928,92.374,111.380)
O2: (-9.236,93.746,111.600)
C6: (-7.808,91.093,109.733)
C5: (-6.515,91.175,110.077)
O3': (-11.688,93.461,106.932)
Image (generated by PyMOL):