Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q9A:A17:A9
Extra
PDB:
ATOM 1 O3' G A 16 9.472 -51.928 -14.314 1.00 16.51 O
ATOM 2 P G A 17 9.804 -50.511 -13.643 1.00 16.53 P
ATOM 3 OP1 G A 17 11.273 -50.407 -13.523 1.00 19.06 O
ATOM 4 OP2 G A 17 8.948 -50.333 -12.440 1.00 18.69 O
ATOM 5 O5' G A 17 9.263 -49.473 -14.723 1.00 15.41 O
ATOM 6 C5' G A 17 9.821 -49.351 -16.036 1.00 15.90 C
ATOM 7 C4' G A 17 8.975 -48.409 -16.871 1.00 14.86 C
ATOM 8 O4' G A 17 7.609 -48.881 -16.934 1.00 14.01 O
ATOM 9 C3' G A 17 8.808 -47.008 -16.266 1.00 14.19 C
ATOM 10 O3' G A 17 9.975 -46.231 -16.518 1.00 14.47 O
ATOM 11 C2' G A 17 7.572 -46.520 -17.022 1.00 13.26 C
ATOM 12 O2' G A 17 7.839 -46.312 -18.391 1.00 14.50 O
ATOM 13 C1' G A 17 6.706 -47.787 -16.931 1.00 13.51 C
ATOM 14 N9 G A 17 5.916 -47.814 -15.708 1.00 13.18 N
ATOM 15 C8 G A 17 6.185 -48.539 -14.572 1.00 14.49 C
ATOM 16 N7 G A 17 5.300 -48.363 -13.637 1.00 15.88 N
ATOM 17 C5 G A 17 4.389 -47.470 -14.178 1.00 15.36 C
ATOM 18 C6 G A 17 3.211 -46.902 -13.634 1.00 16.38 C
ATOM 19 O6 G A 17 2.724 -47.108 -12.487 1.00 19.24 O
ATOM 20 N1 G A 17 2.569 -46.037 -14.507 1.00 15.81 N
ATOM 21 C2 G A 17 3.021 -45.751 -15.776 1.00 13.86 C
ATOM 22 N2 G A 17 2.265 -44.890 -16.472 1.00 14.89 N
ATOM 23 N3 G A 17 4.130 -46.278 -16.305 1.00 13.54 N
ATOM 24 C4 G A 17 4.758 -47.120 -15.460 1.00 13.70 C
ATOM 25 P A A 18 10.283 -44.959 -15.597 1.00 14.83 P
ATOM 26 OP1 A A 18 11.688 -44.578 -15.831 1.00 16.52 O
ATOM 27 OP2 A A 18 9.798 -45.227 -14.226 1.00 16.29 O
ATOM 28 O5' A A 18 9.307 -43.844 -16.193 1.00 14.09 O
TER
ATOM 1 O3' G B 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 2 P U B 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U B 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U B 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U B 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U B 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U B 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U B 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U B 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U B 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U B 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U B 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U B 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U B 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U B 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U B 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U B 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U B 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U B 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U B 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U B 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A B 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A B 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A B 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A B 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
ATOM 2 P G A 17 9.804 -50.511 -13.643 1.00 16.53 P
ATOM 3 OP1 G A 17 11.273 -50.407 -13.523 1.00 19.06 O
ATOM 4 OP2 G A 17 8.948 -50.333 -12.440 1.00 18.69 O
ATOM 5 O5' G A 17 9.263 -49.473 -14.723 1.00 15.41 O
ATOM 6 C5' G A 17 9.821 -49.351 -16.036 1.00 15.90 C
ATOM 7 C4' G A 17 8.975 -48.409 -16.871 1.00 14.86 C
ATOM 8 O4' G A 17 7.609 -48.881 -16.934 1.00 14.01 O
ATOM 9 C3' G A 17 8.808 -47.008 -16.266 1.00 14.19 C
ATOM 10 O3' G A 17 9.975 -46.231 -16.518 1.00 14.47 O
ATOM 11 C2' G A 17 7.572 -46.520 -17.022 1.00 13.26 C
ATOM 12 O2' G A 17 7.839 -46.312 -18.391 1.00 14.50 O
ATOM 13 C1' G A 17 6.706 -47.787 -16.931 1.00 13.51 C
ATOM 14 N9 G A 17 5.916 -47.814 -15.708 1.00 13.18 N
ATOM 15 C8 G A 17 6.185 -48.539 -14.572 1.00 14.49 C
ATOM 16 N7 G A 17 5.300 -48.363 -13.637 1.00 15.88 N
ATOM 17 C5 G A 17 4.389 -47.470 -14.178 1.00 15.36 C
ATOM 18 C6 G A 17 3.211 -46.902 -13.634 1.00 16.38 C
ATOM 19 O6 G A 17 2.724 -47.108 -12.487 1.00 19.24 O
ATOM 20 N1 G A 17 2.569 -46.037 -14.507 1.00 15.81 N
ATOM 21 C2 G A 17 3.021 -45.751 -15.776 1.00 13.86 C
ATOM 22 N2 G A 17 2.265 -44.890 -16.472 1.00 14.89 N
ATOM 23 N3 G A 17 4.130 -46.278 -16.305 1.00 13.54 N
ATOM 24 C4 G A 17 4.758 -47.120 -15.460 1.00 13.70 C
ATOM 25 P A A 18 10.283 -44.959 -15.597 1.00 14.83 P
ATOM 26 OP1 A A 18 11.688 -44.578 -15.831 1.00 16.52 O
ATOM 27 OP2 A A 18 9.798 -45.227 -14.226 1.00 16.29 O
ATOM 28 O5' A A 18 9.307 -43.844 -16.193 1.00 14.09 O
TER
ATOM 1 O3' G B 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 2 P U B 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U B 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U B 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U B 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U B 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U B 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U B 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U B 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U B 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U B 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U B 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U B 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U B 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U B 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U B 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U B 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U B 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U B 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U B 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U B 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A B 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A B 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A B 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A B 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
Atoms:
OP1: (11.273,-50.407,-13.523)
OP2: (8.948,-50.333,-12.440)
C3': (8.808,-47.008,-16.266)
C1': (6.706,-47.787,-16.931)
C5': (9.821,-49.351,-16.036)
O6: (2.724,-47.108,-12.487)
O4': (7.609,-48.881,-16.934)
C8: (6.185,-48.539,-14.572)
C2: (3.021,-45.751,-15.776)
C6: (3.211,-46.902,-13.634)
C5: (4.389,-47.470,-14.178)
C4: (4.758,-47.120,-15.460)
P: (9.804,-50.511,-13.643)
C4': (8.975,-48.409,-16.871)
C2': (7.572,-46.520,-17.022)
O2': (7.839,-46.312,-18.391)
N1: (2.569,-46.037,-14.507)
N2: (2.265,-44.890,-16.472)
N3: (4.130,-46.278,-16.305)
N7: (5.300,-48.363,-13.637)
N9: (5.916,-47.814,-15.708)
O5': (9.263,-49.473,-14.723)
O3': (9.975,-46.231,-16.518)
OP2: (8.948,-50.333,-12.440)
C3': (8.808,-47.008,-16.266)
C1': (6.706,-47.787,-16.931)
C5': (9.821,-49.351,-16.036)
O6: (2.724,-47.108,-12.487)
O4': (7.609,-48.881,-16.934)
C8: (6.185,-48.539,-14.572)
C2: (3.021,-45.751,-15.776)
C6: (3.211,-46.902,-13.634)
C5: (4.389,-47.470,-14.178)
C4: (4.758,-47.120,-15.460)
P: (9.804,-50.511,-13.643)
C4': (8.975,-48.409,-16.871)
C2': (7.572,-46.520,-17.022)
O2': (7.839,-46.312,-18.391)
N1: (2.569,-46.037,-14.507)
N2: (2.265,-44.890,-16.472)
N3: (4.130,-46.278,-16.305)
N7: (5.300,-48.363,-13.637)
N9: (5.916,-47.814,-15.708)
O5': (9.263,-49.473,-14.723)
O3': (9.975,-46.231,-16.518)
C4: (4.302,-42.047,-16.176)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
Image (generated by PyMOL):