ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0523:02010

Extra

PDB:
ATOM 1 O3' C A 522 25.511 131.379 109.935 1.00 57.71 O
ATOM 2 P G A 523 25.578 129.781 110.087 1.00 59.04 P
ATOM 3 OP1 G A 523 24.403 129.236 109.349 1.00 59.57 O
ATOM 4 OP2 G A 523 25.799 129.397 111.518 1.00 58.29 O
ATOM 5 O5' G A 523 26.877 129.411 109.249 1.00 56.85 O
ATOM 6 C5' G A 523 27.019 129.890 107.911 1.00 53.37 C
ATOM 7 C4' G A 523 28.252 129.315 107.271 1.00 51.77 C
ATOM 8 O4' G A 523 29.432 129.885 107.891 1.00 51.59 O
ATOM 9 C3' G A 523 28.438 127.804 107.354 1.00 51.42 C
ATOM 10 O3' G A 523 29.046 127.446 106.125 1.00 52.85 O
ATOM 11 C2' G A 523 29.471 127.665 108.473 1.00 49.75 C
ATOM 12 O2' G A 523 30.246 126.493 108.407 1.00 50.38 O
ATOM 13 C1' G A 523 30.352 128.852 108.139 1.00 50.19 C
ATOM 14 N9 G A 523 31.337 129.323 109.102 1.00 50.30 N
ATOM 15 C8 G A 523 31.224 129.434 110.465 1.00 50.88 C
ATOM 16 N7 G A 523 32.276 129.974 111.018 1.00 49.64 N
ATOM 17 C5 G A 523 33.132 130.220 109.956 1.00 48.34 C
ATOM 18 C6 G A 523 34.404 130.818 109.927 1.00 47.90 C
ATOM 19 O6 G A 523 35.047 131.297 110.860 1.00 48.94 O
ATOM 20 N1 G A 523 34.925 130.844 108.642 1.00 46.97 N
ATOM 21 C2 G A 523 34.295 130.367 107.528 1.00 46.78 C
ATOM 22 N2 G A 523 34.970 130.443 106.381 1.00 48.91 N
ATOM 23 N3 G A 523 33.096 129.842 107.537 1.00 46.92 N
ATOM 24 C4 G A 523 32.577 129.797 108.775 1.00 48.72 C
ATOM 25 P A A 524 28.551 126.148 105.336 1.00 55.70 P
ATOM 26 OP1 A A 524 27.138 126.359 104.932 1.00 55.39 O
ATOM 27 OP2 A A 524 28.912 124.951 106.143 1.00 54.21 O
ATOM 28 O5' A A 524 29.476 126.148 104.039 1.00 54.96 O
TER

ATOM 1 O3' U B2009 38.387 133.554 107.958 1.00 39.41 O
ATOM 2 P U B2010 38.601 132.212 107.105 1.00 41.67 P
ATOM 3 OP1 U B2010 39.323 132.620 105.891 1.00 39.92 O
ATOM 4 OP2 U B2010 37.319 131.491 106.983 1.00 43.36 O
ATOM 5 O5' U B2010 39.526 131.291 108.011 1.00 39.66 O
ATOM 6 C5' U B2010 40.695 131.818 108.617 1.00 41.10 C
ATOM 7 C4' U B2010 40.476 132.028 110.101 1.00 42.90 C
ATOM 8 O4' U B2010 39.061 131.994 110.443 1.00 44.20 O
ATOM 9 C3' U B2010 41.067 130.980 111.017 1.00 41.88 C
ATOM 10 O3' U B2010 42.463 131.182 111.155 1.00 41.05 O
ATOM 11 C2' U B2010 40.307 131.238 112.310 1.00 41.42 C
ATOM 12 O2' U B2010 40.729 132.418 112.948 1.00 40.65 O
ATOM 13 C1' U B2010 38.909 131.525 111.776 1.00 42.06 C
ATOM 14 N1 U B2010 38.001 130.364 111.796 1.00 42.50 N
ATOM 15 C2 U B2010 37.545 129.929 113.029 1.00 43.79 C
ATOM 16 O2 U B2010 37.900 130.427 114.074 1.00 47.08 O
ATOM 17 N3 U B2010 36.659 128.885 112.992 1.00 42.82 N
ATOM 18 C4 U B2010 36.198 128.233 111.878 1.00 44.33 C
ATOM 19 O4 U B2010 35.417 127.292 112.006 1.00 45.48 O
ATOM 20 C5 U B2010 36.727 128.719 110.645 1.00 45.31 C
ATOM 21 C6 U B2010 37.594 129.741 110.646 1.00 44.42 C
ATOM 22 P C B2011 43.407 129.938 111.504 1.00 40.64 P
ATOM 23 OP1 C B2011 44.803 130.417 111.425 1.00 42.33 O
ATOM 24 OP2 C B2011 42.993 128.761 110.697 1.00 41.14 O
ATOM 25 O5' C B2011 43.063 129.645 113.026 1.00 40.49 O
TER

Atoms:
OP1: (24.403,129.236,109.349)
OP2: (25.799,129.397,111.518)
C3': (28.438,127.804,107.354)
C1': (30.352,128.852,108.139)
C5': (27.019,129.890,107.911)
O6: (35.047,131.297,110.860)
O4': (29.432,129.885,107.891)
C8: (31.224,129.434,110.465)
C2: (34.295,130.367,107.528)
C6: (34.404,130.818,109.927)
C5: (33.132,130.220,109.956)
C4: (32.577,129.797,108.775)
P: (25.578,129.781,110.087)
C4': (28.252,129.315,107.271)
C2': (29.471,127.665,108.473)
O2': (30.246,126.493,108.407)
N1: (34.925,130.844,108.642)
N2: (34.970,130.443,106.381)
N3: (33.096,129.842,107.537)
N7: (32.276,129.974,111.018)
N9: (31.337,129.323,109.102)
O5': (26.877,129.411,109.249)
O3': (29.046,127.446,106.125)
C4: (36.198,128.233,111.878)
N3: (36.659,128.885,112.992)
OP1: (39.323,132.620,105.891)
OP2: (37.319,131.491,106.983)
C2: (37.545,129.929,113.029)
C1': (38.909,131.525,111.776)
C3': (41.067,130.980,111.017)
O5': (39.526,131.291,108.011)
O4': (39.061,131.994,110.443)
C5': (40.695,131.818,108.617)
P: (38.601,132.212,107.105)
C4': (40.476,132.028,110.101)
C2': (40.307,131.238,112.310)
O2': (40.729,132.418,112.948)
N1: (38.001,130.364,111.796)
O4: (35.417,127.292,112.006)
O2: (37.900,130.427,114.074)
C6: (37.594,129.741,110.646)
C5: (36.727,128.719,110.645)
O3': (42.463,131.182,111.155)
Image (generated by PyMOL):
PyMOL image
show in jmol