ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0523:02010

Extra

PDB:
ATOM 1 O3' C A 522 25.401 131.170 109.607 1.00 48.14 O
ATOM 2 P G A 523 25.629 129.582 109.730 1.00 49.61 P
ATOM 3 OP1 G A 523 24.533 128.921 108.981 1.00 50.73 O
ATOM 4 OP2 G A 523 25.874 129.205 111.157 1.00 49.49 O
ATOM 5 O5' G A 523 26.978 129.351 108.919 1.00 46.58 O
ATOM 6 C5' G A 523 27.050 129.646 107.522 1.00 41.64 C
ATOM 7 C4' G A 523 28.263 128.990 106.919 1.00 40.09 C
ATOM 8 O4' G A 523 29.458 129.595 107.472 1.00 39.28 O
ATOM 9 C3' G A 523 28.416 127.493 107.175 1.00 39.57 C
ATOM 10 O3' G A 523 29.098 126.957 106.059 1.00 41.62 O
ATOM 11 C2' G A 523 29.402 127.465 108.332 1.00 39.07 C
ATOM 12 O2' G A 523 30.116 126.255 108.425 1.00 39.91 O
ATOM 13 C1' G A 523 30.330 128.574 107.877 1.00 39.79 C
ATOM 14 N9 G A 523 31.305 129.119 108.810 1.00 41.87 N
ATOM 15 C8 G A 523 31.204 129.262 110.171 1.00 43.25 C
ATOM 16 N7 G A 523 32.258 129.819 110.702 1.00 42.54 N
ATOM 17 C5 G A 523 33.101 130.048 109.626 1.00 42.27 C
ATOM 18 C6 G A 523 34.384 130.632 109.576 1.00 43.25 C
ATOM 19 O6 G A 523 35.065 131.081 110.507 1.00 44.10 O
ATOM 20 N1 G A 523 34.876 130.665 108.277 1.00 42.51 N
ATOM 21 C2 G A 523 34.220 130.188 107.174 1.00 42.76 C
ATOM 22 N2 G A 523 34.865 130.281 106.006 1.00 44.35 N
ATOM 23 N3 G A 523 33.023 129.650 107.209 1.00 41.86 N
ATOM 24 C4 G A 523 32.527 129.612 108.456 1.00 41.83 C
ATOM 25 P A A 524 28.333 126.000 105.038 1.00 44.41 P
ATOM 26 OP1 A A 524 27.105 126.711 104.610 1.00 45.65 O
ATOM 27 OP2 A A 524 28.229 124.641 105.625 1.00 43.61 O
ATOM 28 O5' A A 524 29.333 125.936 103.802 1.00 43.93 O
TER

ATOM 1 O3' U B2009 38.322 133.382 107.607 1.00 39.56 O
ATOM 2 P U B2010 38.487 132.036 106.737 1.00 42.68 P
ATOM 3 OP1 U B2010 39.279 132.383 105.535 1.00 43.13 O
ATOM 4 OP2 U B2010 37.160 131.421 106.574 1.00 44.08 O
ATOM 5 O5' U B2010 39.336 131.056 107.659 1.00 41.78 O
ATOM 6 C5' U B2010 40.558 131.500 108.251 1.00 43.02 C
ATOM 7 C4' U B2010 40.353 131.806 109.717 1.00 41.97 C
ATOM 8 O4' U B2010 38.941 131.782 110.051 1.00 42.98 O
ATOM 9 C3' U B2010 40.944 130.794 110.670 1.00 41.26 C
ATOM 10 O3' U B2010 42.332 130.995 110.827 1.00 39.74 O
ATOM 11 C2' U B2010 40.172 131.067 111.947 1.00 41.70 C
ATOM 12 O2' U B2010 40.607 132.240 112.593 1.00 44.45 O
ATOM 13 C1' U B2010 38.779 131.342 111.392 1.00 42.36 C
ATOM 14 N1 U B2010 37.886 130.172 111.424 1.00 41.76 N
ATOM 15 C2 U B2010 37.323 129.832 112.641 1.00 41.93 C
ATOM 16 O2 U B2010 37.571 130.419 113.674 1.00 44.24 O
ATOM 17 N3 U B2010 36.461 128.771 112.606 1.00 41.72 N
ATOM 18 C4 U B2010 36.117 128.023 111.512 1.00 42.36 C
ATOM 19 O4 U B2010 35.292 127.121 111.634 1.00 43.12 O
ATOM 20 C5 U B2010 36.759 128.415 110.298 1.00 42.48 C
ATOM 21 C6 U B2010 37.601 129.449 110.296 1.00 42.00 C
ATOM 22 P C B2011 43.267 129.738 111.128 1.00 40.30 P
ATOM 23 OP1 C B2011 44.673 130.171 110.989 1.00 41.43 O
ATOM 24 OP2 C B2011 42.775 128.583 110.334 1.00 40.04 O
ATOM 25 O5' C B2011 42.962 129.417 112.653 1.00 38.96 O
TER

Atoms:
OP1: (24.533,128.921,108.981)
OP2: (25.874,129.205,111.157)
C3': (28.416,127.493,107.175)
C1': (30.330,128.574,107.877)
C5': (27.050,129.646,107.522)
O6: (35.065,131.081,110.507)
O4': (29.458,129.595,107.472)
C8: (31.204,129.262,110.171)
C2: (34.220,130.188,107.174)
C6: (34.384,130.632,109.576)
C5: (33.101,130.048,109.626)
C4: (32.527,129.612,108.456)
P: (25.629,129.582,109.730)
C4': (28.263,128.990,106.919)
C2': (29.402,127.465,108.332)
O2': (30.116,126.255,108.425)
N1: (34.876,130.665,108.277)
N2: (34.865,130.281,106.006)
N3: (33.023,129.650,107.209)
N7: (32.258,129.819,110.702)
N9: (31.305,129.119,108.810)
O5': (26.978,129.351,108.919)
O3': (29.098,126.957,106.059)
C4: (36.117,128.023,111.512)
N3: (36.461,128.771,112.606)
OP1: (39.279,132.383,105.535)
OP2: (37.160,131.421,106.574)
C2: (37.323,129.832,112.641)
C1': (38.779,131.342,111.392)
C3': (40.944,130.794,110.670)
O5': (39.336,131.056,107.659)
O4': (38.941,131.782,110.051)
C5': (40.558,131.500,108.251)
P: (38.487,132.036,106.737)
C4': (40.353,131.806,109.717)
C2': (40.172,131.067,111.947)
O2': (40.607,132.240,112.593)
N1: (37.886,130.172,111.424)
O4: (35.292,127.121,111.634)
O2: (37.571,130.419,113.674)
C6: (37.601,129.449,110.296)
C5: (36.759,128.415,110.298)
O3': (42.332,130.995,110.827)
Image (generated by PyMOL):
PyMOL image
show in jmol