Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5541:5562
Extra
PDB:
ATOM 1 O3' G A 540 73.375 -14.079 246.648 1.00 52.67 O
ATOM 2 P G A 541 72.786 -13.618 245.198 1.00 55.23 P
ATOM 3 OP1 G A 541 73.328 -14.526 244.166 1.00 55.19 O
ATOM 4 OP2 G A 541 73.018 -12.171 245.059 1.00 55.00 O
ATOM 5 O5' G A 541 71.250 -13.898 245.369 1.00 55.81 O
ATOM 6 C5' G A 541 70.818 -15.004 246.143 1.00 56.07 C
ATOM 7 C4' G A 541 69.408 -14.827 246.598 1.00 56.55 C
ATOM 8 O4' G A 541 69.357 -13.728 247.526 1.00 56.42 O
ATOM 9 C3' G A 541 68.422 -14.485 245.495 1.00 56.91 C
ATOM 10 O3' G A 541 67.116 -14.876 245.917 1.00 57.43 O
ATOM 11 C2' G A 541 68.474 -12.977 245.491 1.00 56.72 C
ATOM 12 O2' G A 541 67.335 -12.368 244.897 1.00 57.09 O
ATOM 13 C1' G A 541 68.549 -12.707 246.994 1.00 56.62 C
ATOM 14 N9 G A 541 69.167 -11.456 247.354 1.00 56.25 N
ATOM 15 C8 G A 541 70.331 -10.981 246.818 1.00 55.78 C
ATOM 16 N7 G A 541 70.709 -9.857 247.352 1.00 55.53 N
ATOM 17 C5 G A 541 69.728 -9.625 248.306 1.00 55.85 C
ATOM 18 C6 G A 541 69.648 -8.549 249.184 1.00 55.77 C
ATOM 19 O6 G A 541 70.504 -7.671 249.194 1.00 55.38 O
ATOM 20 N1 G A 541 68.537 -8.616 250.032 1.00 56.18 N
ATOM 21 C2 G A 541 67.627 -9.643 249.996 1.00 56.62 C
ATOM 22 N2 G A 541 66.631 -9.558 250.877 1.00 56.98 N
ATOM 23 N3 G A 541 67.677 -10.680 249.167 1.00 56.70 N
ATOM 24 C4 G A 541 68.761 -10.603 248.351 1.00 56.30 C
ATOM 25 P A A 542 66.494 -16.302 245.518 1.00 58.81 P
ATOM 26 OP1 A A 542 67.083 -17.346 246.441 1.00 58.70 O
ATOM 27 OP2 A A 542 66.664 -16.461 244.042 1.00 58.82 O
ATOM 28 O5' A A 542 64.967 -16.073 245.867 1.00 59.36 O
TER
ATOM 1 O3' A B 561 67.823 -6.486 254.583 1.00 50.50 O
ATOM 2 P U B 562 67.091 -6.684 253.147 1.00 47.73 P
ATOM 3 OP1 U B 562 66.758 -8.124 253.020 1.00 47.97 O
ATOM 4 OP2 U B 562 68.008 -6.054 252.108 1.00 47.33 O
ATOM 5 O5' U B 562 65.743 -5.861 253.283 1.00 48.19 O
ATOM 6 C5' U B 562 65.737 -4.480 253.588 1.00 48.10 C
ATOM 7 C4' U B 562 64.898 -4.221 254.805 1.00 48.44 C
ATOM 8 O4' U B 562 65.757 -4.057 255.966 1.00 48.12 O
ATOM 9 C3' U B 562 64.039 -2.968 254.793 1.00 48.70 C
ATOM 10 O3' U B 562 62.846 -3.137 254.051 1.00 49.16 O
ATOM 11 C2' U B 562 63.808 -2.742 256.285 1.00 48.82 C
ATOM 12 O2' U B 562 62.831 -3.651 256.787 1.00 49.28 O
ATOM 13 C1' U B 562 65.182 -3.143 256.860 1.00 48.32 C
ATOM 14 N1 U B 562 66.092 -2.017 256.969 1.00 47.91 N
ATOM 15 C2 U B 562 65.970 -1.159 258.017 1.00 47.96 C
ATOM 16 O2 U B 562 65.118 -1.308 258.853 1.00 48.33 O
ATOM 17 N3 U B 562 66.895 -0.138 258.030 1.00 47.56 N
ATOM 18 C4 U B 562 67.893 0.046 257.094 1.00 47.13 C
ATOM 19 O4 U B 562 68.634 0.999 257.199 1.00 46.82 O
ATOM 20 C5 U B 562 67.965 -0.902 256.034 1.00 47.11 C
ATOM 21 C6 U B 562 67.066 -1.882 256.009 1.00 47.50 C
ATOM 22 P G B 563 62.102 -1.886 253.333 1.00 48.69 P
ATOM 23 OP1 G B 563 61.007 -2.461 252.539 1.00 49.15 O
ATOM 24 OP2 G B 563 63.116 -1.081 252.646 1.00 48.23 O
ATOM 25 O5' G B 563 61.514 -1.070 254.563 1.00 48.91 O
TER
ATOM 2 P G A 541 72.786 -13.618 245.198 1.00 55.23 P
ATOM 3 OP1 G A 541 73.328 -14.526 244.166 1.00 55.19 O
ATOM 4 OP2 G A 541 73.018 -12.171 245.059 1.00 55.00 O
ATOM 5 O5' G A 541 71.250 -13.898 245.369 1.00 55.81 O
ATOM 6 C5' G A 541 70.818 -15.004 246.143 1.00 56.07 C
ATOM 7 C4' G A 541 69.408 -14.827 246.598 1.00 56.55 C
ATOM 8 O4' G A 541 69.357 -13.728 247.526 1.00 56.42 O
ATOM 9 C3' G A 541 68.422 -14.485 245.495 1.00 56.91 C
ATOM 10 O3' G A 541 67.116 -14.876 245.917 1.00 57.43 O
ATOM 11 C2' G A 541 68.474 -12.977 245.491 1.00 56.72 C
ATOM 12 O2' G A 541 67.335 -12.368 244.897 1.00 57.09 O
ATOM 13 C1' G A 541 68.549 -12.707 246.994 1.00 56.62 C
ATOM 14 N9 G A 541 69.167 -11.456 247.354 1.00 56.25 N
ATOM 15 C8 G A 541 70.331 -10.981 246.818 1.00 55.78 C
ATOM 16 N7 G A 541 70.709 -9.857 247.352 1.00 55.53 N
ATOM 17 C5 G A 541 69.728 -9.625 248.306 1.00 55.85 C
ATOM 18 C6 G A 541 69.648 -8.549 249.184 1.00 55.77 C
ATOM 19 O6 G A 541 70.504 -7.671 249.194 1.00 55.38 O
ATOM 20 N1 G A 541 68.537 -8.616 250.032 1.00 56.18 N
ATOM 21 C2 G A 541 67.627 -9.643 249.996 1.00 56.62 C
ATOM 22 N2 G A 541 66.631 -9.558 250.877 1.00 56.98 N
ATOM 23 N3 G A 541 67.677 -10.680 249.167 1.00 56.70 N
ATOM 24 C4 G A 541 68.761 -10.603 248.351 1.00 56.30 C
ATOM 25 P A A 542 66.494 -16.302 245.518 1.00 58.81 P
ATOM 26 OP1 A A 542 67.083 -17.346 246.441 1.00 58.70 O
ATOM 27 OP2 A A 542 66.664 -16.461 244.042 1.00 58.82 O
ATOM 28 O5' A A 542 64.967 -16.073 245.867 1.00 59.36 O
TER
ATOM 1 O3' A B 561 67.823 -6.486 254.583 1.00 50.50 O
ATOM 2 P U B 562 67.091 -6.684 253.147 1.00 47.73 P
ATOM 3 OP1 U B 562 66.758 -8.124 253.020 1.00 47.97 O
ATOM 4 OP2 U B 562 68.008 -6.054 252.108 1.00 47.33 O
ATOM 5 O5' U B 562 65.743 -5.861 253.283 1.00 48.19 O
ATOM 6 C5' U B 562 65.737 -4.480 253.588 1.00 48.10 C
ATOM 7 C4' U B 562 64.898 -4.221 254.805 1.00 48.44 C
ATOM 8 O4' U B 562 65.757 -4.057 255.966 1.00 48.12 O
ATOM 9 C3' U B 562 64.039 -2.968 254.793 1.00 48.70 C
ATOM 10 O3' U B 562 62.846 -3.137 254.051 1.00 49.16 O
ATOM 11 C2' U B 562 63.808 -2.742 256.285 1.00 48.82 C
ATOM 12 O2' U B 562 62.831 -3.651 256.787 1.00 49.28 O
ATOM 13 C1' U B 562 65.182 -3.143 256.860 1.00 48.32 C
ATOM 14 N1 U B 562 66.092 -2.017 256.969 1.00 47.91 N
ATOM 15 C2 U B 562 65.970 -1.159 258.017 1.00 47.96 C
ATOM 16 O2 U B 562 65.118 -1.308 258.853 1.00 48.33 O
ATOM 17 N3 U B 562 66.895 -0.138 258.030 1.00 47.56 N
ATOM 18 C4 U B 562 67.893 0.046 257.094 1.00 47.13 C
ATOM 19 O4 U B 562 68.634 0.999 257.199 1.00 46.82 O
ATOM 20 C5 U B 562 67.965 -0.902 256.034 1.00 47.11 C
ATOM 21 C6 U B 562 67.066 -1.882 256.009 1.00 47.50 C
ATOM 22 P G B 563 62.102 -1.886 253.333 1.00 48.69 P
ATOM 23 OP1 G B 563 61.007 -2.461 252.539 1.00 49.15 O
ATOM 24 OP2 G B 563 63.116 -1.081 252.646 1.00 48.23 O
ATOM 25 O5' G B 563 61.514 -1.070 254.563 1.00 48.91 O
TER
Atoms:
OP1: (73.328,-14.526,244.166)
OP2: (73.018,-12.171,245.059)
C3': (68.422,-14.485,245.495)
C1': (68.549,-12.707,246.994)
C5': (70.818,-15.004,246.143)
O6: (70.504,-7.671,249.194)
O4': (69.357,-13.728,247.526)
C8: (70.331,-10.981,246.818)
C2: (67.627,-9.643,249.996)
C6: (69.648,-8.549,249.184)
C5: (69.728,-9.625,248.306)
C4: (68.761,-10.603,248.351)
P: (72.786,-13.618,245.198)
C4': (69.408,-14.827,246.598)
C2': (68.474,-12.977,245.491)
O2': (67.335,-12.368,244.897)
N1: (68.537,-8.616,250.032)
N2: (66.631,-9.558,250.877)
N3: (67.677,-10.680,249.167)
N7: (70.709,-9.857,247.352)
N9: (69.167,-11.456,247.354)
O5': (71.250,-13.898,245.369)
O3': (67.116,-14.876,245.917)
OP2: (73.018,-12.171,245.059)
C3': (68.422,-14.485,245.495)
C1': (68.549,-12.707,246.994)
C5': (70.818,-15.004,246.143)
O6: (70.504,-7.671,249.194)
O4': (69.357,-13.728,247.526)
C8: (70.331,-10.981,246.818)
C2: (67.627,-9.643,249.996)
C6: (69.648,-8.549,249.184)
C5: (69.728,-9.625,248.306)
C4: (68.761,-10.603,248.351)
P: (72.786,-13.618,245.198)
C4': (69.408,-14.827,246.598)
C2': (68.474,-12.977,245.491)
O2': (67.335,-12.368,244.897)
N1: (68.537,-8.616,250.032)
N2: (66.631,-9.558,250.877)
N3: (67.677,-10.680,249.167)
N7: (70.709,-9.857,247.352)
N9: (69.167,-11.456,247.354)
O5': (71.250,-13.898,245.369)
O3': (67.116,-14.876,245.917)
C4: (67.893,0.046,257.094)
N3: (66.895,-0.138,258.030)
OP1: (66.758,-8.124,253.020)
OP2: (68.008,-6.054,252.108)
C2: (65.970,-1.159,258.017)
C1': (65.182,-3.143,256.860)
C3': (64.039,-2.968,254.793)
O5': (65.743,-5.861,253.283)
O4': (65.757,-4.057,255.966)
C5': (65.737,-4.480,253.588)
P: (67.091,-6.684,253.147)
C4': (64.898,-4.221,254.805)
C2': (63.808,-2.742,256.285)
O2': (62.831,-3.651,256.787)
N1: (66.092,-2.017,256.969)
O4: (68.634,0.999,257.199)
O2: (65.118,-1.308,258.853)
C6: (67.066,-1.882,256.009)
C5: (67.965,-0.902,256.034)
O3': (62.846,-3.137,254.051)
N3: (66.895,-0.138,258.030)
OP1: (66.758,-8.124,253.020)
OP2: (68.008,-6.054,252.108)
C2: (65.970,-1.159,258.017)
C1': (65.182,-3.143,256.860)
C3': (64.039,-2.968,254.793)
O5': (65.743,-5.861,253.283)
O4': (65.757,-4.057,255.966)
C5': (65.737,-4.480,253.588)
P: (67.091,-6.684,253.147)
C4': (64.898,-4.221,254.805)
C2': (63.808,-2.742,256.285)
O2': (62.831,-3.651,256.787)
N1: (66.092,-2.017,256.969)
O4: (68.634,0.999,257.199)
O2: (65.118,-1.308,258.853)
C6: (67.066,-1.882,256.009)
C5: (67.965,-0.902,256.034)
O3': (62.846,-3.137,254.051)
Image (generated by PyMOL):