ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02621:02630

Extra

PDB:
ATOM 1 O3' U A2620 39.208 109.122 168.606 1.00 47.07 O
ATOM 2 P G A2621 39.286 107.518 168.691 1.00 49.56 P
ATOM 3 OP1 G A2621 38.206 107.068 169.614 1.00 50.78 O
ATOM 4 OP2 G A2621 40.691 107.115 168.948 1.00 47.50 O
ATOM 5 O5' G A2621 38.887 107.025 167.232 1.00 48.30 O
ATOM 6 C5' G A2621 37.541 107.169 166.752 1.00 48.68 C
ATOM 7 C4' G A2621 37.377 106.443 165.442 1.00 49.54 C
ATOM 8 O4' G A2621 38.114 107.124 164.385 1.00 49.28 O
ATOM 9 C3' G A2621 37.944 105.037 165.412 1.00 49.33 C
ATOM 10 O3' G A2621 37.145 104.089 166.101 1.00 49.57 O
ATOM 11 C2' G A2621 38.092 104.801 163.914 1.00 47.88 C
ATOM 12 O2' G A2621 36.871 104.536 163.257 1.00 44.55 O
ATOM 13 C1' G A2621 38.635 106.162 163.471 1.00 48.78 C
ATOM 14 N9 G A2621 40.093 106.165 163.573 1.00 50.44 N
ATOM 15 C8 G A2621 40.847 106.522 164.667 1.00 49.80 C
ATOM 16 N7 G A2621 42.125 106.330 164.494 1.00 50.27 N
ATOM 17 C5 G A2621 42.229 105.840 163.201 1.00 51.00 C
ATOM 18 C6 G A2621 43.370 105.444 162.461 1.00 50.77 C
ATOM 19 O6 G A2621 44.556 105.446 162.815 1.00 51.15 O
ATOM 20 N1 G A2621 43.026 105.010 161.185 1.00 51.68 N
ATOM 21 C2 G A2621 41.746 104.965 160.682 1.00 52.15 C
ATOM 22 N2 G A2621 41.613 104.521 159.420 1.00 50.43 N
ATOM 23 N3 G A2621 40.673 105.330 161.364 1.00 52.15 N
ATOM 24 C4 G A2621 40.986 105.753 162.609 1.00 51.62 C
ATOM 25 P A A2622 37.802 102.707 166.582 1.00 50.72 P
ATOM 26 OP1 A A2622 37.035 102.235 167.750 1.00 52.18 O
ATOM 27 OP2 A A2622 39.275 102.841 166.680 1.00 50.55 O
ATOM 28 O5' A A2622 37.460 101.724 165.384 1.00 53.30 O
TER

ATOM 1 O3' C B2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 2 P U B2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 3 OP1 U B2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 4 OP2 U B2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 5 O5' U B2630 44.943 105.766 156.855 1.00 43.86 O
ATOM 6 C5' U B2630 44.562 104.763 155.890 1.00 42.67 C
ATOM 7 C4' U B2630 43.535 105.336 154.937 1.00 43.70 C
ATOM 8 O4' U B2630 42.347 105.683 155.692 1.00 44.61 O
ATOM 9 C3' U B2630 43.950 106.616 154.212 1.00 44.38 C
ATOM 10 O3' U B2630 43.241 106.770 152.972 1.00 44.47 O
ATOM 11 C2' U B2630 43.446 107.688 155.169 1.00 44.89 C
ATOM 12 O2' U B2630 43.256 108.933 154.534 1.00 45.75 O
ATOM 13 C1' U B2630 42.117 107.072 155.605 1.00 45.71 C
ATOM 14 N1 U B2630 41.545 107.513 156.888 1.00 47.11 N
ATOM 15 C2 U B2630 40.162 107.516 156.996 1.00 48.34 C
ATOM 16 O2 U B2630 39.421 107.190 156.084 1.00 49.99 O
ATOM 17 N3 U B2630 39.675 107.912 158.215 1.00 48.82 N
ATOM 18 C4 U B2630 40.404 108.301 159.312 1.00 48.88 C
ATOM 19 O4 U B2630 39.812 108.668 160.327 1.00 48.91 O
ATOM 20 C5 U B2630 41.826 108.277 159.126 1.00 48.80 C
ATOM 21 C6 U B2630 42.335 107.895 157.950 1.00 47.80 C
ATOM 22 P A B2631 43.148 105.545 151.923 1.00 45.46 P
ATOM 23 OP1 A B2631 44.326 104.651 152.082 1.00 43.61 O
ATOM 24 OP2 A B2631 42.849 106.137 150.597 1.00 45.82 O
ATOM 25 O5' A B2631 41.839 104.757 152.377 1.00 45.01 O
TER

Atoms:
OP1: (38.206,107.068,169.614)
OP2: (40.691,107.115,168.948)
C3': (37.944,105.037,165.412)
C1': (38.635,106.162,163.471)
C5': (37.541,107.169,166.752)
O6: (44.556,105.446,162.815)
O4': (38.114,107.124,164.385)
C8: (40.847,106.522,164.667)
C2: (41.746,104.965,160.682)
C6: (43.370,105.444,162.461)
C5: (42.229,105.840,163.201)
C4: (40.986,105.753,162.609)
P: (39.286,107.518,168.691)
C4': (37.377,106.443,165.442)
C2': (38.092,104.801,163.914)
O2': (36.871,104.536,163.257)
N1: (43.026,105.010,161.185)
N2: (41.613,104.521,159.420)
N3: (40.673,105.330,161.364)
N7: (42.125,106.330,164.494)
N9: (40.093,106.165,163.573)
O5': (38.887,107.025,167.232)
O3': (37.145,104.089,166.101)
C4: (40.404,108.301,159.312)
N3: (39.675,107.912,158.215)
OP1: (44.578,104.358,158.881)
OP2: (46.944,105.077,158.188)
C2: (40.162,107.516,156.996)
C1': (42.117,107.072,155.605)
C3': (43.950,106.616,154.212)
O5': (44.943,105.766,156.855)
O4': (42.347,105.683,155.692)
C5': (44.562,104.763,155.890)
P: (45.493,105.379,158.300)
C4': (43.535,105.336,154.937)
C2': (43.446,107.688,155.169)
O2': (43.256,108.933,154.534)
N1: (41.545,107.513,156.888)
O4: (39.812,108.668,160.327)
O2: (39.421,107.190,156.084)
C6: (42.335,107.895,157.950)
C5: (41.826,108.277,159.126)
O3': (43.241,106.770,152.972)
Image (generated by PyMOL):
PyMOL image
show in jmol