Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2597:A2566
Extra
PDB:
ATOM 1 O3' G A2596 -43.725 -53.151 -39.423 1.00 20.26 O
ATOM 2 P G A2597 -44.960 -54.167 -39.437 1.00 21.03 P
ATOM 3 OP1 G A2597 -45.441 -54.263 -40.844 1.00 65.28 O
ATOM 4 OP2 G A2597 -45.908 -53.766 -38.366 1.00 65.28 O
ATOM 5 O5' G A2597 -44.287 -55.550 -39.029 1.00 23.92 O
ATOM 6 C5' G A2597 -43.463 -56.265 -39.966 1.00 23.92 C
ATOM 7 C4' G A2597 -42.877 -57.509 -39.327 1.00 23.92 C
ATOM 8 O4' G A2597 -41.855 -57.160 -38.357 1.00 23.92 O
ATOM 9 C3' G A2597 -43.843 -58.395 -38.563 1.00 23.92 C
ATOM 10 O3' G A2597 -44.513 -59.280 -39.432 1.00 23.92 O
ATOM 11 C2' G A2597 -42.917 -59.154 -37.626 1.00 23.92 C
ATOM 12 O2' G A2597 -42.267 -60.216 -38.279 1.00 23.92 O
ATOM 13 C1' G A2597 -41.865 -58.101 -37.301 1.00 23.92 C
ATOM 14 N9 G A2597 -42.193 -57.407 -36.064 1.00 82.43 N
ATOM 15 C8 G A2597 -42.634 -56.117 -35.929 1.00 82.43 C
ATOM 16 N7 G A2597 -42.865 -55.785 -34.692 1.00 82.43 N
ATOM 17 C5 G A2597 -42.553 -56.922 -33.968 1.00 82.43 C
ATOM 18 C6 G A2597 -42.609 -57.160 -32.580 1.00 82.43 C
ATOM 19 O6 G A2597 -42.939 -56.377 -31.676 1.00 82.43 O
ATOM 20 N1 G A2597 -42.223 -58.462 -32.270 1.00 82.43 N
ATOM 21 C2 G A2597 -41.825 -59.406 -33.181 1.00 82.43 C
ATOM 22 N2 G A2597 -41.501 -60.612 -32.685 1.00 82.43 N
ATOM 23 N3 G A2597 -41.754 -59.186 -34.482 1.00 82.43 N
ATOM 24 C4 G A2597 -42.135 -57.932 -34.801 1.00 82.43 C
ATOM 25 P U A2598 -45.810 -60.072 -38.914 1.00 40.09 P
ATOM 26 OP1 U A2598 -46.958 -59.135 -38.861 1.00 87.76 O
ATOM 27 OP2 U A2598 -45.425 -60.830 -37.696 1.00 87.76 O
ATOM 28 O5' U A2598 -46.090 -61.098 -40.095 1.00 11.15 O
TER
ATOM 1 O3' U B2565 -43.666 -61.210 -28.981 1.00 9.38 O
ATOM 2 P U B2566 -42.087 -61.111 -29.182 1.00 0.79 P
ATOM 3 OP1 U B2566 -41.767 -59.805 -29.785 1.00 2.23 O
ATOM 4 OP2 U B2566 -41.675 -62.346 -29.867 1.00 2.23 O
ATOM 5 O5' U B2566 -41.568 -61.112 -27.673 1.00 32.20 O
ATOM 6 C5' U B2566 -40.214 -61.487 -27.317 1.00 32.20 C
ATOM 7 C4' U B2566 -40.127 -61.795 -25.825 1.00 32.20 C
ATOM 8 O4' U B2566 -40.617 -60.649 -25.085 1.00 32.20 O
ATOM 9 C3' U B2566 -40.987 -62.964 -25.343 1.00 32.20 C
ATOM 10 O3' U B2566 -40.360 -64.269 -25.495 1.00 32.20 O
ATOM 11 C2' U B2566 -41.421 -62.594 -23.925 1.00 32.20 C
ATOM 12 O2' U B2566 -40.736 -63.239 -22.882 1.00 32.20 O
ATOM 13 C1' U B2566 -41.171 -61.086 -23.874 1.00 32.20 C
ATOM 14 N1 U B2566 -42.305 -60.228 -23.508 1.00 13.31 N
ATOM 15 C2 U B2566 -42.075 -59.305 -22.493 1.00 13.31 C
ATOM 16 O2 U B2566 -40.988 -59.137 -21.985 1.00 13.31 O
ATOM 17 N3 U B2566 -43.157 -58.569 -22.105 1.00 13.31 N
ATOM 18 C4 U B2566 -44.410 -58.625 -22.626 1.00 13.31 C
ATOM 19 O4 U B2566 -45.274 -57.901 -22.144 1.00 13.31 O
ATOM 20 C5 U B2566 -44.581 -59.570 -23.708 1.00 13.31 C
ATOM 21 C6 U B2566 -43.542 -60.325 -24.100 1.00 13.31 C
ATOM 22 P C B2567 -38.883 -64.578 -24.880 1.00 13.02 P
ATOM 23 OP1 C B2567 -38.734 -66.053 -24.899 1.00 69.52 O
ATOM 24 OP2 C B2567 -38.595 -63.841 -23.633 1.00 69.52 O
ATOM 25 O5' C B2567 -37.895 -64.006 -25.982 1.00 18.55 O
TER
ATOM 2 P G A2597 -44.960 -54.167 -39.437 1.00 21.03 P
ATOM 3 OP1 G A2597 -45.441 -54.263 -40.844 1.00 65.28 O
ATOM 4 OP2 G A2597 -45.908 -53.766 -38.366 1.00 65.28 O
ATOM 5 O5' G A2597 -44.287 -55.550 -39.029 1.00 23.92 O
ATOM 6 C5' G A2597 -43.463 -56.265 -39.966 1.00 23.92 C
ATOM 7 C4' G A2597 -42.877 -57.509 -39.327 1.00 23.92 C
ATOM 8 O4' G A2597 -41.855 -57.160 -38.357 1.00 23.92 O
ATOM 9 C3' G A2597 -43.843 -58.395 -38.563 1.00 23.92 C
ATOM 10 O3' G A2597 -44.513 -59.280 -39.432 1.00 23.92 O
ATOM 11 C2' G A2597 -42.917 -59.154 -37.626 1.00 23.92 C
ATOM 12 O2' G A2597 -42.267 -60.216 -38.279 1.00 23.92 O
ATOM 13 C1' G A2597 -41.865 -58.101 -37.301 1.00 23.92 C
ATOM 14 N9 G A2597 -42.193 -57.407 -36.064 1.00 82.43 N
ATOM 15 C8 G A2597 -42.634 -56.117 -35.929 1.00 82.43 C
ATOM 16 N7 G A2597 -42.865 -55.785 -34.692 1.00 82.43 N
ATOM 17 C5 G A2597 -42.553 -56.922 -33.968 1.00 82.43 C
ATOM 18 C6 G A2597 -42.609 -57.160 -32.580 1.00 82.43 C
ATOM 19 O6 G A2597 -42.939 -56.377 -31.676 1.00 82.43 O
ATOM 20 N1 G A2597 -42.223 -58.462 -32.270 1.00 82.43 N
ATOM 21 C2 G A2597 -41.825 -59.406 -33.181 1.00 82.43 C
ATOM 22 N2 G A2597 -41.501 -60.612 -32.685 1.00 82.43 N
ATOM 23 N3 G A2597 -41.754 -59.186 -34.482 1.00 82.43 N
ATOM 24 C4 G A2597 -42.135 -57.932 -34.801 1.00 82.43 C
ATOM 25 P U A2598 -45.810 -60.072 -38.914 1.00 40.09 P
ATOM 26 OP1 U A2598 -46.958 -59.135 -38.861 1.00 87.76 O
ATOM 27 OP2 U A2598 -45.425 -60.830 -37.696 1.00 87.76 O
ATOM 28 O5' U A2598 -46.090 -61.098 -40.095 1.00 11.15 O
TER
ATOM 1 O3' U B2565 -43.666 -61.210 -28.981 1.00 9.38 O
ATOM 2 P U B2566 -42.087 -61.111 -29.182 1.00 0.79 P
ATOM 3 OP1 U B2566 -41.767 -59.805 -29.785 1.00 2.23 O
ATOM 4 OP2 U B2566 -41.675 -62.346 -29.867 1.00 2.23 O
ATOM 5 O5' U B2566 -41.568 -61.112 -27.673 1.00 32.20 O
ATOM 6 C5' U B2566 -40.214 -61.487 -27.317 1.00 32.20 C
ATOM 7 C4' U B2566 -40.127 -61.795 -25.825 1.00 32.20 C
ATOM 8 O4' U B2566 -40.617 -60.649 -25.085 1.00 32.20 O
ATOM 9 C3' U B2566 -40.987 -62.964 -25.343 1.00 32.20 C
ATOM 10 O3' U B2566 -40.360 -64.269 -25.495 1.00 32.20 O
ATOM 11 C2' U B2566 -41.421 -62.594 -23.925 1.00 32.20 C
ATOM 12 O2' U B2566 -40.736 -63.239 -22.882 1.00 32.20 O
ATOM 13 C1' U B2566 -41.171 -61.086 -23.874 1.00 32.20 C
ATOM 14 N1 U B2566 -42.305 -60.228 -23.508 1.00 13.31 N
ATOM 15 C2 U B2566 -42.075 -59.305 -22.493 1.00 13.31 C
ATOM 16 O2 U B2566 -40.988 -59.137 -21.985 1.00 13.31 O
ATOM 17 N3 U B2566 -43.157 -58.569 -22.105 1.00 13.31 N
ATOM 18 C4 U B2566 -44.410 -58.625 -22.626 1.00 13.31 C
ATOM 19 O4 U B2566 -45.274 -57.901 -22.144 1.00 13.31 O
ATOM 20 C5 U B2566 -44.581 -59.570 -23.708 1.00 13.31 C
ATOM 21 C6 U B2566 -43.542 -60.325 -24.100 1.00 13.31 C
ATOM 22 P C B2567 -38.883 -64.578 -24.880 1.00 13.02 P
ATOM 23 OP1 C B2567 -38.734 -66.053 -24.899 1.00 69.52 O
ATOM 24 OP2 C B2567 -38.595 -63.841 -23.633 1.00 69.52 O
ATOM 25 O5' C B2567 -37.895 -64.006 -25.982 1.00 18.55 O
TER
Atoms:
OP1: (-45.441,-54.263,-40.844)
OP2: (-45.908,-53.766,-38.366)
C3': (-43.843,-58.395,-38.563)
C1': (-41.865,-58.101,-37.301)
C5': (-43.463,-56.265,-39.966)
O6: (-42.939,-56.377,-31.676)
O4': (-41.855,-57.160,-38.357)
C8: (-42.634,-56.117,-35.929)
C2: (-41.825,-59.406,-33.181)
C6: (-42.609,-57.160,-32.580)
C5: (-42.553,-56.922,-33.968)
C4: (-42.135,-57.932,-34.801)
P: (-44.960,-54.167,-39.437)
C4': (-42.877,-57.509,-39.327)
C2': (-42.917,-59.154,-37.626)
O2': (-42.267,-60.216,-38.279)
N1: (-42.223,-58.462,-32.270)
N2: (-41.501,-60.612,-32.685)
N3: (-41.754,-59.186,-34.482)
N7: (-42.865,-55.785,-34.692)
N9: (-42.193,-57.407,-36.064)
O5': (-44.287,-55.550,-39.029)
O3': (-44.513,-59.280,-39.432)
OP2: (-45.908,-53.766,-38.366)
C3': (-43.843,-58.395,-38.563)
C1': (-41.865,-58.101,-37.301)
C5': (-43.463,-56.265,-39.966)
O6: (-42.939,-56.377,-31.676)
O4': (-41.855,-57.160,-38.357)
C8: (-42.634,-56.117,-35.929)
C2: (-41.825,-59.406,-33.181)
C6: (-42.609,-57.160,-32.580)
C5: (-42.553,-56.922,-33.968)
C4: (-42.135,-57.932,-34.801)
P: (-44.960,-54.167,-39.437)
C4': (-42.877,-57.509,-39.327)
C2': (-42.917,-59.154,-37.626)
O2': (-42.267,-60.216,-38.279)
N1: (-42.223,-58.462,-32.270)
N2: (-41.501,-60.612,-32.685)
N3: (-41.754,-59.186,-34.482)
N7: (-42.865,-55.785,-34.692)
N9: (-42.193,-57.407,-36.064)
O5': (-44.287,-55.550,-39.029)
O3': (-44.513,-59.280,-39.432)
C4: (-44.410,-58.625,-22.626)
N3: (-43.157,-58.569,-22.105)
OP1: (-41.767,-59.805,-29.785)
OP2: (-41.675,-62.346,-29.867)
C2: (-42.075,-59.305,-22.493)
C1': (-41.171,-61.086,-23.874)
C3': (-40.987,-62.964,-25.343)
O5': (-41.568,-61.112,-27.673)
O4': (-40.617,-60.649,-25.085)
C5': (-40.214,-61.487,-27.317)
P: (-42.087,-61.111,-29.182)
C4': (-40.127,-61.795,-25.825)
C2': (-41.421,-62.594,-23.925)
O2': (-40.736,-63.239,-22.882)
N1: (-42.305,-60.228,-23.508)
O4: (-45.274,-57.901,-22.144)
O2: (-40.988,-59.137,-21.985)
C6: (-43.542,-60.325,-24.100)
C5: (-44.581,-59.570,-23.708)
O3': (-40.360,-64.269,-25.495)
N3: (-43.157,-58.569,-22.105)
OP1: (-41.767,-59.805,-29.785)
OP2: (-41.675,-62.346,-29.867)
C2: (-42.075,-59.305,-22.493)
C1': (-41.171,-61.086,-23.874)
C3': (-40.987,-62.964,-25.343)
O5': (-41.568,-61.112,-27.673)
O4': (-40.617,-60.649,-25.085)
C5': (-40.214,-61.487,-27.317)
P: (-42.087,-61.111,-29.182)
C4': (-40.127,-61.795,-25.825)
C2': (-41.421,-62.594,-23.925)
O2': (-40.736,-63.239,-22.882)
N1: (-42.305,-60.228,-23.508)
O4: (-45.274,-57.901,-22.144)
O2: (-40.988,-59.137,-21.985)
C6: (-43.542,-60.325,-24.100)
C5: (-44.581,-59.570,-23.708)
O3': (-40.360,-64.269,-25.495)
Image (generated by PyMOL):