Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A515:A490
Extra
PDB:
ATOM 1 O3' A A 514 44.830-116.154 -36.362 1.00 52.19 O
ATOM 2 P A A 515 44.407-115.477 -34.967 1.00 54.89 P
ATOM 3 OP1 A A 515 44.694-116.410 -33.841 1.00 57.25 O
ATOM 4 OP2 A A 515 43.012-114.991 -35.167 1.00 51.22 O
ATOM 5 O5' A A 515 45.417-114.237 -34.806 1.00 55.78 O
ATOM 6 C5' A A 515 46.655-114.354 -34.073 1.00 51.84 C
ATOM 7 C4' A A 515 47.362-113.011 -33.993 1.00 50.92 C
ATOM 8 O4' A A 515 47.566-112.522 -35.335 1.00 53.68 O
ATOM 9 C3' A A 515 46.621-111.894 -33.267 1.00 49.13 C
ATOM 10 O3' A A 515 47.052-111.868 -31.923 1.00 41.16 O
ATOM 11 C2' A A 515 47.124-110.620 -33.950 1.00 51.49 C
ATOM 12 O2' A A 515 48.281-110.040 -33.377 1.00 41.67 O
ATOM 13 C1' A A 515 47.422-111.113 -35.365 1.00 53.80 C
ATOM 14 N9 A A 515 46.359-110.787 -36.308 1.00 56.59 N
ATOM 15 C8 A A 515 45.210-111.494 -36.556 1.00 58.55 C
ATOM 16 N7 A A 515 44.450-110.958 -37.474 1.00 57.62 N
ATOM 17 C5 A A 515 45.141-109.824 -37.855 1.00 58.61 C
ATOM 18 C6 A A 515 44.863-108.831 -38.792 1.00 58.00 C
ATOM 19 N6 A A 515 43.775-108.833 -39.568 1.00 64.41 N
ATOM 20 N1 A A 515 45.748-107.825 -38.920 1.00 56.59 N
ATOM 21 C2 A A 515 46.839-107.836 -38.153 1.00 54.60 C
ATOM 22 N3 A A 515 47.218-108.719 -37.241 1.00 53.56 N
ATOM 23 C4 A A 515 46.315-109.701 -37.140 1.00 56.80 C
ATOM 24 P A A 516 46.112-112.427 -30.759 1.00 49.47 P
ATOM 25 OP1 A A 516 47.028-113.128 -29.817 1.00 43.00 O
ATOM 26 OP2 A A 516 44.962-113.172 -31.354 1.00 51.12 O
ATOM 27 O5' A A 516 45.640-111.074 -30.066 1.00 46.33 O
TER
ATOM 1 O3' U B 489 47.112-101.302 -37.876 1.00 42.97 O
ATOM 2 P G B 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 3 OP1 G B 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 4 OP2 G B 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 5 O5' G B 490 46.764-102.925 -39.791 1.00 54.35 O
ATOM 6 C5' G B 490 46.689-104.249 -39.271 1.00 57.38 C
ATOM 7 C4' G B 490 45.546-104.995 -39.906 1.00 56.17 C
ATOM 8 O4' G B 490 44.297-104.354 -39.538 1.00 53.01 O
ATOM 9 C3' G B 490 45.514-105.031 -41.428 1.00 56.91 C
ATOM 10 O3' G B 490 46.355-106.040 -41.986 1.00 52.69 O
ATOM 11 C2' G B 490 44.040-105.282 -41.720 1.00 59.82 C
ATOM 12 O2' G B 490 43.719-106.656 -41.670 1.00 66.78 O
ATOM 13 C1' G B 490 43.359-104.512 -40.585 1.00 55.35 C
ATOM 14 N9 G B 490 42.980-103.191 -41.051 1.00 58.14 N
ATOM 15 C8 G B 490 43.788-102.085 -41.159 1.00 61.60 C
ATOM 16 N7 G B 490 43.180-101.058 -41.685 1.00 62.29 N
ATOM 17 C5 G B 490 41.891-101.511 -41.921 1.00 64.50 C
ATOM 18 C6 G B 490 40.778-100.851 -42.497 1.00 69.58 C
ATOM 19 O6 G B 490 40.711 -99.688 -42.941 1.00 68.73 O
ATOM 20 N1 G B 490 39.656-101.685 -42.540 1.00 69.50 N
ATOM 21 C2 G B 490 39.616-102.986 -42.089 1.00 67.07 C
ATOM 22 N2 G B 490 38.437-103.611 -42.193 1.00 65.72 N
ATOM 23 N3 G B 490 40.657-103.617 -41.569 1.00 68.14 N
ATOM 24 C4 G B 490 41.751-102.824 -41.514 1.00 65.15 C
ATOM 25 P A B 491 46.883-105.872 -43.491 1.00 64.08 P
ATOM 26 OP1 A B 491 47.498-107.148 -43.908 1.00 51.29 O
ATOM 27 OP2 A B 491 47.681-104.627 -43.534 1.00 65.04 O
ATOM 28 O5' A B 491 45.560-105.633 -44.350 1.00 57.41 O
TER
ATOM 2 P A A 515 44.407-115.477 -34.967 1.00 54.89 P
ATOM 3 OP1 A A 515 44.694-116.410 -33.841 1.00 57.25 O
ATOM 4 OP2 A A 515 43.012-114.991 -35.167 1.00 51.22 O
ATOM 5 O5' A A 515 45.417-114.237 -34.806 1.00 55.78 O
ATOM 6 C5' A A 515 46.655-114.354 -34.073 1.00 51.84 C
ATOM 7 C4' A A 515 47.362-113.011 -33.993 1.00 50.92 C
ATOM 8 O4' A A 515 47.566-112.522 -35.335 1.00 53.68 O
ATOM 9 C3' A A 515 46.621-111.894 -33.267 1.00 49.13 C
ATOM 10 O3' A A 515 47.052-111.868 -31.923 1.00 41.16 O
ATOM 11 C2' A A 515 47.124-110.620 -33.950 1.00 51.49 C
ATOM 12 O2' A A 515 48.281-110.040 -33.377 1.00 41.67 O
ATOM 13 C1' A A 515 47.422-111.113 -35.365 1.00 53.80 C
ATOM 14 N9 A A 515 46.359-110.787 -36.308 1.00 56.59 N
ATOM 15 C8 A A 515 45.210-111.494 -36.556 1.00 58.55 C
ATOM 16 N7 A A 515 44.450-110.958 -37.474 1.00 57.62 N
ATOM 17 C5 A A 515 45.141-109.824 -37.855 1.00 58.61 C
ATOM 18 C6 A A 515 44.863-108.831 -38.792 1.00 58.00 C
ATOM 19 N6 A A 515 43.775-108.833 -39.568 1.00 64.41 N
ATOM 20 N1 A A 515 45.748-107.825 -38.920 1.00 56.59 N
ATOM 21 C2 A A 515 46.839-107.836 -38.153 1.00 54.60 C
ATOM 22 N3 A A 515 47.218-108.719 -37.241 1.00 53.56 N
ATOM 23 C4 A A 515 46.315-109.701 -37.140 1.00 56.80 C
ATOM 24 P A A 516 46.112-112.427 -30.759 1.00 49.47 P
ATOM 25 OP1 A A 516 47.028-113.128 -29.817 1.00 43.00 O
ATOM 26 OP2 A A 516 44.962-113.172 -31.354 1.00 51.12 O
ATOM 27 O5' A A 516 45.640-111.074 -30.066 1.00 46.33 O
TER
ATOM 1 O3' U B 489 47.112-101.302 -37.876 1.00 42.97 O
ATOM 2 P G B 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 3 OP1 G B 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 4 OP2 G B 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 5 O5' G B 490 46.764-102.925 -39.791 1.00 54.35 O
ATOM 6 C5' G B 490 46.689-104.249 -39.271 1.00 57.38 C
ATOM 7 C4' G B 490 45.546-104.995 -39.906 1.00 56.17 C
ATOM 8 O4' G B 490 44.297-104.354 -39.538 1.00 53.01 O
ATOM 9 C3' G B 490 45.514-105.031 -41.428 1.00 56.91 C
ATOM 10 O3' G B 490 46.355-106.040 -41.986 1.00 52.69 O
ATOM 11 C2' G B 490 44.040-105.282 -41.720 1.00 59.82 C
ATOM 12 O2' G B 490 43.719-106.656 -41.670 1.00 66.78 O
ATOM 13 C1' G B 490 43.359-104.512 -40.585 1.00 55.35 C
ATOM 14 N9 G B 490 42.980-103.191 -41.051 1.00 58.14 N
ATOM 15 C8 G B 490 43.788-102.085 -41.159 1.00 61.60 C
ATOM 16 N7 G B 490 43.180-101.058 -41.685 1.00 62.29 N
ATOM 17 C5 G B 490 41.891-101.511 -41.921 1.00 64.50 C
ATOM 18 C6 G B 490 40.778-100.851 -42.497 1.00 69.58 C
ATOM 19 O6 G B 490 40.711 -99.688 -42.941 1.00 68.73 O
ATOM 20 N1 G B 490 39.656-101.685 -42.540 1.00 69.50 N
ATOM 21 C2 G B 490 39.616-102.986 -42.089 1.00 67.07 C
ATOM 22 N2 G B 490 38.437-103.611 -42.193 1.00 65.72 N
ATOM 23 N3 G B 490 40.657-103.617 -41.569 1.00 68.14 N
ATOM 24 C4 G B 490 41.751-102.824 -41.514 1.00 65.15 C
ATOM 25 P A B 491 46.883-105.872 -43.491 1.00 64.08 P
ATOM 26 OP1 A B 491 47.498-107.148 -43.908 1.00 51.29 O
ATOM 27 OP2 A B 491 47.681-104.627 -43.534 1.00 65.04 O
ATOM 28 O5' A B 491 45.560-105.633 -44.350 1.00 57.41 O
TER
Atoms:
OP1: (44.694,-116.410,-33.841)
OP2: (43.012,-114.991,-35.167)
C3': (46.621,-111.894,-33.267)
C1': (47.422,-111.113,-35.365)
C5': (46.655,-114.354,-34.073)
O4': (47.566,-112.522,-35.335)
C8: (45.210,-111.494,-36.556)
O2': (48.281,-110.040,-33.377)
C6: (44.863,-108.831,-38.792)
C5: (45.141,-109.824,-37.855)
C4: (46.315,-109.701,-37.140)
P: (44.407,-115.477,-34.967)
C4': (47.362,-113.011,-33.993)
C2': (47.124,-110.620,-33.950)
C2: (46.839,-107.836,-38.153)
N1: (45.748,-107.825,-38.920)
N3: (47.218,-108.719,-37.241)
N6: (43.775,-108.833,-39.568)
N7: (44.450,-110.958,-37.474)
N9: (46.359,-110.787,-36.308)
O5': (45.417,-114.237,-34.806)
O3': (47.052,-111.868,-31.923)
OP2: (43.012,-114.991,-35.167)
C3': (46.621,-111.894,-33.267)
C1': (47.422,-111.113,-35.365)
C5': (46.655,-114.354,-34.073)
O4': (47.566,-112.522,-35.335)
C8: (45.210,-111.494,-36.556)
O2': (48.281,-110.040,-33.377)
C6: (44.863,-108.831,-38.792)
C5: (45.141,-109.824,-37.855)
C4: (46.315,-109.701,-37.140)
P: (44.407,-115.477,-34.967)
C4': (47.362,-113.011,-33.993)
C2': (47.124,-110.620,-33.950)
C2: (46.839,-107.836,-38.153)
N1: (45.748,-107.825,-38.920)
N3: (47.218,-108.719,-37.241)
N6: (43.775,-108.833,-39.568)
N7: (44.450,-110.958,-37.474)
N9: (46.359,-110.787,-36.308)
O5': (45.417,-114.237,-34.806)
O3': (47.052,-111.868,-31.923)
OP1: (49.031,-102.681,-38.820)
OP2: (47.964,-100.748,-40.166)
C3': (45.514,-105.031,-41.428)
C1': (43.359,-104.512,-40.585)
C5': (46.689,-104.249,-39.271)
O6: (40.711,-99.688,-42.941)
O4': (44.297,-104.354,-39.538)
C8: (43.788,-102.085,-41.159)
C2: (39.616,-102.986,-42.089)
C6: (40.778,-100.851,-42.497)
C5: (41.891,-101.511,-41.921)
C4: (41.751,-102.824,-41.514)
P: (47.818,-101.883,-39.209)
C4': (45.546,-104.995,-39.906)
C2': (44.040,-105.282,-41.720)
O2': (43.719,-106.656,-41.670)
N1: (39.656,-101.685,-42.540)
N2: (38.437,-103.611,-42.193)
N3: (40.657,-103.617,-41.569)
N7: (43.180,-101.058,-41.685)
N9: (42.980,-103.191,-41.051)
O5': (46.764,-102.925,-39.791)
O3': (46.355,-106.040,-41.986)
OP2: (47.964,-100.748,-40.166)
C3': (45.514,-105.031,-41.428)
C1': (43.359,-104.512,-40.585)
C5': (46.689,-104.249,-39.271)
O6: (40.711,-99.688,-42.941)
O4': (44.297,-104.354,-39.538)
C8: (43.788,-102.085,-41.159)
C2: (39.616,-102.986,-42.089)
C6: (40.778,-100.851,-42.497)
C5: (41.891,-101.511,-41.921)
C4: (41.751,-102.824,-41.514)
P: (47.818,-101.883,-39.209)
C4': (45.546,-104.995,-39.906)
C2': (44.040,-105.282,-41.720)
O2': (43.719,-106.656,-41.670)
N1: (39.656,-101.685,-42.540)
N2: (38.437,-103.611,-42.193)
N3: (40.657,-103.617,-41.569)
N7: (43.180,-101.058,-41.685)
N9: (42.980,-103.191,-41.051)
O5': (46.764,-102.925,-39.791)
O3': (46.355,-106.040,-41.986)
Image (generated by PyMOL):