Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0898:01252
Extra
PDB:
ATOM 1 O3' C A 897 29.965 89.315 80.674 1.00 29.73 O
ATOM 2 P G A 898 30.344 89.589 82.212 1.00 29.83 P
ATOM 3 OP1 G A 898 30.428 88.285 82.931 1.00 26.01 O
ATOM 4 OP2 G A 898 29.429 90.658 82.703 1.00 26.34 O
ATOM 5 O5' G A 898 31.801 90.227 82.163 1.00 30.52 O
ATOM 6 C5' G A 898 32.902 89.558 81.525 1.00 28.21 C
ATOM 7 C4' G A 898 34.061 90.522 81.370 1.00 30.72 C
ATOM 8 O4' G A 898 33.667 91.611 80.486 1.00 31.41 O
ATOM 9 C3' G A 898 34.506 91.236 82.641 1.00 28.48 C
ATOM 10 O3' G A 898 35.370 90.430 83.442 1.00 25.94 O
ATOM 11 C2' G A 898 35.185 92.477 82.081 1.00 27.92 C
ATOM 12 O2' G A 898 36.442 92.196 81.501 1.00 31.89 O
ATOM 13 C1' G A 898 34.239 92.830 80.941 1.00 29.21 C
ATOM 14 N9 G A 898 33.160 93.713 81.372 1.00 28.39 N
ATOM 15 C8 G A 898 31.852 93.367 81.603 1.00 27.81 C
ATOM 16 N7 G A 898 31.115 94.376 81.980 1.00 28.85 N
ATOM 17 C5 G A 898 31.987 95.452 81.998 1.00 28.41 C
ATOM 18 C6 G A 898 31.755 96.803 82.315 1.00 28.48 C
ATOM 19 O6 G A 898 30.700 97.339 82.650 1.00 30.56 O
ATOM 20 N1 G A 898 32.914 97.563 82.206 1.00 26.89 N
ATOM 21 C2 G A 898 34.140 97.080 81.833 1.00 26.76 C
ATOM 22 N2 G A 898 35.138 97.977 81.782 1.00 25.86 N
ATOM 23 N3 G A 898 34.370 95.813 81.529 1.00 27.50 N
ATOM 24 C4 G A 898 33.255 95.061 81.630 1.00 28.56 C
ATOM 25 P A A 899 35.639 90.833 84.975 1.00 28.50 P
ATOM 26 OP1 A A 899 36.120 89.614 85.668 1.00 23.83 O
ATOM 27 OP2 A A 899 34.468 91.575 85.515 1.00 24.85 O
ATOM 28 O5' A A 899 36.839 91.881 84.883 1.00 29.10 O
TER
ATOM 1 O3' G B1251 32.319 101.578 84.423 1.00 29.08 O
ATOM 2 P U B1252 33.323 101.550 83.158 1.00 29.41 P
ATOM 3 OP1 U B1252 32.995 102.767 82.367 1.00 26.89 O
ATOM 4 OP2 U B1252 33.304 100.221 82.499 1.00 27.24 O
ATOM 5 O5' U B1252 34.768 101.734 83.808 1.00 28.25 O
ATOM 6 C5' U B1252 35.252 103.031 84.224 1.00 26.88 C
ATOM 7 C4' U B1252 36.757 102.999 84.348 1.00 27.98 C
ATOM 8 O4' U B1252 37.126 102.024 85.353 1.00 28.73 O
ATOM 9 C3' U B1252 37.484 102.552 83.090 1.00 28.33 C
ATOM 10 O3' U B1252 37.747 103.674 82.262 1.00 29.01 O
ATOM 11 C2' U B1252 38.773 101.949 83.630 1.00 28.74 C
ATOM 12 O2' U B1252 39.765 102.919 83.897 1.00 29.54 O
ATOM 13 C1' U B1252 38.295 101.336 84.949 1.00 27.74 C
ATOM 14 N1 U B1252 37.996 99.898 84.908 1.00 26.26 N
ATOM 15 C2 U B1252 39.045 99.028 84.670 1.00 26.88 C
ATOM 16 O2 U B1252 40.172 99.408 84.418 1.00 27.48 O
ATOM 17 N3 U B1252 38.718 97.694 84.729 1.00 26.17 N
ATOM 18 C4 U B1252 37.471 97.158 84.978 1.00 26.20 C
ATOM 19 O4 U B1252 37.346 95.943 85.077 1.00 26.06 O
ATOM 20 C5 U B1252 36.432 98.122 85.166 1.00 25.69 C
ATOM 21 C6 U B1252 36.721 99.424 85.124 1.00 25.38 C
ATOM 22 P A B1253 37.711 103.521 80.671 1.00 30.34 P
ATOM 23 OP1 A B1253 38.083 104.851 80.153 1.00 30.69 O
ATOM 24 OP2 A B1253 36.400 102.912 80.292 1.00 31.72 O
ATOM 25 O5' A B1253 38.894 102.507 80.337 1.00 27.08 O
TER
ATOM 2 P G A 898 30.344 89.589 82.212 1.00 29.83 P
ATOM 3 OP1 G A 898 30.428 88.285 82.931 1.00 26.01 O
ATOM 4 OP2 G A 898 29.429 90.658 82.703 1.00 26.34 O
ATOM 5 O5' G A 898 31.801 90.227 82.163 1.00 30.52 O
ATOM 6 C5' G A 898 32.902 89.558 81.525 1.00 28.21 C
ATOM 7 C4' G A 898 34.061 90.522 81.370 1.00 30.72 C
ATOM 8 O4' G A 898 33.667 91.611 80.486 1.00 31.41 O
ATOM 9 C3' G A 898 34.506 91.236 82.641 1.00 28.48 C
ATOM 10 O3' G A 898 35.370 90.430 83.442 1.00 25.94 O
ATOM 11 C2' G A 898 35.185 92.477 82.081 1.00 27.92 C
ATOM 12 O2' G A 898 36.442 92.196 81.501 1.00 31.89 O
ATOM 13 C1' G A 898 34.239 92.830 80.941 1.00 29.21 C
ATOM 14 N9 G A 898 33.160 93.713 81.372 1.00 28.39 N
ATOM 15 C8 G A 898 31.852 93.367 81.603 1.00 27.81 C
ATOM 16 N7 G A 898 31.115 94.376 81.980 1.00 28.85 N
ATOM 17 C5 G A 898 31.987 95.452 81.998 1.00 28.41 C
ATOM 18 C6 G A 898 31.755 96.803 82.315 1.00 28.48 C
ATOM 19 O6 G A 898 30.700 97.339 82.650 1.00 30.56 O
ATOM 20 N1 G A 898 32.914 97.563 82.206 1.00 26.89 N
ATOM 21 C2 G A 898 34.140 97.080 81.833 1.00 26.76 C
ATOM 22 N2 G A 898 35.138 97.977 81.782 1.00 25.86 N
ATOM 23 N3 G A 898 34.370 95.813 81.529 1.00 27.50 N
ATOM 24 C4 G A 898 33.255 95.061 81.630 1.00 28.56 C
ATOM 25 P A A 899 35.639 90.833 84.975 1.00 28.50 P
ATOM 26 OP1 A A 899 36.120 89.614 85.668 1.00 23.83 O
ATOM 27 OP2 A A 899 34.468 91.575 85.515 1.00 24.85 O
ATOM 28 O5' A A 899 36.839 91.881 84.883 1.00 29.10 O
TER
ATOM 1 O3' G B1251 32.319 101.578 84.423 1.00 29.08 O
ATOM 2 P U B1252 33.323 101.550 83.158 1.00 29.41 P
ATOM 3 OP1 U B1252 32.995 102.767 82.367 1.00 26.89 O
ATOM 4 OP2 U B1252 33.304 100.221 82.499 1.00 27.24 O
ATOM 5 O5' U B1252 34.768 101.734 83.808 1.00 28.25 O
ATOM 6 C5' U B1252 35.252 103.031 84.224 1.00 26.88 C
ATOM 7 C4' U B1252 36.757 102.999 84.348 1.00 27.98 C
ATOM 8 O4' U B1252 37.126 102.024 85.353 1.00 28.73 O
ATOM 9 C3' U B1252 37.484 102.552 83.090 1.00 28.33 C
ATOM 10 O3' U B1252 37.747 103.674 82.262 1.00 29.01 O
ATOM 11 C2' U B1252 38.773 101.949 83.630 1.00 28.74 C
ATOM 12 O2' U B1252 39.765 102.919 83.897 1.00 29.54 O
ATOM 13 C1' U B1252 38.295 101.336 84.949 1.00 27.74 C
ATOM 14 N1 U B1252 37.996 99.898 84.908 1.00 26.26 N
ATOM 15 C2 U B1252 39.045 99.028 84.670 1.00 26.88 C
ATOM 16 O2 U B1252 40.172 99.408 84.418 1.00 27.48 O
ATOM 17 N3 U B1252 38.718 97.694 84.729 1.00 26.17 N
ATOM 18 C4 U B1252 37.471 97.158 84.978 1.00 26.20 C
ATOM 19 O4 U B1252 37.346 95.943 85.077 1.00 26.06 O
ATOM 20 C5 U B1252 36.432 98.122 85.166 1.00 25.69 C
ATOM 21 C6 U B1252 36.721 99.424 85.124 1.00 25.38 C
ATOM 22 P A B1253 37.711 103.521 80.671 1.00 30.34 P
ATOM 23 OP1 A B1253 38.083 104.851 80.153 1.00 30.69 O
ATOM 24 OP2 A B1253 36.400 102.912 80.292 1.00 31.72 O
ATOM 25 O5' A B1253 38.894 102.507 80.337 1.00 27.08 O
TER
Atoms:
OP1: (30.428,88.285,82.931)
OP2: (29.429,90.658,82.703)
C3': (34.506,91.236,82.641)
C1': (34.239,92.830,80.941)
C5': (32.902,89.558,81.525)
O6: (30.700,97.339,82.650)
O4': (33.667,91.611,80.486)
C8: (31.852,93.367,81.603)
C2: (34.140,97.080,81.833)
C6: (31.755,96.803,82.315)
C5: (31.987,95.452,81.998)
C4: (33.255,95.061,81.630)
P: (30.344,89.589,82.212)
C4': (34.061,90.522,81.370)
C2': (35.185,92.477,82.081)
O2': (36.442,92.196,81.501)
N1: (32.914,97.563,82.206)
N2: (35.138,97.977,81.782)
N3: (34.370,95.813,81.529)
N7: (31.115,94.376,81.980)
N9: (33.160,93.713,81.372)
O5': (31.801,90.227,82.163)
O3': (35.370,90.430,83.442)
OP2: (29.429,90.658,82.703)
C3': (34.506,91.236,82.641)
C1': (34.239,92.830,80.941)
C5': (32.902,89.558,81.525)
O6: (30.700,97.339,82.650)
O4': (33.667,91.611,80.486)
C8: (31.852,93.367,81.603)
C2: (34.140,97.080,81.833)
C6: (31.755,96.803,82.315)
C5: (31.987,95.452,81.998)
C4: (33.255,95.061,81.630)
P: (30.344,89.589,82.212)
C4': (34.061,90.522,81.370)
C2': (35.185,92.477,82.081)
O2': (36.442,92.196,81.501)
N1: (32.914,97.563,82.206)
N2: (35.138,97.977,81.782)
N3: (34.370,95.813,81.529)
N7: (31.115,94.376,81.980)
N9: (33.160,93.713,81.372)
O5': (31.801,90.227,82.163)
O3': (35.370,90.430,83.442)
C4: (37.471,97.158,84.978)
N3: (38.718,97.694,84.729)
OP1: (32.995,102.767,82.367)
OP2: (33.304,100.221,82.499)
C2: (39.045,99.028,84.670)
C1': (38.295,101.336,84.949)
C3': (37.484,102.552,83.090)
O5': (34.768,101.734,83.808)
O4': (37.126,102.024,85.353)
C5': (35.252,103.031,84.224)
P: (33.323,101.550,83.158)
C4': (36.757,102.999,84.348)
C2': (38.773,101.949,83.630)
O2': (39.765,102.919,83.897)
N1: (37.996,99.898,84.908)
O4: (37.346,95.943,85.077)
O2: (40.172,99.408,84.418)
C6: (36.721,99.424,85.124)
C5: (36.432,98.122,85.166)
O3': (37.747,103.674,82.262)
N3: (38.718,97.694,84.729)
OP1: (32.995,102.767,82.367)
OP2: (33.304,100.221,82.499)
C2: (39.045,99.028,84.670)
C1': (38.295,101.336,84.949)
C3': (37.484,102.552,83.090)
O5': (34.768,101.734,83.808)
O4': (37.126,102.024,85.353)
C5': (35.252,103.031,84.224)
P: (33.323,101.550,83.158)
C4': (36.757,102.999,84.348)
C2': (38.773,101.949,83.630)
O2': (39.765,102.919,83.897)
N1: (37.996,99.898,84.908)
O4: (37.346,95.943,85.077)
O2: (40.172,99.408,84.418)
C6: (36.721,99.424,85.124)
C5: (36.432,98.122,85.166)
O3': (37.747,103.674,82.262)
Image (generated by PyMOL):