Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12593:12598
Extra
PDB:
ATOM 1 O3' C A2592 -9.407 1.026 17.941 1.00 62.10 O
ATOM 2 P G A2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 3 OP1 G A2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 4 OP2 G A2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 5 O5' G A2593 -10.029 2.967 16.482 1.00 59.78 O
ATOM 6 C5' G A2593 -9.886 3.963 17.474 1.00 59.48 C
ATOM 7 C4' G A2593 -8.956 5.058 17.008 1.00 59.47 C
ATOM 8 O4' G A2593 -7.615 4.539 16.854 1.00 59.11 O
ATOM 9 C3' G A2593 -9.240 5.659 15.643 1.00 60.07 C
ATOM 10 O3' G A2593 -10.347 6.555 15.639 1.00 60.47 O
ATOM 11 C2' G A2593 -7.921 6.327 15.353 1.00 59.87 C
ATOM 12 O2' G A2593 -7.765 7.447 16.194 1.00 59.65 O
ATOM 13 C1' G A2593 -6.960 5.249 15.828 1.00 59.35 C
ATOM 14 N9 G A2593 -6.631 4.312 14.749 1.00 59.56 N
ATOM 15 C8 G A2593 -7.214 3.109 14.459 1.00 59.72 C
ATOM 16 N7 G A2593 -6.684 2.543 13.400 1.00 59.92 N
ATOM 17 C5 G A2593 -5.695 3.420 12.981 1.00 59.87 C
ATOM 18 C6 G A2593 -4.777 3.348 11.896 1.00 60.02 C
ATOM 19 O6 G A2593 -4.684 2.446 11.080 1.00 60.24 O
ATOM 20 N1 G A2593 -3.931 4.455 11.819 1.00 59.92 N
ATOM 21 C2 G A2593 -3.999 5.494 12.718 1.00 59.69 C
ATOM 22 N2 G A2593 -3.166 6.502 12.527 1.00 59.64 N
ATOM 23 N3 G A2593 -4.834 5.582 13.743 1.00 59.55 N
ATOM 24 C4 G A2593 -5.654 4.518 13.813 1.00 59.65 C
ATOM 25 P U A2594 -10.942 7.119 14.262 1.00 90.74 P
ATOM 26 OP1 U A2594 -10.313 6.374 13.154 1.00 90.89 O
ATOM 27 OP2 U A2594 -10.799 8.587 14.299 1.00 90.84 O
ATOM 28 O5' U A2594 -12.465 6.716 14.379 1.00 91.10 O
TER
ATOM 1 O3' A B2597 -1.262 3.138 10.421 1.00 64.93 O
ATOM 2 P U B2598 -0.784 4.518 9.748 1.00 62.82 P
ATOM 3 OP1 U B2598 -1.883 5.474 9.946 1.00 63.09 O
ATOM 4 OP2 U B2598 -0.333 4.217 8.355 1.00 63.22 O
ATOM 5 O5' U B2598 0.458 4.956 10.647 1.00 62.21 O
ATOM 6 C5' U B2598 0.430 4.814 12.065 1.00 61.68 C
ATOM 7 C4' U B2598 1.809 4.924 12.674 1.00 61.15 C
ATOM 8 O4' U B2598 2.547 3.677 12.530 1.00 60.94 O
ATOM 9 C3' U B2598 2.743 5.936 12.046 1.00 61.25 C
ATOM 10 O3' U B2598 2.421 7.258 12.386 1.00 61.32 O
ATOM 11 C2' U B2598 4.088 5.479 12.588 1.00 60.71 C
ATOM 12 O2' U B2598 4.181 5.772 13.991 1.00 60.22 O
ATOM 13 C1' U B2598 3.943 3.968 12.431 1.00 60.68 C
ATOM 14 N1 U B2598 4.490 3.466 11.115 1.00 61.00 N
ATOM 15 C2 U B2598 3.602 3.110 10.127 1.00 61.54 C
ATOM 16 O2 U B2598 2.426 3.181 10.214 1.00 61.78 O
ATOM 17 N3 U B2598 4.031 2.646 8.940 1.00 61.86 N
ATOM 18 C4 U B2598 5.295 2.468 8.568 1.00 61.72 C
ATOM 19 O4 U B2598 5.393 2.021 7.412 1.00 62.12 O
ATOM 20 C5 U B2598 6.242 2.833 9.620 1.00 61.14 C
ATOM 21 C6 U B2598 5.829 3.301 10.827 1.00 60.81 C
ATOM 22 P A B2599 2.779 8.440 11.384 1.00 58.03 P
ATOM 23 OP1 A B2599 2.162 8.139 10.097 1.00 58.62 O
ATOM 24 OP2 A B2599 4.246 8.624 11.432 1.00 57.70 O
ATOM 25 O5' A B2599 2.048 9.659 12.062 1.00 58.08 O
TER
ATOM 2 P G A2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 3 OP1 G A2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 4 OP2 G A2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 5 O5' G A2593 -10.029 2.967 16.482 1.00 59.78 O
ATOM 6 C5' G A2593 -9.886 3.963 17.474 1.00 59.48 C
ATOM 7 C4' G A2593 -8.956 5.058 17.008 1.00 59.47 C
ATOM 8 O4' G A2593 -7.615 4.539 16.854 1.00 59.11 O
ATOM 9 C3' G A2593 -9.240 5.659 15.643 1.00 60.07 C
ATOM 10 O3' G A2593 -10.347 6.555 15.639 1.00 60.47 O
ATOM 11 C2' G A2593 -7.921 6.327 15.353 1.00 59.87 C
ATOM 12 O2' G A2593 -7.765 7.447 16.194 1.00 59.65 O
ATOM 13 C1' G A2593 -6.960 5.249 15.828 1.00 59.35 C
ATOM 14 N9 G A2593 -6.631 4.312 14.749 1.00 59.56 N
ATOM 15 C8 G A2593 -7.214 3.109 14.459 1.00 59.72 C
ATOM 16 N7 G A2593 -6.684 2.543 13.400 1.00 59.92 N
ATOM 17 C5 G A2593 -5.695 3.420 12.981 1.00 59.87 C
ATOM 18 C6 G A2593 -4.777 3.348 11.896 1.00 60.02 C
ATOM 19 O6 G A2593 -4.684 2.446 11.080 1.00 60.24 O
ATOM 20 N1 G A2593 -3.931 4.455 11.819 1.00 59.92 N
ATOM 21 C2 G A2593 -3.999 5.494 12.718 1.00 59.69 C
ATOM 22 N2 G A2593 -3.166 6.502 12.527 1.00 59.64 N
ATOM 23 N3 G A2593 -4.834 5.582 13.743 1.00 59.55 N
ATOM 24 C4 G A2593 -5.654 4.518 13.813 1.00 59.65 C
ATOM 25 P U A2594 -10.942 7.119 14.262 1.00 90.74 P
ATOM 26 OP1 U A2594 -10.313 6.374 13.154 1.00 90.89 O
ATOM 27 OP2 U A2594 -10.799 8.587 14.299 1.00 90.84 O
ATOM 28 O5' U A2594 -12.465 6.716 14.379 1.00 91.10 O
TER
ATOM 1 O3' A B2597 -1.262 3.138 10.421 1.00 64.93 O
ATOM 2 P U B2598 -0.784 4.518 9.748 1.00 62.82 P
ATOM 3 OP1 U B2598 -1.883 5.474 9.946 1.00 63.09 O
ATOM 4 OP2 U B2598 -0.333 4.217 8.355 1.00 63.22 O
ATOM 5 O5' U B2598 0.458 4.956 10.647 1.00 62.21 O
ATOM 6 C5' U B2598 0.430 4.814 12.065 1.00 61.68 C
ATOM 7 C4' U B2598 1.809 4.924 12.674 1.00 61.15 C
ATOM 8 O4' U B2598 2.547 3.677 12.530 1.00 60.94 O
ATOM 9 C3' U B2598 2.743 5.936 12.046 1.00 61.25 C
ATOM 10 O3' U B2598 2.421 7.258 12.386 1.00 61.32 O
ATOM 11 C2' U B2598 4.088 5.479 12.588 1.00 60.71 C
ATOM 12 O2' U B2598 4.181 5.772 13.991 1.00 60.22 O
ATOM 13 C1' U B2598 3.943 3.968 12.431 1.00 60.68 C
ATOM 14 N1 U B2598 4.490 3.466 11.115 1.00 61.00 N
ATOM 15 C2 U B2598 3.602 3.110 10.127 1.00 61.54 C
ATOM 16 O2 U B2598 2.426 3.181 10.214 1.00 61.78 O
ATOM 17 N3 U B2598 4.031 2.646 8.940 1.00 61.86 N
ATOM 18 C4 U B2598 5.295 2.468 8.568 1.00 61.72 C
ATOM 19 O4 U B2598 5.393 2.021 7.412 1.00 62.12 O
ATOM 20 C5 U B2598 6.242 2.833 9.620 1.00 61.14 C
ATOM 21 C6 U B2598 5.829 3.301 10.827 1.00 60.81 C
ATOM 22 P A B2599 2.779 8.440 11.384 1.00 58.03 P
ATOM 23 OP1 A B2599 2.162 8.139 10.097 1.00 58.62 O
ATOM 24 OP2 A B2599 4.246 8.624 11.432 1.00 57.70 O
ATOM 25 O5' A B2599 2.048 9.659 12.062 1.00 58.08 O
TER
Atoms:
OP1: (-11.844,1.531,17.539)
OP2: (-10.332,0.630,15.645)
C3': (-9.240,5.659,15.643)
C1': (-6.960,5.249,15.828)
C5': (-9.886,3.963,17.474)
O6: (-4.684,2.446,11.080)
O4': (-7.615,4.539,16.854)
C8: (-7.214,3.109,14.459)
C2: (-3.999,5.494,12.718)
C6: (-4.777,3.348,11.896)
C5: (-5.695,3.420,12.981)
C4: (-5.654,4.518,13.813)
P: (-10.499,1.495,16.844)
C4': (-8.956,5.058,17.008)
C2': (-7.921,6.327,15.353)
O2': (-7.765,7.447,16.194)
N1: (-3.931,4.455,11.819)
N2: (-3.166,6.502,12.527)
N3: (-4.834,5.582,13.743)
N7: (-6.684,2.543,13.400)
N9: (-6.631,4.312,14.749)
O5': (-10.029,2.967,16.482)
O3': (-10.347,6.555,15.639)
OP2: (-10.332,0.630,15.645)
C3': (-9.240,5.659,15.643)
C1': (-6.960,5.249,15.828)
C5': (-9.886,3.963,17.474)
O6: (-4.684,2.446,11.080)
O4': (-7.615,4.539,16.854)
C8: (-7.214,3.109,14.459)
C2: (-3.999,5.494,12.718)
C6: (-4.777,3.348,11.896)
C5: (-5.695,3.420,12.981)
C4: (-5.654,4.518,13.813)
P: (-10.499,1.495,16.844)
C4': (-8.956,5.058,17.008)
C2': (-7.921,6.327,15.353)
O2': (-7.765,7.447,16.194)
N1: (-3.931,4.455,11.819)
N2: (-3.166,6.502,12.527)
N3: (-4.834,5.582,13.743)
N7: (-6.684,2.543,13.400)
N9: (-6.631,4.312,14.749)
O5': (-10.029,2.967,16.482)
O3': (-10.347,6.555,15.639)
C4: (5.295,2.468,8.568)
N3: (4.031,2.646,8.940)
OP1: (-1.883,5.474,9.946)
OP2: (-0.333,4.217,8.355)
C2: (3.602,3.110,10.127)
C1': (3.943,3.968,12.431)
C3': (2.743,5.936,12.046)
O5': (0.458,4.956,10.647)
O4': (2.547,3.677,12.530)
C5': (0.430,4.814,12.065)
P: (-0.784,4.518,9.748)
C4': (1.809,4.924,12.674)
C2': (4.088,5.479,12.588)
O2': (4.181,5.772,13.991)
N1: (4.490,3.466,11.115)
O4: (5.393,2.021,7.412)
O2: (2.426,3.181,10.214)
C6: (5.829,3.301,10.827)
C5: (6.242,2.833,9.620)
O3': (2.421,7.258,12.386)
N3: (4.031,2.646,8.940)
OP1: (-1.883,5.474,9.946)
OP2: (-0.333,4.217,8.355)
C2: (3.602,3.110,10.127)
C1': (3.943,3.968,12.431)
C3': (2.743,5.936,12.046)
O5': (0.458,4.956,10.647)
O4': (2.547,3.677,12.530)
C5': (0.430,4.814,12.065)
P: (-0.784,4.518,9.748)
C4': (1.809,4.924,12.674)
C2': (4.088,5.479,12.588)
O2': (4.181,5.772,13.991)
N1: (4.490,3.466,11.115)
O4: (5.393,2.021,7.412)
O2: (2.426,3.181,10.214)
C6: (5.829,3.301,10.827)
C5: (6.242,2.833,9.620)
O3': (2.421,7.258,12.386)
Image (generated by PyMOL):