ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2984:21743

Extra

PDB:
ATOM 1 O3' A A 983 -35.928 -29.293 75.707 1.00 94.43 O
ATOM 2 P G A 984 -35.450 -29.021 77.208 1.00 92.58 P
ATOM 3 OP1 G A 984 -34.173 -29.756 77.408 1.00 93.34 O
ATOM 4 OP2 G A 984 -36.603 -29.324 78.096 1.00 92.92 O
ATOM 5 O5' G A 984 -35.175 -27.466 77.187 1.00 91.05 O
ATOM 6 C5' G A 984 -34.493 -26.872 76.099 1.00 90.46 C
ATOM 7 C4' G A 984 -34.587 -25.384 76.174 1.00 89.05 C
ATOM 8 O4' G A 984 -35.846 -24.950 75.604 1.00 88.64 O
ATOM 9 C3' G A 984 -34.583 -24.822 77.581 1.00 88.55 C
ATOM 10 O3' G A 984 -33.266 -24.650 78.090 1.00 88.43 O
ATOM 11 C2' G A 984 -35.372 -23.523 77.447 1.00 87.35 C
ATOM 12 O2' G A 984 -34.525 -22.477 77.019 1.00 86.40 O
ATOM 13 C1' G A 984 -36.350 -23.848 76.316 1.00 87.64 C
ATOM 14 N9 G A 984 -37.709 -24.178 76.805 1.00 87.99 N
ATOM 15 C8 G A 984 -38.167 -25.381 77.302 1.00 89.13 C
ATOM 16 N7 G A 984 -39.433 -25.316 77.626 1.00 89.15 N
ATOM 17 C5 G A 984 -39.844 -24.023 77.316 1.00 87.98 C
ATOM 18 C6 G A 984 -41.092 -23.376 77.455 1.00 87.51 C
ATOM 19 O6 G A 984 -42.154 -23.839 77.874 1.00 88.04 O
ATOM 20 N1 G A 984 -41.061 -22.060 77.025 1.00 86.33 N
ATOM 21 C2 G A 984 -39.962 -21.428 76.525 1.00 85.68 C
ATOM 22 N2 G A 984 -40.117 -20.147 76.155 1.00 84.59 N
ATOM 23 N3 G A 984 -38.790 -22.012 76.396 1.00 86.10 N
ATOM 24 C4 G A 984 -38.795 -23.302 76.809 1.00 87.25 C
ATOM 25 P A A 985 -32.895 -25.168 79.562 1.00 82.28 P
ATOM 26 OP1 A A 985 -31.554 -24.652 79.884 1.00 81.88 O
ATOM 27 OP2 A A 985 -33.105 -26.614 79.573 1.00 83.65 O
ATOM 28 O5' A A 985 -33.988 -24.436 80.478 1.00 81.64 O
TER

ATOM 1 O3' G B1742 -42.632 -19.520 75.202 1.00 74.37 O
ATOM 2 P U B1743 -43.901 -20.419 75.660 1.00 69.99 P
ATOM 3 OP1 U B1743 -43.380 -21.463 76.589 1.00 70.39 O
ATOM 4 OP2 U B1743 -44.627 -20.848 74.426 1.00 70.48 O
ATOM 5 O5' U B1743 -44.797 -19.397 76.460 1.00 69.68 O
ATOM 6 C5' U B1743 -44.279 -18.161 76.932 1.00 68.87 C
ATOM 7 C4' U B1743 -45.370 -17.361 77.571 1.00 68.76 C
ATOM 8 O4' U B1743 -45.880 -16.401 76.603 1.00 68.44 O
ATOM 9 C3' U B1743 -46.523 -18.215 78.016 1.00 69.53 C
ATOM 10 O3' U B1743 -46.781 -18.068 79.435 1.00 69.53 O
ATOM 11 C2' U B1743 -47.699 -17.868 77.063 1.00 69.72 C
ATOM 12 O2' U B1743 -48.986 -17.804 77.665 1.00 70.08 O
ATOM 13 C1' U B1743 -47.272 -16.532 76.412 1.00 68.92 C
ATOM 14 N1 U B1743 -47.539 -16.449 74.918 1.00 69.01 N
ATOM 15 C2 U B1743 -46.778 -17.288 74.088 1.00 69.24 C
ATOM 16 O2 U B1743 -45.939 -18.073 74.513 1.00 69.38 O
ATOM 17 N3 U B1743 -47.019 -17.246 72.713 1.00 69.36 N
ATOM 18 C4 U B1743 -47.919 -16.462 72.025 1.00 69.28 C
ATOM 19 O4 U B1743 -47.975 -16.599 70.776 1.00 69.45 O
ATOM 20 C5 U B1743 -48.658 -15.583 72.932 1.00 69.01 C
ATOM 21 C6 U B1743 -48.452 -15.601 74.281 1.00 68.89 C
ATOM 22 P A B1744 -47.343 -16.746 80.128 1.00 77.37 P
ATOM 23 OP1 A B1744 -48.068 -17.202 81.361 1.00 77.84 O
ATOM 24 OP2 A B1744 -48.087 -15.987 79.127 1.00 77.21 O
ATOM 25 O5' A B1744 -46.062 -15.922 80.528 1.00 76.58 O
TER

Atoms:
OP1: (-34.173,-29.756,77.408)
OP2: (-36.603,-29.324,78.096)
C3': (-34.583,-24.822,77.581)
C1': (-36.350,-23.848,76.316)
C5': (-34.493,-26.872,76.099)
O6: (-42.154,-23.839,77.874)
O4': (-35.846,-24.950,75.604)
C8: (-38.167,-25.381,77.302)
C2: (-39.962,-21.428,76.525)
C6: (-41.092,-23.376,77.455)
C5: (-39.844,-24.023,77.316)
C4: (-38.795,-23.302,76.809)
P: (-35.450,-29.021,77.208)
C4': (-34.587,-25.384,76.174)
C2': (-35.372,-23.523,77.447)
O2': (-34.525,-22.477,77.019)
N1: (-41.061,-22.060,77.025)
N2: (-40.117,-20.147,76.155)
N3: (-38.790,-22.012,76.396)
N7: (-39.433,-25.316,77.626)
N9: (-37.709,-24.178,76.805)
O5': (-35.175,-27.466,77.187)
O3': (-33.266,-24.650,78.090)
C4: (-47.919,-16.462,72.025)
N3: (-47.019,-17.246,72.713)
OP1: (-43.380,-21.463,76.589)
OP2: (-44.627,-20.848,74.426)
C2: (-46.778,-17.288,74.088)
C1': (-47.272,-16.532,76.412)
C3': (-46.523,-18.215,78.016)
O5': (-44.797,-19.397,76.460)
O4': (-45.880,-16.401,76.603)
C5': (-44.279,-18.161,76.932)
P: (-43.901,-20.419,75.660)
C4': (-45.370,-17.361,77.571)
C2': (-47.699,-17.868,77.063)
O2': (-48.986,-17.804,77.665)
N1: (-47.539,-16.449,74.918)
O4: (-47.975,-16.599,70.776)
O2: (-45.939,-18.073,74.513)
C6: (-48.452,-15.601,74.281)
C5: (-48.658,-15.583,72.932)
O3': (-46.781,-18.068,79.435)
Image (generated by PyMOL):
PyMOL image
show in jmol