Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0463:0453
Extra
PDB:
ATOM 1 O3' C A 462 60.196 134.819 60.261 1.00 24.04 O
ATOM 2 P G A 463 58.767 134.511 59.592 1.00 24.30 P
ATOM 3 OP1 G A 463 58.124 133.504 60.463 1.00 25.82 O
ATOM 4 OP2 G A 463 58.930 134.220 58.149 1.00 25.17 O
ATOM 5 O5' G A 463 57.973 135.875 59.740 1.00 23.13 O
ATOM 6 C5' G A 463 57.620 136.385 61.038 1.00 23.90 C
ATOM 7 C4' G A 463 56.928 137.717 60.903 1.00 24.66 C
ATOM 8 O4' G A 463 57.881 138.734 60.497 1.00 27.93 O
ATOM 9 C3' G A 463 55.866 137.789 59.826 1.00 25.65 C
ATOM 10 O3' G A 463 54.651 137.193 60.234 1.00 27.37 O
ATOM 11 C2' G A 463 55.770 139.288 59.596 1.00 27.37 C
ATOM 12 O2' G A 463 55.098 139.965 60.636 1.00 28.38 O
ATOM 13 C1' G A 463 57.244 139.673 59.637 1.00 27.39 C
ATOM 14 N9 G A 463 57.834 139.548 58.310 1.00 28.07 N
ATOM 15 C8 G A 463 58.517 138.464 57.811 1.00 28.78 C
ATOM 16 N7 G A 463 58.886 138.618 56.570 1.00 28.99 N
ATOM 17 C5 G A 463 58.426 139.883 56.230 1.00 27.43 C
ATOM 18 C6 G A 463 58.514 140.590 55.004 1.00 27.47 C
ATOM 19 O6 G A 463 58.999 140.209 53.929 1.00 27.01 O
ATOM 20 N1 G A 463 57.944 141.856 55.101 1.00 24.25 N
ATOM 21 C2 G A 463 57.345 142.361 56.223 1.00 26.12 C
ATOM 22 N2 G A 463 56.866 143.605 56.121 1.00 24.45 N
ATOM 23 N3 G A 463 57.228 141.698 57.367 1.00 26.90 N
ATOM 24 C4 G A 463 57.791 140.477 57.298 1.00 26.79 C
ATOM 25 P A A 464 53.595 136.697 59.131 1.00 26.86 P
ATOM 26 OP1 A A 464 52.634 135.873 59.895 1.00 29.13 O
ATOM 27 OP2 A A 464 54.270 136.123 57.939 1.00 26.16 O
ATOM 28 O5' A A 464 52.892 138.046 58.678 1.00 26.17 O
TER
ATOM 1 O3' G B 452 56.287 143.645 51.579 1.00 37.73 O
ATOM 2 P U B 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 3 OP1 U B 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 4 OP2 U B 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 5 O5' U B 453 56.354 145.923 52.586 1.00 35.39 O
ATOM 6 C5' U B 453 55.686 146.757 51.627 1.00 34.54 C
ATOM 7 C4' U B 453 54.487 147.407 52.267 1.00 35.38 C
ATOM 8 O4' U B 453 53.424 146.434 52.391 1.00 36.31 O
ATOM 9 C3' U B 453 54.735 147.907 53.679 1.00 35.81 C
ATOM 10 O3' U B 453 55.289 149.218 53.669 1.00 35.68 O
ATOM 11 C2' U B 453 53.348 147.838 54.299 1.00 36.42 C
ATOM 12 O2' U B 453 52.538 148.923 53.911 1.00 36.15 O
ATOM 13 C1' U B 453 52.797 146.560 53.657 1.00 36.46 C
ATOM 14 N1 U B 453 53.047 145.317 54.413 1.00 34.93 N
ATOM 15 C2 U B 453 52.372 145.125 55.607 1.00 35.33 C
ATOM 16 O2 U B 453 51.596 145.940 56.075 1.00 37.56 O
ATOM 17 N3 U B 453 52.644 143.938 56.240 1.00 35.46 N
ATOM 18 C4 U B 453 53.507 142.946 55.820 1.00 35.68 C
ATOM 19 O4 U B 453 53.664 141.941 56.517 1.00 35.77 O
ATOM 20 C5 U B 453 54.170 143.219 54.584 1.00 35.07 C
ATOM 21 C6 U B 453 53.927 144.364 53.941 1.00 34.67 C
ATOM 22 P A B 454 56.500 149.587 54.660 1.00 33.90 P
ATOM 23 OP1 A B 454 56.853 150.997 54.363 1.00 37.09 O
ATOM 24 OP2 A B 454 57.548 148.543 54.573 1.00 32.75 O
ATOM 25 O5' A B 454 55.829 149.546 56.103 1.00 31.41 O
TER
ATOM 2 P G A 463 58.767 134.511 59.592 1.00 24.30 P
ATOM 3 OP1 G A 463 58.124 133.504 60.463 1.00 25.82 O
ATOM 4 OP2 G A 463 58.930 134.220 58.149 1.00 25.17 O
ATOM 5 O5' G A 463 57.973 135.875 59.740 1.00 23.13 O
ATOM 6 C5' G A 463 57.620 136.385 61.038 1.00 23.90 C
ATOM 7 C4' G A 463 56.928 137.717 60.903 1.00 24.66 C
ATOM 8 O4' G A 463 57.881 138.734 60.497 1.00 27.93 O
ATOM 9 C3' G A 463 55.866 137.789 59.826 1.00 25.65 C
ATOM 10 O3' G A 463 54.651 137.193 60.234 1.00 27.37 O
ATOM 11 C2' G A 463 55.770 139.288 59.596 1.00 27.37 C
ATOM 12 O2' G A 463 55.098 139.965 60.636 1.00 28.38 O
ATOM 13 C1' G A 463 57.244 139.673 59.637 1.00 27.39 C
ATOM 14 N9 G A 463 57.834 139.548 58.310 1.00 28.07 N
ATOM 15 C8 G A 463 58.517 138.464 57.811 1.00 28.78 C
ATOM 16 N7 G A 463 58.886 138.618 56.570 1.00 28.99 N
ATOM 17 C5 G A 463 58.426 139.883 56.230 1.00 27.43 C
ATOM 18 C6 G A 463 58.514 140.590 55.004 1.00 27.47 C
ATOM 19 O6 G A 463 58.999 140.209 53.929 1.00 27.01 O
ATOM 20 N1 G A 463 57.944 141.856 55.101 1.00 24.25 N
ATOM 21 C2 G A 463 57.345 142.361 56.223 1.00 26.12 C
ATOM 22 N2 G A 463 56.866 143.605 56.121 1.00 24.45 N
ATOM 23 N3 G A 463 57.228 141.698 57.367 1.00 26.90 N
ATOM 24 C4 G A 463 57.791 140.477 57.298 1.00 26.79 C
ATOM 25 P A A 464 53.595 136.697 59.131 1.00 26.86 P
ATOM 26 OP1 A A 464 52.634 135.873 59.895 1.00 29.13 O
ATOM 27 OP2 A A 464 54.270 136.123 57.939 1.00 26.16 O
ATOM 28 O5' A A 464 52.892 138.046 58.678 1.00 26.17 O
TER
ATOM 1 O3' G B 452 56.287 143.645 51.579 1.00 37.73 O
ATOM 2 P U B 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 3 OP1 U B 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 4 OP2 U B 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 5 O5' U B 453 56.354 145.923 52.586 1.00 35.39 O
ATOM 6 C5' U B 453 55.686 146.757 51.627 1.00 34.54 C
ATOM 7 C4' U B 453 54.487 147.407 52.267 1.00 35.38 C
ATOM 8 O4' U B 453 53.424 146.434 52.391 1.00 36.31 O
ATOM 9 C3' U B 453 54.735 147.907 53.679 1.00 35.81 C
ATOM 10 O3' U B 453 55.289 149.218 53.669 1.00 35.68 O
ATOM 11 C2' U B 453 53.348 147.838 54.299 1.00 36.42 C
ATOM 12 O2' U B 453 52.538 148.923 53.911 1.00 36.15 O
ATOM 13 C1' U B 453 52.797 146.560 53.657 1.00 36.46 C
ATOM 14 N1 U B 453 53.047 145.317 54.413 1.00 34.93 N
ATOM 15 C2 U B 453 52.372 145.125 55.607 1.00 35.33 C
ATOM 16 O2 U B 453 51.596 145.940 56.075 1.00 37.56 O
ATOM 17 N3 U B 453 52.644 143.938 56.240 1.00 35.46 N
ATOM 18 C4 U B 453 53.507 142.946 55.820 1.00 35.68 C
ATOM 19 O4 U B 453 53.664 141.941 56.517 1.00 35.77 O
ATOM 20 C5 U B 453 54.170 143.219 54.584 1.00 35.07 C
ATOM 21 C6 U B 453 53.927 144.364 53.941 1.00 34.67 C
ATOM 22 P A B 454 56.500 149.587 54.660 1.00 33.90 P
ATOM 23 OP1 A B 454 56.853 150.997 54.363 1.00 37.09 O
ATOM 24 OP2 A B 454 57.548 148.543 54.573 1.00 32.75 O
ATOM 25 O5' A B 454 55.829 149.546 56.103 1.00 31.41 O
TER
Atoms:
OP1: (58.124,133.504,60.463)
OP2: (58.930,134.220,58.149)
C3': (55.866,137.789,59.826)
C1': (57.244,139.673,59.637)
C5': (57.620,136.385,61.038)
O6: (58.999,140.209,53.929)
O4': (57.881,138.734,60.497)
C8: (58.517,138.464,57.811)
C2: (57.345,142.361,56.223)
C6: (58.514,140.590,55.004)
C5: (58.426,139.883,56.230)
C4: (57.791,140.477,57.298)
P: (58.767,134.511,59.592)
C4': (56.928,137.717,60.903)
C2': (55.770,139.288,59.596)
O2': (55.098,139.965,60.636)
N1: (57.944,141.856,55.101)
N2: (56.866,143.605,56.121)
N3: (57.228,141.698,57.367)
N7: (58.886,138.618,56.570)
N9: (57.834,139.548,58.310)
O5': (57.973,135.875,59.740)
O3': (54.651,137.193,60.234)
OP2: (58.930,134.220,58.149)
C3': (55.866,137.789,59.826)
C1': (57.244,139.673,59.637)
C5': (57.620,136.385,61.038)
O6: (58.999,140.209,53.929)
O4': (57.881,138.734,60.497)
C8: (58.517,138.464,57.811)
C2: (57.345,142.361,56.223)
C6: (58.514,140.590,55.004)
C5: (58.426,139.883,56.230)
C4: (57.791,140.477,57.298)
P: (58.767,134.511,59.592)
C4': (56.928,137.717,60.903)
C2': (55.770,139.288,59.596)
O2': (55.098,139.965,60.636)
N1: (57.944,141.856,55.101)
N2: (56.866,143.605,56.121)
N3: (57.228,141.698,57.367)
N7: (58.886,138.618,56.570)
N9: (57.834,139.548,58.310)
O5': (57.973,135.875,59.740)
O3': (54.651,137.193,60.234)
C4: (53.507,142.946,55.820)
N3: (52.644,143.938,56.240)
OP1: (58.162,145.232,50.987)
OP2: (57.981,144.216,53.350)
C2: (52.372,145.125,55.607)
C1': (52.797,146.560,53.657)
C3': (54.735,147.907,53.679)
O5': (56.354,145.923,52.586)
O4': (53.424,146.434,52.391)
C5': (55.686,146.757,51.627)
P: (57.322,144.750,52.123)
C4': (54.487,147.407,52.267)
C2': (53.348,147.838,54.299)
O2': (52.538,148.923,53.911)
N1: (53.047,145.317,54.413)
O4: (53.664,141.941,56.517)
O2: (51.596,145.940,56.075)
C6: (53.927,144.364,53.941)
C5: (54.170,143.219,54.584)
O3': (55.289,149.218,53.669)
N3: (52.644,143.938,56.240)
OP1: (58.162,145.232,50.987)
OP2: (57.981,144.216,53.350)
C2: (52.372,145.125,55.607)
C1': (52.797,146.560,53.657)
C3': (54.735,147.907,53.679)
O5': (56.354,145.923,52.586)
O4': (53.424,146.434,52.391)
C5': (55.686,146.757,51.627)
P: (57.322,144.750,52.123)
C4': (54.487,147.407,52.267)
C2': (53.348,147.838,54.299)
O2': (52.538,148.923,53.911)
N1: (53.047,145.317,54.413)
O4: (53.664,141.941,56.517)
O2: (51.596,145.940,56.075)
C6: (53.927,144.364,53.941)
C5: (54.170,143.219,54.584)
O3': (55.289,149.218,53.669)
Image (generated by PyMOL):