Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A898:A1252
Extra
PDB:
ATOM 1 O3' C A 897 30.088 89.347 81.143 1.00 35.35 O
ATOM 2 P G A 898 30.434 89.724 82.668 1.00 36.48 P
ATOM 3 OP1 G A 898 30.662 88.445 83.365 1.00 34.50 O
ATOM 4 OP2 G A 898 29.445 90.704 83.224 1.00 35.40 O
ATOM 5 O5' G A 898 31.843 90.454 82.536 1.00 36.92 O
ATOM 6 C5' G A 898 32.985 89.716 82.034 1.00 37.45 C
ATOM 7 C4' G A 898 34.199 90.611 81.858 1.00 36.71 C
ATOM 8 O4' G A 898 33.880 91.663 80.918 1.00 36.39 O
ATOM 9 C3' G A 898 34.733 91.334 83.089 1.00 35.33 C
ATOM 10 O3' G A 898 35.541 90.444 83.885 1.00 32.16 O
ATOM 11 C2' G A 898 35.424 92.558 82.473 1.00 35.57 C
ATOM 12 O2' G A 898 36.659 92.368 81.811 1.00 35.36 O
ATOM 13 C1' G A 898 34.453 92.885 81.350 1.00 35.50 C
ATOM 14 N9 G A 898 33.376 93.755 81.794 1.00 36.02 N
ATOM 15 C8 G A 898 32.096 93.391 82.120 1.00 36.10 C
ATOM 16 N7 G A 898 31.359 94.400 82.489 1.00 37.98 N
ATOM 17 C5 G A 898 32.208 95.492 82.405 1.00 37.35 C
ATOM 18 C6 G A 898 31.966 96.840 82.673 1.00 37.25 C
ATOM 19 O6 G A 898 30.915 97.358 83.047 1.00 39.24 O
ATOM 20 N1 G A 898 33.100 97.624 82.456 1.00 35.09 N
ATOM 21 C2 G A 898 34.310 97.151 82.029 1.00 34.77 C
ATOM 22 N2 G A 898 35.281 98.058 81.868 1.00 35.00 N
ATOM 23 N3 G A 898 34.548 95.877 81.774 1.00 36.72 N
ATOM 24 C4 G A 898 33.455 95.111 81.978 1.00 37.14 C
ATOM 25 P A A 899 35.784 90.738 85.457 1.00 30.39 P
ATOM 26 OP1 A A 899 36.361 89.498 86.042 1.00 28.57 O
ATOM 27 OP2 A A 899 34.601 91.346 86.097 1.00 29.30 O
ATOM 28 O5' A A 899 36.932 91.845 85.431 1.00 32.80 O
TER
ATOM 1 O3' G B1251 32.531 101.699 84.847 1.00 33.00 O
ATOM 2 P U B1252 33.499 101.701 83.532 1.00 31.91 P
ATOM 3 OP1 U B1252 33.318 102.989 82.781 1.00 32.41 O
ATOM 4 OP2 U B1252 33.443 100.421 82.795 1.00 28.03 O
ATOM 5 O5' U B1252 34.956 101.822 84.159 1.00 33.15 O
ATOM 6 C5' U B1252 35.461 103.085 84.634 1.00 32.66 C
ATOM 7 C4' U B1252 36.945 102.999 84.787 1.00 32.22 C
ATOM 8 O4' U B1252 37.268 101.964 85.736 1.00 32.01 O
ATOM 9 C3' U B1252 37.634 102.559 83.518 1.00 33.26 C
ATOM 10 O3' U B1252 37.869 103.665 82.670 1.00 33.27 O
ATOM 11 C2' U B1252 38.928 101.965 84.035 1.00 33.28 C
ATOM 12 O2' U B1252 39.860 102.978 84.327 1.00 32.94 O
ATOM 13 C1' U B1252 38.455 101.311 85.333 1.00 32.75 C
ATOM 14 N1 U B1252 38.194 99.865 85.255 1.00 33.51 N
ATOM 15 C2 U B1252 39.288 99.005 85.120 1.00 32.79 C
ATOM 16 O2 U B1252 40.434 99.401 85.012 1.00 32.87 O
ATOM 17 N3 U B1252 38.974 97.669 85.106 1.00 31.71 N
ATOM 18 C4 U B1252 37.706 97.121 85.195 1.00 32.64 C
ATOM 19 O4 U B1252 37.572 95.898 85.195 1.00 33.24 O
ATOM 20 C5 U B1252 36.640 98.077 85.304 1.00 31.58 C
ATOM 21 C6 U B1252 36.911 99.375 85.329 1.00 30.58 C
ATOM 22 P A B1253 37.881 103.438 81.099 1.00 33.16 P
ATOM 23 OP1 A B1253 38.288 104.722 80.493 1.00 32.99 O
ATOM 24 OP2 A B1253 36.568 102.847 80.784 1.00 32.68 O
ATOM 25 O5' A B1253 39.056 102.386 80.856 1.00 32.57 O
TER
ATOM 2 P G A 898 30.434 89.724 82.668 1.00 36.48 P
ATOM 3 OP1 G A 898 30.662 88.445 83.365 1.00 34.50 O
ATOM 4 OP2 G A 898 29.445 90.704 83.224 1.00 35.40 O
ATOM 5 O5' G A 898 31.843 90.454 82.536 1.00 36.92 O
ATOM 6 C5' G A 898 32.985 89.716 82.034 1.00 37.45 C
ATOM 7 C4' G A 898 34.199 90.611 81.858 1.00 36.71 C
ATOM 8 O4' G A 898 33.880 91.663 80.918 1.00 36.39 O
ATOM 9 C3' G A 898 34.733 91.334 83.089 1.00 35.33 C
ATOM 10 O3' G A 898 35.541 90.444 83.885 1.00 32.16 O
ATOM 11 C2' G A 898 35.424 92.558 82.473 1.00 35.57 C
ATOM 12 O2' G A 898 36.659 92.368 81.811 1.00 35.36 O
ATOM 13 C1' G A 898 34.453 92.885 81.350 1.00 35.50 C
ATOM 14 N9 G A 898 33.376 93.755 81.794 1.00 36.02 N
ATOM 15 C8 G A 898 32.096 93.391 82.120 1.00 36.10 C
ATOM 16 N7 G A 898 31.359 94.400 82.489 1.00 37.98 N
ATOM 17 C5 G A 898 32.208 95.492 82.405 1.00 37.35 C
ATOM 18 C6 G A 898 31.966 96.840 82.673 1.00 37.25 C
ATOM 19 O6 G A 898 30.915 97.358 83.047 1.00 39.24 O
ATOM 20 N1 G A 898 33.100 97.624 82.456 1.00 35.09 N
ATOM 21 C2 G A 898 34.310 97.151 82.029 1.00 34.77 C
ATOM 22 N2 G A 898 35.281 98.058 81.868 1.00 35.00 N
ATOM 23 N3 G A 898 34.548 95.877 81.774 1.00 36.72 N
ATOM 24 C4 G A 898 33.455 95.111 81.978 1.00 37.14 C
ATOM 25 P A A 899 35.784 90.738 85.457 1.00 30.39 P
ATOM 26 OP1 A A 899 36.361 89.498 86.042 1.00 28.57 O
ATOM 27 OP2 A A 899 34.601 91.346 86.097 1.00 29.30 O
ATOM 28 O5' A A 899 36.932 91.845 85.431 1.00 32.80 O
TER
ATOM 1 O3' G B1251 32.531 101.699 84.847 1.00 33.00 O
ATOM 2 P U B1252 33.499 101.701 83.532 1.00 31.91 P
ATOM 3 OP1 U B1252 33.318 102.989 82.781 1.00 32.41 O
ATOM 4 OP2 U B1252 33.443 100.421 82.795 1.00 28.03 O
ATOM 5 O5' U B1252 34.956 101.822 84.159 1.00 33.15 O
ATOM 6 C5' U B1252 35.461 103.085 84.634 1.00 32.66 C
ATOM 7 C4' U B1252 36.945 102.999 84.787 1.00 32.22 C
ATOM 8 O4' U B1252 37.268 101.964 85.736 1.00 32.01 O
ATOM 9 C3' U B1252 37.634 102.559 83.518 1.00 33.26 C
ATOM 10 O3' U B1252 37.869 103.665 82.670 1.00 33.27 O
ATOM 11 C2' U B1252 38.928 101.965 84.035 1.00 33.28 C
ATOM 12 O2' U B1252 39.860 102.978 84.327 1.00 32.94 O
ATOM 13 C1' U B1252 38.455 101.311 85.333 1.00 32.75 C
ATOM 14 N1 U B1252 38.194 99.865 85.255 1.00 33.51 N
ATOM 15 C2 U B1252 39.288 99.005 85.120 1.00 32.79 C
ATOM 16 O2 U B1252 40.434 99.401 85.012 1.00 32.87 O
ATOM 17 N3 U B1252 38.974 97.669 85.106 1.00 31.71 N
ATOM 18 C4 U B1252 37.706 97.121 85.195 1.00 32.64 C
ATOM 19 O4 U B1252 37.572 95.898 85.195 1.00 33.24 O
ATOM 20 C5 U B1252 36.640 98.077 85.304 1.00 31.58 C
ATOM 21 C6 U B1252 36.911 99.375 85.329 1.00 30.58 C
ATOM 22 P A B1253 37.881 103.438 81.099 1.00 33.16 P
ATOM 23 OP1 A B1253 38.288 104.722 80.493 1.00 32.99 O
ATOM 24 OP2 A B1253 36.568 102.847 80.784 1.00 32.68 O
ATOM 25 O5' A B1253 39.056 102.386 80.856 1.00 32.57 O
TER
Atoms:
OP1: (30.662,88.445,83.365)
OP2: (29.445,90.704,83.224)
C3': (34.733,91.334,83.089)
C1': (34.453,92.885,81.350)
C5': (32.985,89.716,82.034)
O6: (30.915,97.358,83.047)
O4': (33.880,91.663,80.918)
C8: (32.096,93.391,82.120)
C2: (34.310,97.151,82.029)
C6: (31.966,96.840,82.673)
C5: (32.208,95.492,82.405)
C4: (33.455,95.111,81.978)
P: (30.434,89.724,82.668)
C4': (34.199,90.611,81.858)
C2': (35.424,92.558,82.473)
O2': (36.659,92.368,81.811)
N1: (33.100,97.624,82.456)
N2: (35.281,98.058,81.868)
N3: (34.548,95.877,81.774)
N7: (31.359,94.400,82.489)
N9: (33.376,93.755,81.794)
O5': (31.843,90.454,82.536)
O3': (35.541,90.444,83.885)
OP2: (29.445,90.704,83.224)
C3': (34.733,91.334,83.089)
C1': (34.453,92.885,81.350)
C5': (32.985,89.716,82.034)
O6: (30.915,97.358,83.047)
O4': (33.880,91.663,80.918)
C8: (32.096,93.391,82.120)
C2: (34.310,97.151,82.029)
C6: (31.966,96.840,82.673)
C5: (32.208,95.492,82.405)
C4: (33.455,95.111,81.978)
P: (30.434,89.724,82.668)
C4': (34.199,90.611,81.858)
C2': (35.424,92.558,82.473)
O2': (36.659,92.368,81.811)
N1: (33.100,97.624,82.456)
N2: (35.281,98.058,81.868)
N3: (34.548,95.877,81.774)
N7: (31.359,94.400,82.489)
N9: (33.376,93.755,81.794)
O5': (31.843,90.454,82.536)
O3': (35.541,90.444,83.885)
C4: (37.706,97.121,85.195)
N3: (38.974,97.669,85.106)
OP1: (33.318,102.989,82.781)
OP2: (33.443,100.421,82.795)
C2: (39.288,99.005,85.120)
C1': (38.455,101.311,85.333)
C3': (37.634,102.559,83.518)
O5': (34.956,101.822,84.159)
O4': (37.268,101.964,85.736)
C5': (35.461,103.085,84.634)
P: (33.499,101.701,83.532)
C4': (36.945,102.999,84.787)
C2': (38.928,101.965,84.035)
O2': (39.860,102.978,84.327)
N1: (38.194,99.865,85.255)
O4: (37.572,95.898,85.195)
O2: (40.434,99.401,85.012)
C6: (36.911,99.375,85.329)
C5: (36.640,98.077,85.304)
O3': (37.869,103.665,82.670)
N3: (38.974,97.669,85.106)
OP1: (33.318,102.989,82.781)
OP2: (33.443,100.421,82.795)
C2: (39.288,99.005,85.120)
C1': (38.455,101.311,85.333)
C3': (37.634,102.559,83.518)
O5': (34.956,101.822,84.159)
O4': (37.268,101.964,85.736)
C5': (35.461,103.085,84.634)
P: (33.499,101.701,83.532)
C4': (36.945,102.999,84.787)
C2': (38.928,101.965,84.035)
O2': (39.860,102.978,84.327)
N1: (38.194,99.865,85.255)
O4: (37.572,95.898,85.195)
O2: (40.434,99.401,85.012)
C6: (36.911,99.375,85.329)
C5: (36.640,98.077,85.304)
O3': (37.869,103.665,82.670)
Image (generated by PyMOL):