Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0523:02010
Extra
PDB:
ATOM 1 O3' C A 522 25.209 130.392 109.616 1.00 42.36 O
ATOM 2 P G A 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 3 OP1 G A 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 4 OP2 G A 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 5 O5' G A 523 26.807 128.573 109.002 1.00 44.10 O
ATOM 6 C5' G A 523 26.966 128.996 107.645 1.00 39.27 C
ATOM 7 C4' G A 523 28.190 128.364 107.050 1.00 38.05 C
ATOM 8 O4' G A 523 29.369 128.954 107.652 1.00 37.85 O
ATOM 9 C3' G A 523 28.332 126.856 107.258 1.00 37.17 C
ATOM 10 O3' G A 523 28.992 126.339 106.117 1.00 38.45 O
ATOM 11 C2' G A 523 29.326 126.776 108.410 1.00 36.28 C
ATOM 12 O2' G A 523 30.039 125.557 108.417 1.00 38.37 O
ATOM 13 C1' G A 523 30.246 127.921 108.022 1.00 35.87 C
ATOM 14 N9 G A 523 31.212 128.445 108.976 1.00 36.65 N
ATOM 15 C8 G A 523 31.105 128.575 110.342 1.00 35.17 C
ATOM 16 N7 G A 523 32.159 129.122 110.882 1.00 33.22 N
ATOM 17 C5 G A 523 33.009 129.355 109.809 1.00 33.49 C
ATOM 18 C6 G A 523 34.299 129.925 109.765 1.00 33.07 C
ATOM 19 O6 G A 523 34.984 130.345 110.699 1.00 34.02 O
ATOM 20 N1 G A 523 34.791 129.975 108.463 1.00 31.88 N
ATOM 21 C2 G A 523 34.130 129.522 107.350 1.00 31.21 C
ATOM 22 N2 G A 523 34.761 129.638 106.173 1.00 29.36 N
ATOM 23 N3 G A 523 32.934 128.989 107.385 1.00 33.13 N
ATOM 24 C4 G A 523 32.437 128.938 108.633 1.00 33.83 C
ATOM 25 P A A 524 28.191 125.435 105.074 1.00 40.54 P
ATOM 26 OP1 A A 524 27.000 126.220 104.631 1.00 38.80 O
ATOM 27 OP2 A A 524 28.003 124.087 105.668 1.00 37.44 O
ATOM 28 O5' A A 524 29.215 125.318 103.858 1.00 39.57 O
TER
ATOM 1 O3' U B2009 38.209 132.528 107.817 1.00 27.93 O
ATOM 2 P U B2010 38.414 131.177 106.968 1.00 29.40 P
ATOM 3 OP1 U B2010 38.895 131.584 105.636 1.00 31.22 O
ATOM 4 OP2 U B2010 37.191 130.363 107.079 1.00 34.01 O
ATOM 5 O5' U B2010 39.532 130.338 107.737 1.00 29.55 O
ATOM 6 C5' U B2010 40.617 130.987 108.393 1.00 32.48 C
ATOM 7 C4' U B2010 40.361 131.104 109.887 1.00 31.42 C
ATOM 8 O4' U B2010 38.935 131.081 110.185 1.00 31.08 O
ATOM 9 C3' U B2010 40.910 130.016 110.792 1.00 29.66 C
ATOM 10 O3' U B2010 42.308 130.183 110.995 1.00 28.27 O
ATOM 11 C2' U B2010 40.135 130.293 112.070 1.00 30.06 C
ATOM 12 O2' U B2010 40.597 131.460 112.710 1.00 30.97 O
ATOM 13 C1' U B2010 38.745 130.611 111.513 1.00 31.60 C
ATOM 14 N1 U B2010 37.848 129.438 111.512 1.00 31.83 N
ATOM 15 C2 U B2010 37.412 128.970 112.745 1.00 32.57 C
ATOM 16 O2 U B2010 37.746 129.471 113.803 1.00 35.43 O
ATOM 17 N3 U B2010 36.573 127.893 112.697 1.00 32.84 N
ATOM 18 C4 U B2010 36.122 127.242 111.578 1.00 33.39 C
ATOM 19 O4 U B2010 35.299 126.334 111.704 1.00 31.64 O
ATOM 20 C5 U B2010 36.620 127.766 110.342 1.00 32.17 C
ATOM 21 C6 U B2010 37.446 128.820 110.352 1.00 32.18 C
ATOM 22 P C B2011 43.240 128.901 111.294 1.00 26.55 P
ATOM 23 OP1 C B2011 44.640 129.394 111.207 1.00 27.03 O
ATOM 24 OP2 C B2011 42.829 127.729 110.492 1.00 23.17 O
ATOM 25 O5' C B2011 42.940 128.572 112.818 1.00 27.12 O
TER
ATOM 2 P G A 523 25.429 128.805 109.755 1.00 45.46 P
ATOM 3 OP1 G A 523 24.360 128.149 108.961 1.00 47.16 O
ATOM 4 OP2 G A 523 25.626 128.412 111.176 1.00 46.86 O
ATOM 5 O5' G A 523 26.807 128.573 109.002 1.00 44.10 O
ATOM 6 C5' G A 523 26.966 128.996 107.645 1.00 39.27 C
ATOM 7 C4' G A 523 28.190 128.364 107.050 1.00 38.05 C
ATOM 8 O4' G A 523 29.369 128.954 107.652 1.00 37.85 O
ATOM 9 C3' G A 523 28.332 126.856 107.258 1.00 37.17 C
ATOM 10 O3' G A 523 28.992 126.339 106.117 1.00 38.45 O
ATOM 11 C2' G A 523 29.326 126.776 108.410 1.00 36.28 C
ATOM 12 O2' G A 523 30.039 125.557 108.417 1.00 38.37 O
ATOM 13 C1' G A 523 30.246 127.921 108.022 1.00 35.87 C
ATOM 14 N9 G A 523 31.212 128.445 108.976 1.00 36.65 N
ATOM 15 C8 G A 523 31.105 128.575 110.342 1.00 35.17 C
ATOM 16 N7 G A 523 32.159 129.122 110.882 1.00 33.22 N
ATOM 17 C5 G A 523 33.009 129.355 109.809 1.00 33.49 C
ATOM 18 C6 G A 523 34.299 129.925 109.765 1.00 33.07 C
ATOM 19 O6 G A 523 34.984 130.345 110.699 1.00 34.02 O
ATOM 20 N1 G A 523 34.791 129.975 108.463 1.00 31.88 N
ATOM 21 C2 G A 523 34.130 129.522 107.350 1.00 31.21 C
ATOM 22 N2 G A 523 34.761 129.638 106.173 1.00 29.36 N
ATOM 23 N3 G A 523 32.934 128.989 107.385 1.00 33.13 N
ATOM 24 C4 G A 523 32.437 128.938 108.633 1.00 33.83 C
ATOM 25 P A A 524 28.191 125.435 105.074 1.00 40.54 P
ATOM 26 OP1 A A 524 27.000 126.220 104.631 1.00 38.80 O
ATOM 27 OP2 A A 524 28.003 124.087 105.668 1.00 37.44 O
ATOM 28 O5' A A 524 29.215 125.318 103.858 1.00 39.57 O
TER
ATOM 1 O3' U B2009 38.209 132.528 107.817 1.00 27.93 O
ATOM 2 P U B2010 38.414 131.177 106.968 1.00 29.40 P
ATOM 3 OP1 U B2010 38.895 131.584 105.636 1.00 31.22 O
ATOM 4 OP2 U B2010 37.191 130.363 107.079 1.00 34.01 O
ATOM 5 O5' U B2010 39.532 130.338 107.737 1.00 29.55 O
ATOM 6 C5' U B2010 40.617 130.987 108.393 1.00 32.48 C
ATOM 7 C4' U B2010 40.361 131.104 109.887 1.00 31.42 C
ATOM 8 O4' U B2010 38.935 131.081 110.185 1.00 31.08 O
ATOM 9 C3' U B2010 40.910 130.016 110.792 1.00 29.66 C
ATOM 10 O3' U B2010 42.308 130.183 110.995 1.00 28.27 O
ATOM 11 C2' U B2010 40.135 130.293 112.070 1.00 30.06 C
ATOM 12 O2' U B2010 40.597 131.460 112.710 1.00 30.97 O
ATOM 13 C1' U B2010 38.745 130.611 111.513 1.00 31.60 C
ATOM 14 N1 U B2010 37.848 129.438 111.512 1.00 31.83 N
ATOM 15 C2 U B2010 37.412 128.970 112.745 1.00 32.57 C
ATOM 16 O2 U B2010 37.746 129.471 113.803 1.00 35.43 O
ATOM 17 N3 U B2010 36.573 127.893 112.697 1.00 32.84 N
ATOM 18 C4 U B2010 36.122 127.242 111.578 1.00 33.39 C
ATOM 19 O4 U B2010 35.299 126.334 111.704 1.00 31.64 O
ATOM 20 C5 U B2010 36.620 127.766 110.342 1.00 32.17 C
ATOM 21 C6 U B2010 37.446 128.820 110.352 1.00 32.18 C
ATOM 22 P C B2011 43.240 128.901 111.294 1.00 26.55 P
ATOM 23 OP1 C B2011 44.640 129.394 111.207 1.00 27.03 O
ATOM 24 OP2 C B2011 42.829 127.729 110.492 1.00 23.17 O
ATOM 25 O5' C B2011 42.940 128.572 112.818 1.00 27.12 O
TER
Atoms:
OP1: (24.360,128.149,108.961)
OP2: (25.626,128.412,111.176)
C3': (28.332,126.856,107.258)
C1': (30.246,127.921,108.022)
C5': (26.966,128.996,107.645)
O6: (34.984,130.345,110.699)
O4': (29.369,128.954,107.652)
C8: (31.105,128.575,110.342)
C2: (34.130,129.522,107.350)
C6: (34.299,129.925,109.765)
C5: (33.009,129.355,109.809)
C4: (32.437,128.938,108.633)
P: (25.429,128.805,109.755)
C4': (28.190,128.364,107.050)
C2': (29.326,126.776,108.410)
O2': (30.039,125.557,108.417)
N1: (34.791,129.975,108.463)
N2: (34.761,129.638,106.173)
N3: (32.934,128.989,107.385)
N7: (32.159,129.122,110.882)
N9: (31.212,128.445,108.976)
O5': (26.807,128.573,109.002)
O3': (28.992,126.339,106.117)
OP2: (25.626,128.412,111.176)
C3': (28.332,126.856,107.258)
C1': (30.246,127.921,108.022)
C5': (26.966,128.996,107.645)
O6: (34.984,130.345,110.699)
O4': (29.369,128.954,107.652)
C8: (31.105,128.575,110.342)
C2: (34.130,129.522,107.350)
C6: (34.299,129.925,109.765)
C5: (33.009,129.355,109.809)
C4: (32.437,128.938,108.633)
P: (25.429,128.805,109.755)
C4': (28.190,128.364,107.050)
C2': (29.326,126.776,108.410)
O2': (30.039,125.557,108.417)
N1: (34.791,129.975,108.463)
N2: (34.761,129.638,106.173)
N3: (32.934,128.989,107.385)
N7: (32.159,129.122,110.882)
N9: (31.212,128.445,108.976)
O5': (26.807,128.573,109.002)
O3': (28.992,126.339,106.117)
C4: (36.122,127.242,111.578)
N3: (36.573,127.893,112.697)
OP1: (38.895,131.584,105.636)
OP2: (37.191,130.363,107.079)
C2: (37.412,128.970,112.745)
C1': (38.745,130.611,111.513)
C3': (40.910,130.016,110.792)
O5': (39.532,130.338,107.737)
O4': (38.935,131.081,110.185)
C5': (40.617,130.987,108.393)
P: (38.414,131.177,106.968)
C4': (40.361,131.104,109.887)
C2': (40.135,130.293,112.070)
O2': (40.597,131.460,112.710)
N1: (37.848,129.438,111.512)
O4: (35.299,126.334,111.704)
O2: (37.746,129.471,113.803)
C6: (37.446,128.820,110.352)
C5: (36.620,127.766,110.342)
O3': (42.308,130.183,110.995)
N3: (36.573,127.893,112.697)
OP1: (38.895,131.584,105.636)
OP2: (37.191,130.363,107.079)
C2: (37.412,128.970,112.745)
C1': (38.745,130.611,111.513)
C3': (40.910,130.016,110.792)
O5': (39.532,130.338,107.737)
O4': (38.935,131.081,110.185)
C5': (40.617,130.987,108.393)
P: (38.414,131.177,106.968)
C4': (40.361,131.104,109.887)
C2': (40.135,130.293,112.070)
O2': (40.597,131.460,112.710)
N1: (37.848,129.438,111.512)
O4: (35.299,126.334,111.704)
O2: (37.746,129.471,113.803)
C6: (37.446,128.820,110.352)
C5: (36.620,127.766,110.342)
O3': (42.308,130.183,110.995)
Image (generated by PyMOL):