Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2004:A1260
Extra
PDB:
ATOM 1 O3' U A2003 -11.817 123.305 193.769 1.00 0.01 O
ATOM 2 P G A2004 -13.076 124.229 194.180 1.00 0.01 P
ATOM 3 OP1 G A2004 -12.682 125.625 193.962 1.00 0.01 O
ATOM 4 OP2 G A2004 -13.508 123.832 195.530 1.00 0.01 O
ATOM 5 O5' G A2004 -14.174 123.819 193.095 1.00 0.01 O
ATOM 6 C5' G A2004 -14.037 124.261 191.748 1.00 0.01 C
ATOM 7 C4' G A2004 -15.110 123.717 190.827 1.00 0.01 C
ATOM 8 O4' G A2004 -14.981 122.281 190.692 1.00 0.01 O
ATOM 9 C3' G A2004 -16.553 123.930 191.249 1.00 0.01 C
ATOM 10 O3' G A2004 -17.045 125.211 190.930 1.00 0.01 O
ATOM 11 C2' G A2004 -17.263 122.824 190.497 1.00 0.01 C
ATOM 12 O2' G A2004 -17.411 123.157 189.128 1.00 0.01 O
ATOM 13 C1' G A2004 -16.255 121.696 190.622 1.00 0.01 C
ATOM 14 N9 G A2004 -16.466 120.977 191.858 1.00 0.01 N
ATOM 15 C8 G A2004 -15.934 121.412 193.027 1.00 0.01 C
ATOM 16 N7 G A2004 -16.265 120.664 194.023 1.00 0.01 N
ATOM 17 C5 G A2004 -17.070 119.702 193.446 1.00 0.01 C
ATOM 18 C6 G A2004 -17.698 118.628 194.074 1.00 0.01 C
ATOM 19 O6 G A2004 -17.656 118.358 195.276 1.00 0.01 O
ATOM 20 N1 G A2004 -18.406 117.879 193.149 1.00 0.01 N
ATOM 21 C2 G A2004 -18.490 118.152 191.813 1.00 0.01 C
ATOM 22 N2 G A2004 -19.240 117.322 191.095 1.00 0.01 N
ATOM 23 N3 G A2004 -17.913 119.169 191.211 1.00 0.01 N
ATOM 24 C4 G A2004 -17.224 119.886 192.097 1.00 0.01 C
ATOM 25 P A A2005 -18.556 125.571 191.267 1.00 0.01 P
ATOM 26 OP1 A A2005 -18.802 126.958 190.817 1.00 0.01 O
ATOM 27 OP2 A A2005 -18.771 125.241 192.685 1.00 0.01 O
ATOM 28 O5' A A2005 -19.369 124.577 190.369 1.00 0.01 O
TER
ATOM 1 O3' G B1259 -22.130 115.938 194.067 1.00 0.01 O
ATOM 2 P U B1260 -21.092 114.914 193.377 1.00 0.47 P
ATOM 3 OP1 U B1260 -21.020 113.703 194.238 1.00 0.47 O
ATOM 4 OP2 U B1260 -19.860 115.669 193.109 1.00 0.47 O
ATOM 5 O5' U B1260 -21.790 114.566 191.993 1.00 0.47 O
ATOM 6 C5' U B1260 -22.993 113.814 191.943 1.00 0.47 C
ATOM 7 C4' U B1260 -23.840 114.185 190.735 1.00 0.47 C
ATOM 8 O4' U B1260 -24.435 115.491 190.942 1.00 0.47 O
ATOM 9 C3' U B1260 -23.112 114.301 189.388 1.00 0.47 C
ATOM 10 O3' U B1260 -22.975 113.042 188.721 1.00 0.47 O
ATOM 11 C2' U B1260 -24.002 115.263 188.635 1.00 0.47 C
ATOM 12 O2' U B1260 -25.152 114.586 188.169 1.00 0.47 O
ATOM 13 C1' U B1260 -24.450 116.209 189.737 1.00 0.47 C
ATOM 14 N1 U B1260 -23.577 117.405 189.873 1.00 0.36 N
ATOM 15 C2 U B1260 -23.515 118.313 188.846 1.00 0.36 C
ATOM 16 O2 U B1260 -24.092 118.184 187.805 1.00 0.36 O
ATOM 17 N3 U B1260 -22.724 119.399 189.040 1.00 0.36 N
ATOM 18 C4 U B1260 -22.016 119.699 190.158 1.00 0.36 C
ATOM 19 O4 U B1260 -21.358 120.721 190.154 1.00 0.36 O
ATOM 20 C5 U B1260 -22.120 118.749 191.208 1.00 0.36 C
ATOM 21 C6 U B1260 -22.883 117.667 191.029 1.00 0.36 C
ATOM 22 P A B1261 -21.632 112.657 187.931 1.00 0.01 P
ATOM 23 OP1 A B1261 -21.837 111.338 187.346 1.00 0.01 O
ATOM 24 OP2 A B1261 -20.515 112.840 188.856 1.00 0.01 O
ATOM 25 O5' A B1261 -21.560 113.759 186.793 1.00 0.01 O
TER
ATOM 2 P G A2004 -13.076 124.229 194.180 1.00 0.01 P
ATOM 3 OP1 G A2004 -12.682 125.625 193.962 1.00 0.01 O
ATOM 4 OP2 G A2004 -13.508 123.832 195.530 1.00 0.01 O
ATOM 5 O5' G A2004 -14.174 123.819 193.095 1.00 0.01 O
ATOM 6 C5' G A2004 -14.037 124.261 191.748 1.00 0.01 C
ATOM 7 C4' G A2004 -15.110 123.717 190.827 1.00 0.01 C
ATOM 8 O4' G A2004 -14.981 122.281 190.692 1.00 0.01 O
ATOM 9 C3' G A2004 -16.553 123.930 191.249 1.00 0.01 C
ATOM 10 O3' G A2004 -17.045 125.211 190.930 1.00 0.01 O
ATOM 11 C2' G A2004 -17.263 122.824 190.497 1.00 0.01 C
ATOM 12 O2' G A2004 -17.411 123.157 189.128 1.00 0.01 O
ATOM 13 C1' G A2004 -16.255 121.696 190.622 1.00 0.01 C
ATOM 14 N9 G A2004 -16.466 120.977 191.858 1.00 0.01 N
ATOM 15 C8 G A2004 -15.934 121.412 193.027 1.00 0.01 C
ATOM 16 N7 G A2004 -16.265 120.664 194.023 1.00 0.01 N
ATOM 17 C5 G A2004 -17.070 119.702 193.446 1.00 0.01 C
ATOM 18 C6 G A2004 -17.698 118.628 194.074 1.00 0.01 C
ATOM 19 O6 G A2004 -17.656 118.358 195.276 1.00 0.01 O
ATOM 20 N1 G A2004 -18.406 117.879 193.149 1.00 0.01 N
ATOM 21 C2 G A2004 -18.490 118.152 191.813 1.00 0.01 C
ATOM 22 N2 G A2004 -19.240 117.322 191.095 1.00 0.01 N
ATOM 23 N3 G A2004 -17.913 119.169 191.211 1.00 0.01 N
ATOM 24 C4 G A2004 -17.224 119.886 192.097 1.00 0.01 C
ATOM 25 P A A2005 -18.556 125.571 191.267 1.00 0.01 P
ATOM 26 OP1 A A2005 -18.802 126.958 190.817 1.00 0.01 O
ATOM 27 OP2 A A2005 -18.771 125.241 192.685 1.00 0.01 O
ATOM 28 O5' A A2005 -19.369 124.577 190.369 1.00 0.01 O
TER
ATOM 1 O3' G B1259 -22.130 115.938 194.067 1.00 0.01 O
ATOM 2 P U B1260 -21.092 114.914 193.377 1.00 0.47 P
ATOM 3 OP1 U B1260 -21.020 113.703 194.238 1.00 0.47 O
ATOM 4 OP2 U B1260 -19.860 115.669 193.109 1.00 0.47 O
ATOM 5 O5' U B1260 -21.790 114.566 191.993 1.00 0.47 O
ATOM 6 C5' U B1260 -22.993 113.814 191.943 1.00 0.47 C
ATOM 7 C4' U B1260 -23.840 114.185 190.735 1.00 0.47 C
ATOM 8 O4' U B1260 -24.435 115.491 190.942 1.00 0.47 O
ATOM 9 C3' U B1260 -23.112 114.301 189.388 1.00 0.47 C
ATOM 10 O3' U B1260 -22.975 113.042 188.721 1.00 0.47 O
ATOM 11 C2' U B1260 -24.002 115.263 188.635 1.00 0.47 C
ATOM 12 O2' U B1260 -25.152 114.586 188.169 1.00 0.47 O
ATOM 13 C1' U B1260 -24.450 116.209 189.737 1.00 0.47 C
ATOM 14 N1 U B1260 -23.577 117.405 189.873 1.00 0.36 N
ATOM 15 C2 U B1260 -23.515 118.313 188.846 1.00 0.36 C
ATOM 16 O2 U B1260 -24.092 118.184 187.805 1.00 0.36 O
ATOM 17 N3 U B1260 -22.724 119.399 189.040 1.00 0.36 N
ATOM 18 C4 U B1260 -22.016 119.699 190.158 1.00 0.36 C
ATOM 19 O4 U B1260 -21.358 120.721 190.154 1.00 0.36 O
ATOM 20 C5 U B1260 -22.120 118.749 191.208 1.00 0.36 C
ATOM 21 C6 U B1260 -22.883 117.667 191.029 1.00 0.36 C
ATOM 22 P A B1261 -21.632 112.657 187.931 1.00 0.01 P
ATOM 23 OP1 A B1261 -21.837 111.338 187.346 1.00 0.01 O
ATOM 24 OP2 A B1261 -20.515 112.840 188.856 1.00 0.01 O
ATOM 25 O5' A B1261 -21.560 113.759 186.793 1.00 0.01 O
TER
Atoms:
OP1: (-12.682,125.625,193.962)
OP2: (-13.508,123.832,195.530)
C3': (-16.553,123.930,191.249)
C1': (-16.255,121.696,190.622)
C5': (-14.037,124.261,191.748)
O6: (-17.656,118.358,195.276)
O4': (-14.981,122.281,190.692)
C8: (-15.934,121.412,193.027)
C2: (-18.490,118.152,191.813)
C6: (-17.698,118.628,194.074)
C5: (-17.070,119.702,193.446)
C4: (-17.224,119.886,192.097)
P: (-13.076,124.229,194.180)
C4': (-15.110,123.717,190.827)
C2': (-17.263,122.824,190.497)
O2': (-17.411,123.157,189.128)
N1: (-18.406,117.879,193.149)
N2: (-19.240,117.322,191.095)
N3: (-17.913,119.169,191.211)
N7: (-16.265,120.664,194.023)
N9: (-16.466,120.977,191.858)
O5': (-14.174,123.819,193.095)
O3': (-17.045,125.211,190.930)
OP2: (-13.508,123.832,195.530)
C3': (-16.553,123.930,191.249)
C1': (-16.255,121.696,190.622)
C5': (-14.037,124.261,191.748)
O6: (-17.656,118.358,195.276)
O4': (-14.981,122.281,190.692)
C8: (-15.934,121.412,193.027)
C2: (-18.490,118.152,191.813)
C6: (-17.698,118.628,194.074)
C5: (-17.070,119.702,193.446)
C4: (-17.224,119.886,192.097)
P: (-13.076,124.229,194.180)
C4': (-15.110,123.717,190.827)
C2': (-17.263,122.824,190.497)
O2': (-17.411,123.157,189.128)
N1: (-18.406,117.879,193.149)
N2: (-19.240,117.322,191.095)
N3: (-17.913,119.169,191.211)
N7: (-16.265,120.664,194.023)
N9: (-16.466,120.977,191.858)
O5': (-14.174,123.819,193.095)
O3': (-17.045,125.211,190.930)
C4: (-22.016,119.699,190.158)
N3: (-22.724,119.399,189.040)
OP1: (-21.020,113.703,194.238)
OP2: (-19.860,115.669,193.109)
C2: (-23.515,118.313,188.846)
C1': (-24.450,116.209,189.737)
C3': (-23.112,114.301,189.388)
O5': (-21.790,114.566,191.993)
O4': (-24.435,115.491,190.942)
C5': (-22.993,113.814,191.943)
P: (-21.092,114.914,193.377)
C4': (-23.840,114.185,190.735)
C2': (-24.002,115.263,188.635)
O2': (-25.152,114.586,188.169)
N1: (-23.577,117.405,189.873)
O4: (-21.358,120.721,190.154)
O2: (-24.092,118.184,187.805)
C6: (-22.883,117.667,191.029)
C5: (-22.120,118.749,191.208)
O3': (-22.975,113.042,188.721)
N3: (-22.724,119.399,189.040)
OP1: (-21.020,113.703,194.238)
OP2: (-19.860,115.669,193.109)
C2: (-23.515,118.313,188.846)
C1': (-24.450,116.209,189.737)
C3': (-23.112,114.301,189.388)
O5': (-21.790,114.566,191.993)
O4': (-24.435,115.491,190.942)
C5': (-22.993,113.814,191.943)
P: (-21.092,114.914,193.377)
C4': (-23.840,114.185,190.735)
C2': (-24.002,115.263,188.635)
O2': (-25.152,114.586,188.169)
N1: (-23.577,117.405,189.873)
O4: (-21.358,120.721,190.154)
O2: (-24.092,118.184,187.805)
C6: (-22.883,117.667,191.029)
C5: (-22.120,118.749,191.208)
O3': (-22.975,113.042,188.721)
Image (generated by PyMOL):