ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:6901:61002

Extra

PDB:
ATOM 1 O3' A A 900 218.585 -35.467 220.502 1.00 81.51 O
ATOM 2 P A A 901 217.570 -35.579 219.285 1.00 87.99 P
ATOM 3 OP1 A A 901 216.928 -36.940 219.353 1.00 88.84 O
ATOM 4 OP2 A A 901 218.321 -35.197 218.049 1.00 87.82 O
ATOM 5 O5' A A 901 216.509 -34.455 219.644 1.00 87.25 O
ATOM 6 C5' A A 901 215.832 -34.464 220.883 1.00 87.24 C
ATOM 7 C4' A A 901 215.151 -33.159 221.106 1.00 86.44 C
ATOM 8 O4' A A 901 216.149 -32.142 221.383 1.00 85.83 O
ATOM 9 C3' A A 901 214.387 -32.618 219.915 1.00 86.11 C
ATOM 10 O3' A A 901 213.094 -33.179 219.794 1.00 86.47 O
ATOM 11 C2' A A 901 214.381 -31.124 220.180 1.00 85.22 C
ATOM 12 O2' A A 901 213.377 -30.787 221.134 1.00 85.05 O
ATOM 13 C1' A A 901 215.763 -30.918 220.818 1.00 85.10 C
ATOM 14 N9 A A 901 216.779 -30.537 219.820 1.00 84.90 N
ATOM 15 C8 A A 901 217.564 -31.428 219.154 1.00 85.46 C
ATOM 16 N7 A A 901 218.375 -30.880 218.293 1.00 85.20 N
ATOM 17 C5 A A 901 218.112 -29.535 218.387 1.00 84.40 C
ATOM 18 C6 A A 901 218.667 -28.442 217.706 1.00 83.84 C
ATOM 19 N6 A A 901 219.633 -28.593 216.789 1.00 84.04 N
ATOM 20 N1 A A 901 218.197 -27.201 218.005 1.00 83.12 N
ATOM 21 C2 A A 901 217.241 -27.112 218.931 1.00 83.01 C
ATOM 22 N3 A A 901 216.650 -28.081 219.638 1.00 83.51 N
ATOM 23 C4 A A 901 217.130 -29.294 219.322 1.00 84.20 C
ATOM 24 P U A 902 212.357 -33.212 218.365 1.00 95.23 P
ATOM 25 OP1 U A 902 211.095 -33.960 218.539 1.00 95.72 O
ATOM 26 OP2 U A 902 213.336 -33.707 217.377 1.00 95.53 O
ATOM 27 O5' U A 902 212.049 -31.671 218.087 1.00 94.33 O
TER

ATOM 1 O3' C B1001 224.947 -21.560 218.408 1.00 64.76 O
ATOM 2 P G B1002 224.227 -21.041 217.066 1.00 67.29 P
ATOM 3 OP1 G B1002 225.169 -21.252 215.928 1.00 67.61 O
ATOM 4 OP2 G B1002 223.754 -19.692 217.335 1.00 66.57 O
ATOM 5 O5' G B1002 222.993 -22.026 216.934 1.00 67.65 O
ATOM 6 C5' G B1002 223.174 -23.418 217.063 1.00 68.36 C
ATOM 7 C4' G B1002 221.882 -24.160 216.880 1.00 68.64 C
ATOM 8 O4' G B1002 221.128 -24.141 218.109 1.00 68.48 O
ATOM 9 C3' G B1002 220.926 -23.577 215.870 1.00 68.35 C
ATOM 10 O3' G B1002 221.261 -23.907 214.557 1.00 68.67 O
ATOM 11 C2' G B1002 219.599 -24.152 216.307 1.00 68.51 C
ATOM 12 O2' G B1002 219.508 -25.508 215.918 1.00 69.25 O
ATOM 13 C1' G B1002 219.748 -24.111 217.818 1.00 68.40 C
ATOM 14 N9 G B1002 219.174 -22.889 218.395 1.00 67.71 N
ATOM 15 C8 G B1002 219.892 -21.836 218.893 1.00 67.20 C
ATOM 16 N7 G B1002 219.149 -20.877 219.366 1.00 66.67 N
ATOM 17 C5 G B1002 217.856 -21.356 219.171 1.00 66.87 C
ATOM 18 C6 G B1002 216.628 -20.733 219.485 1.00 66.54 C
ATOM 19 O6 G B1002 216.520 -19.608 220.024 1.00 65.99 O
ATOM 20 N1 G B1002 215.539 -21.532 219.125 1.00 66.93 N
ATOM 21 C2 G B1002 215.652 -22.762 218.540 1.00 67.56 C
ATOM 22 N2 G B1002 214.521 -23.418 218.263 1.00 67.91 N
ATOM 23 N3 G B1002 216.791 -23.349 218.242 1.00 67.88 N
ATOM 24 C4 G B1002 217.849 -22.595 218.581 1.00 67.51 C
ATOM 25 P U B1003 220.780 -22.958 213.392 1.00 72.63 P
ATOM 26 OP1 U B1003 221.297 -23.522 212.106 1.00 73.14 O
ATOM 27 OP2 U B1003 221.160 -21.579 213.788 1.00 71.94 O
ATOM 28 O5' U B1003 219.202 -23.117 213.455 1.00 72.60 O
TER

Atoms:
OP1: (216.928,-36.940,219.353)
OP2: (218.321,-35.197,218.049)
C3': (214.387,-32.618,219.915)
C1': (215.763,-30.918,220.818)
C5': (215.832,-34.464,220.883)
O4': (216.149,-32.142,221.383)
C8: (217.564,-31.428,219.154)
O2': (213.377,-30.787,221.134)
C6: (218.667,-28.442,217.706)
C5: (218.112,-29.535,218.387)
C4: (217.130,-29.294,219.322)
P: (217.570,-35.579,219.285)
C4': (215.151,-33.159,221.106)
C2': (214.381,-31.124,220.180)
C2: (217.241,-27.112,218.931)
N1: (218.197,-27.201,218.005)
N3: (216.650,-28.081,219.638)
N6: (219.633,-28.593,216.789)
N7: (218.375,-30.880,218.293)
N9: (216.779,-30.537,219.820)
O5': (216.509,-34.455,219.644)
O3': (213.094,-33.179,219.794)
OP1: (225.169,-21.252,215.928)
OP2: (223.754,-19.692,217.335)
C3': (220.926,-23.577,215.870)
C1': (219.748,-24.111,217.818)
C5': (223.174,-23.418,217.063)
O6: (216.520,-19.608,220.024)
O4': (221.128,-24.141,218.109)
C8: (219.892,-21.836,218.893)
C2: (215.652,-22.762,218.540)
C6: (216.628,-20.733,219.485)
C5: (217.856,-21.356,219.171)
C4: (217.849,-22.595,218.581)
P: (224.227,-21.041,217.066)
C4': (221.882,-24.160,216.880)
C2': (219.599,-24.152,216.307)
O2': (219.508,-25.508,215.918)
N1: (215.539,-21.532,219.125)
N2: (214.521,-23.418,218.263)
N3: (216.791,-23.349,218.242)
N7: (219.149,-20.877,219.366)
N9: (219.174,-22.889,218.395)
O5': (222.993,-22.026,216.934)
O3': (221.261,-23.907,214.557)
Image (generated by PyMOL):
PyMOL image
show in jmol