ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A508:A13

Extra

PDB:
ATOM 1 O3' A A 507 24.895 136.122 74.688 1.00 35.38 O
ATOM 2 P A A 508 25.157 136.845 76.100 1.00 37.26 P
ATOM 3 OP1 A A 508 24.017 136.518 76.990 1.00 36.20 O
ATOM 4 OP2 A A 508 25.490 138.265 75.833 1.00 37.35 O
ATOM 5 O5' A A 508 26.465 136.118 76.644 1.00 38.34 O
ATOM 6 C5' A A 508 26.514 134.681 76.787 1.00 38.06 C
ATOM 7 C4' A A 508 27.919 134.229 77.097 1.00 37.26 C
ATOM 8 O4' A A 508 28.737 134.389 75.910 1.00 37.63 O
ATOM 9 C3' A A 508 28.641 135.029 78.174 1.00 35.65 C
ATOM 10 O3' A A 508 28.314 134.531 79.456 1.00 32.49 O
ATOM 11 C2' A A 508 30.096 134.765 77.829 1.00 37.29 C
ATOM 12 O2' A A 508 30.500 133.488 78.275 1.00 40.00 O
ATOM 13 C1' A A 508 30.050 134.757 76.297 1.00 37.70 C
ATOM 14 N9 A A 508 30.372 136.050 75.699 1.00 37.31 N
ATOM 15 C8 A A 508 29.534 137.074 75.334 1.00 37.11 C
ATOM 16 N7 A A 508 30.156 138.090 74.785 1.00 38.18 N
ATOM 17 C5 A A 508 31.493 137.711 74.798 1.00 37.40 C
ATOM 18 C6 A A 508 32.668 138.342 74.348 1.00 36.73 C
ATOM 19 N6 A A 508 32.697 139.536 73.751 1.00 34.16 N
ATOM 20 N1 A A 508 33.832 137.689 74.526 1.00 37.03 N
ATOM 21 C2 A A 508 33.813 136.483 75.097 1.00 36.79 C
ATOM 22 N3 A A 508 32.778 135.781 75.549 1.00 36.60 N
ATOM 23 C4 A A 508 31.637 136.462 75.370 1.00 37.47 C
ATOM 24 P A A 509 28.346 135.496 80.743 1.00 34.09 P
ATOM 25 OP1 A A 509 27.754 134.708 81.862 1.00 33.07 O
ATOM 26 OP2 A A 509 27.781 136.825 80.393 1.00 32.30 O
ATOM 27 O5' A A 509 29.884 135.728 81.075 1.00 32.43 O
TER

ATOM 1 O3' U B 12 34.342 148.099 74.035 1.00 38.00 O
ATOM 2 P G B 13 34.861 147.634 72.586 1.00 37.84 P
ATOM 3 OP1 G B 13 36.257 148.087 72.437 1.00 39.32 O
ATOM 4 OP2 G B 13 33.830 148.070 71.603 1.00 39.82 O
ATOM 5 O5' G B 13 34.865 146.044 72.626 1.00 37.41 O
ATOM 6 C5' G B 13 35.875 145.291 73.342 1.00 35.82 C
ATOM 7 C4' G B 13 35.515 143.829 73.307 1.00 34.48 C
ATOM 8 O4' G B 13 34.225 143.639 73.947 1.00 34.27 O
ATOM 9 C3' G B 13 35.305 143.339 71.889 1.00 31.42 C
ATOM 10 O3' G B 13 36.552 142.986 71.350 1.00 29.80 O
ATOM 11 C2' G B 13 34.321 142.191 72.060 1.00 32.09 C
ATOM 12 O2' G B 13 34.885 140.981 72.495 1.00 31.41 O
ATOM 13 C1' G B 13 33.455 142.719 73.197 1.00 32.93 C
ATOM 14 N9 G B 13 32.277 143.406 72.693 1.00 32.91 N
ATOM 15 C8 G B 13 32.189 144.674 72.169 1.00 34.15 C
ATOM 16 N7 G B 13 30.976 145.003 71.838 1.00 34.91 N
ATOM 17 C5 G B 13 30.227 143.880 72.161 1.00 33.71 C
ATOM 18 C6 G B 13 28.849 143.641 72.051 1.00 33.41 C
ATOM 19 O6 G B 13 27.976 144.405 71.638 1.00 34.06 O
ATOM 20 N1 G B 13 28.515 142.360 72.489 1.00 33.24 N
ATOM 21 C2 G B 13 29.404 141.433 72.970 1.00 32.94 C
ATOM 22 N2 G B 13 28.896 140.248 73.344 1.00 32.37 N
ATOM 23 N3 G B 13 30.688 141.651 73.079 1.00 33.61 N
ATOM 24 C4 G B 13 31.027 142.887 72.667 1.00 33.34 C
ATOM 25 P G B 14 36.817 143.141 69.785 1.00 30.54 P
ATOM 26 OP1 G B 14 38.268 142.971 69.575 1.00 29.48 O
ATOM 27 OP2 G B 14 36.155 144.391 69.319 1.00 32.66 O
ATOM 28 O5' G B 14 36.075 141.878 69.169 1.00 28.50 O
TER

Atoms:
OP1: (24.017,136.518,76.990)
OP2: (25.490,138.265,75.833)
C3': (28.641,135.029,78.174)
C1': (30.050,134.757,76.297)
C5': (26.514,134.681,76.787)
O4': (28.737,134.389,75.910)
C8: (29.534,137.074,75.334)
O2': (30.500,133.488,78.275)
C6: (32.668,138.342,74.348)
C5: (31.493,137.711,74.798)
C4: (31.637,136.462,75.370)
P: (25.157,136.845,76.100)
C4': (27.919,134.229,77.097)
C2': (30.096,134.765,77.829)
C2: (33.813,136.483,75.097)
N1: (33.832,137.689,74.526)
N3: (32.778,135.781,75.549)
N6: (32.697,139.536,73.751)
N7: (30.156,138.090,74.785)
N9: (30.372,136.050,75.699)
O5': (26.465,136.118,76.644)
O3': (28.314,134.531,79.456)
OP1: (36.257,148.087,72.437)
OP2: (33.830,148.070,71.603)
C3': (35.305,143.339,71.889)
C1': (33.455,142.719,73.197)
C5': (35.875,145.291,73.342)
O6: (27.976,144.405,71.638)
O4': (34.225,143.639,73.947)
C8: (32.189,144.674,72.169)
C2: (29.404,141.433,72.970)
C6: (28.849,143.641,72.051)
C5: (30.227,143.880,72.161)
C4: (31.027,142.887,72.667)
P: (34.861,147.634,72.586)
C4': (35.515,143.829,73.307)
C2': (34.321,142.191,72.060)
O2': (34.885,140.981,72.495)
N1: (28.515,142.360,72.489)
N2: (28.896,140.248,73.344)
N3: (30.688,141.651,73.079)
N7: (30.976,145.003,71.838)
N9: (32.277,143.406,72.693)
O5': (34.865,146.044,72.626)
O3': (36.552,142.986,71.350)
Image (generated by PyMOL):
PyMOL image
show in jmol