ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0523:02010

Extra

PDB:
ATOM 1 O3' C A 522 25.151 130.897 109.564 1.00 41.34 O
ATOM 2 P G A 523 25.483 129.333 109.670 1.00 42.78 P
ATOM 3 OP1 G A 523 24.437 128.604 108.917 1.00 43.78 O
ATOM 4 OP2 G A 523 25.725 128.989 111.104 1.00 44.06 O
ATOM 5 O5' G A 523 26.868 129.197 108.898 1.00 40.82 O
ATOM 6 C5' G A 523 26.940 129.380 107.485 1.00 38.08 C
ATOM 7 C4' G A 523 28.150 128.672 106.934 1.00 38.86 C
ATOM 8 O4' G A 523 29.349 129.301 107.457 1.00 38.50 O
ATOM 9 C3' G A 523 28.291 127.185 107.266 1.00 39.29 C
ATOM 10 O3' G A 523 28.979 126.569 106.191 1.00 41.35 O
ATOM 11 C2' G A 523 29.296 127.196 108.409 1.00 39.37 C
ATOM 12 O2' G A 523 30.015 125.983 108.490 1.00 40.98 O
ATOM 13 C1' G A 523 30.219 128.297 107.913 1.00 37.93 C
ATOM 14 N9 G A 523 31.179 128.886 108.833 1.00 38.52 N
ATOM 15 C8 G A 523 31.078 129.070 110.191 1.00 38.73 C
ATOM 16 N7 G A 523 32.124 129.658 110.702 1.00 37.78 N
ATOM 17 C5 G A 523 32.961 129.866 109.616 1.00 37.64 C
ATOM 18 C6 G A 523 34.234 130.466 109.540 1.00 37.85 C
ATOM 19 O6 G A 523 34.909 130.958 110.449 1.00 39.41 O
ATOM 20 N1 G A 523 34.721 130.465 108.238 1.00 37.20 N
ATOM 21 C2 G A 523 34.064 129.951 107.151 1.00 38.65 C
ATOM 22 N2 G A 523 34.694 130.028 105.968 1.00 39.94 N
ATOM 23 N3 G A 523 32.877 129.396 107.212 1.00 38.59 N
ATOM 24 C4 G A 523 32.389 129.388 108.463 1.00 38.20 C
ATOM 25 P A A 524 28.164 125.868 105.014 1.00 42.89 P
ATOM 26 OP1 A A 524 27.034 126.770 104.656 1.00 43.25 O
ATOM 27 OP2 A A 524 27.893 124.459 105.408 1.00 41.49 O
ATOM 28 O5' A A 524 29.215 125.859 103.820 1.00 41.46 O
TER

ATOM 1 O3' U B2009 38.063 133.078 107.629 1.00 34.39 O
ATOM 2 P U B2010 38.271 131.740 106.761 1.00 34.29 P
ATOM 3 OP1 U B2010 38.909 132.146 105.488 1.00 34.92 O
ATOM 4 OP2 U B2010 37.008 130.987 106.732 1.00 37.70 O
ATOM 5 O5' U B2010 39.295 130.875 107.618 1.00 33.72 O
ATOM 6 C5' U B2010 40.437 131.494 108.209 1.00 34.57 C
ATOM 7 C4' U B2010 40.249 131.655 109.705 1.00 34.93 C
ATOM 8 O4' U B2010 38.838 131.666 110.061 1.00 34.84 O
ATOM 9 C3' U B2010 40.806 130.550 110.576 1.00 34.30 C
ATOM 10 O3' U B2010 42.202 130.699 110.736 1.00 35.86 O
ATOM 11 C2' U B2010 40.078 130.799 111.883 1.00 34.03 C
ATOM 12 O2' U B2010 40.601 131.922 112.550 1.00 34.91 O
ATOM 13 C1' U B2010 38.682 131.157 111.379 1.00 34.00 C
ATOM 14 N1 U B2010 37.769 129.999 111.366 1.00 33.38 N
ATOM 15 C2 U B2010 37.288 129.554 112.588 1.00 33.44 C
ATOM 16 O2 U B2010 37.607 130.056 113.646 1.00 35.73 O
ATOM 17 N3 U B2010 36.427 128.493 112.526 1.00 32.51 N
ATOM 18 C4 U B2010 36.010 127.834 111.397 1.00 33.74 C
ATOM 19 O4 U B2010 35.213 126.901 111.503 1.00 34.61 O
ATOM 20 C5 U B2010 36.559 128.336 110.176 1.00 33.63 C
ATOM 21 C6 U B2010 37.397 129.376 110.201 1.00 32.92 C
ATOM 22 P C B2011 43.096 129.416 111.078 1.00 38.25 P
ATOM 23 OP1 C B2011 44.519 129.832 111.006 1.00 38.57 O
ATOM 24 OP2 C B2011 42.627 128.254 110.274 1.00 37.21 O
ATOM 25 O5' C B2011 42.746 129.136 112.601 1.00 36.95 O
TER

Atoms:
OP1: (24.437,128.604,108.917)
OP2: (25.725,128.989,111.104)
C3': (28.291,127.185,107.266)
C1': (30.219,128.297,107.913)
C5': (26.940,129.380,107.485)
O6: (34.909,130.958,110.449)
O4': (29.349,129.301,107.457)
C8: (31.078,129.070,110.191)
C2: (34.064,129.951,107.151)
C6: (34.234,130.466,109.540)
C5: (32.961,129.866,109.616)
C4: (32.389,129.388,108.463)
P: (25.483,129.333,109.670)
C4': (28.150,128.672,106.934)
C2': (29.296,127.196,108.409)
O2': (30.015,125.983,108.490)
N1: (34.721,130.465,108.238)
N2: (34.694,130.028,105.968)
N3: (32.877,129.396,107.212)
N7: (32.124,129.658,110.702)
N9: (31.179,128.886,108.833)
O5': (26.868,129.197,108.898)
O3': (28.979,126.569,106.191)
C4: (36.010,127.834,111.397)
N3: (36.427,128.493,112.526)
OP1: (38.909,132.146,105.488)
OP2: (37.008,130.987,106.732)
C2: (37.288,129.554,112.588)
C1': (38.682,131.157,111.379)
C3': (40.806,130.550,110.576)
O5': (39.295,130.875,107.618)
O4': (38.838,131.666,110.061)
C5': (40.437,131.494,108.209)
P: (38.271,131.740,106.761)
C4': (40.249,131.655,109.705)
C2': (40.078,130.799,111.883)
O2': (40.601,131.922,112.550)
N1: (37.769,129.999,111.366)
O4: (35.213,126.901,111.503)
O2: (37.607,130.056,113.646)
C6: (37.397,129.376,110.201)
C5: (36.559,128.336,110.176)
O3': (42.202,130.699,110.736)
Image (generated by PyMOL):
PyMOL image
show in jmol