Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0554:0580
Extra
PDB:
ATOM 1 O3' A A 553 -0.778 91.289 97.852 1.00 52.40 O
ATOM 2 P A A 554 -0.857 90.754 99.365 1.00 53.21 P
ATOM 3 OP1 A A 554 -0.999 89.271 99.298 1.00 51.69 O
ATOM 4 OP2 A A 554 -1.865 91.565 100.095 1.00 52.94 O
ATOM 5 O5' A A 554 0.560 91.115 100.001 1.00 52.90 O
ATOM 6 C5' A A 554 1.777 90.473 99.553 1.00 49.30 C
ATOM 7 C4' A A 554 2.972 91.282 99.985 1.00 46.61 C
ATOM 8 O4' A A 554 2.857 92.618 99.428 1.00 47.22 O
ATOM 9 C3' A A 554 3.069 91.531 101.478 1.00 45.82 C
ATOM 10 O3' A A 554 3.664 90.438 102.147 1.00 45.42 O
ATOM 11 C2' A A 554 3.917 92.790 101.539 1.00 45.77 C
ATOM 12 O2' A A 554 5.287 92.531 101.312 1.00 46.38 O
ATOM 13 C1' A A 554 3.358 93.573 100.352 1.00 46.27 C
ATOM 14 N9 A A 554 2.265 94.469 100.729 1.00 45.84 N
ATOM 15 C8 A A 554 0.925 94.184 100.803 1.00 46.65 C
ATOM 16 N7 A A 554 0.190 95.195 101.201 1.00 46.99 N
ATOM 17 C5 A A 554 1.106 96.217 101.396 1.00 46.35 C
ATOM 18 C6 A A 554 0.961 97.553 101.817 1.00 45.25 C
ATOM 19 N6 A A 554 -0.208 98.111 102.127 1.00 44.20 N
ATOM 20 N1 A A 554 2.077 98.307 101.907 1.00 43.79 N
ATOM 21 C2 A A 554 3.251 97.751 101.590 1.00 45.22 C
ATOM 22 N3 A A 554 3.515 96.511 101.177 1.00 46.98 N
ATOM 23 C4 A A 554 2.387 95.785 101.102 1.00 46.41 C
ATOM 24 P U A 555 3.066 89.953 103.554 1.00 46.97 P
ATOM 25 OP1 U A 555 4.005 88.939 104.104 1.00 43.11 O
ATOM 26 OP2 U A 555 1.642 89.590 103.329 1.00 46.16 O
ATOM 27 O5' U A 555 3.104 91.259 104.473 1.00 42.45 O
TER
ATOM 1 O3' A B 579 -6.175 103.469 106.236 1.00 63.17 O
ATOM 2 P G B 580 -6.168 103.951 104.703 1.00 64.39 P
ATOM 3 OP1 G B 580 -5.863 105.408 104.714 1.00 62.92 O
ATOM 4 OP2 G B 580 -7.402 103.460 104.032 1.00 64.97 O
ATOM 5 O5' G B 580 -4.956 103.154 104.046 1.00 64.22 O
ATOM 6 C5' G B 580 -3.590 103.403 104.437 1.00 59.73 C
ATOM 7 C4' G B 580 -2.676 102.403 103.776 1.00 57.85 C
ATOM 8 O4' G B 580 -2.986 101.073 104.262 1.00 56.77 O
ATOM 9 C3' G B 580 -2.824 102.291 102.269 1.00 57.01 C
ATOM 10 O3' G B 580 -2.042 103.263 101.602 1.00 58.54 O
ATOM 11 C2' G B 580 -2.286 100.896 101.996 1.00 57.63 C
ATOM 12 O2' G B 580 -0.876 100.843 101.949 1.00 60.00 O
ATOM 13 C1' G B 580 -2.793 100.129 103.220 1.00 56.80 C
ATOM 14 N9 G B 580 -4.065 99.474 102.950 1.00 56.70 N
ATOM 15 C8 G B 580 -5.324 99.965 103.209 1.00 58.56 C
ATOM 16 N7 G B 580 -6.275 99.167 102.809 1.00 59.51 N
ATOM 17 C5 G B 580 -5.606 98.080 102.264 1.00 57.69 C
ATOM 18 C6 G B 580 -6.111 96.901 101.666 1.00 57.98 C
ATOM 19 O6 G B 580 -7.288 96.571 101.491 1.00 60.97 O
ATOM 20 N1 G B 580 -5.086 96.061 101.248 1.00 57.60 N
ATOM 21 C2 G B 580 -3.746 96.323 101.388 1.00 58.01 C
ATOM 22 N2 G B 580 -2.911 95.385 100.923 1.00 58.15 N
ATOM 23 N3 G B 580 -3.261 97.422 101.944 1.00 56.58 N
ATOM 24 C4 G B 580 -4.241 98.250 102.355 1.00 56.55 C
ATOM 25 P A B 581 -2.722 104.612 101.063 1.00 61.51 P
ATOM 26 OP1 A B 581 -2.700 105.594 102.183 1.00 59.67 O
ATOM 27 OP2 A B 581 -4.006 104.287 100.396 1.00 60.67 O
ATOM 28 O5' A B 581 -1.708 105.112 99.941 1.00 62.23 O
TER
ATOM 2 P A A 554 -0.857 90.754 99.365 1.00 53.21 P
ATOM 3 OP1 A A 554 -0.999 89.271 99.298 1.00 51.69 O
ATOM 4 OP2 A A 554 -1.865 91.565 100.095 1.00 52.94 O
ATOM 5 O5' A A 554 0.560 91.115 100.001 1.00 52.90 O
ATOM 6 C5' A A 554 1.777 90.473 99.553 1.00 49.30 C
ATOM 7 C4' A A 554 2.972 91.282 99.985 1.00 46.61 C
ATOM 8 O4' A A 554 2.857 92.618 99.428 1.00 47.22 O
ATOM 9 C3' A A 554 3.069 91.531 101.478 1.00 45.82 C
ATOM 10 O3' A A 554 3.664 90.438 102.147 1.00 45.42 O
ATOM 11 C2' A A 554 3.917 92.790 101.539 1.00 45.77 C
ATOM 12 O2' A A 554 5.287 92.531 101.312 1.00 46.38 O
ATOM 13 C1' A A 554 3.358 93.573 100.352 1.00 46.27 C
ATOM 14 N9 A A 554 2.265 94.469 100.729 1.00 45.84 N
ATOM 15 C8 A A 554 0.925 94.184 100.803 1.00 46.65 C
ATOM 16 N7 A A 554 0.190 95.195 101.201 1.00 46.99 N
ATOM 17 C5 A A 554 1.106 96.217 101.396 1.00 46.35 C
ATOM 18 C6 A A 554 0.961 97.553 101.817 1.00 45.25 C
ATOM 19 N6 A A 554 -0.208 98.111 102.127 1.00 44.20 N
ATOM 20 N1 A A 554 2.077 98.307 101.907 1.00 43.79 N
ATOM 21 C2 A A 554 3.251 97.751 101.590 1.00 45.22 C
ATOM 22 N3 A A 554 3.515 96.511 101.177 1.00 46.98 N
ATOM 23 C4 A A 554 2.387 95.785 101.102 1.00 46.41 C
ATOM 24 P U A 555 3.066 89.953 103.554 1.00 46.97 P
ATOM 25 OP1 U A 555 4.005 88.939 104.104 1.00 43.11 O
ATOM 26 OP2 U A 555 1.642 89.590 103.329 1.00 46.16 O
ATOM 27 O5' U A 555 3.104 91.259 104.473 1.00 42.45 O
TER
ATOM 1 O3' A B 579 -6.175 103.469 106.236 1.00 63.17 O
ATOM 2 P G B 580 -6.168 103.951 104.703 1.00 64.39 P
ATOM 3 OP1 G B 580 -5.863 105.408 104.714 1.00 62.92 O
ATOM 4 OP2 G B 580 -7.402 103.460 104.032 1.00 64.97 O
ATOM 5 O5' G B 580 -4.956 103.154 104.046 1.00 64.22 O
ATOM 6 C5' G B 580 -3.590 103.403 104.437 1.00 59.73 C
ATOM 7 C4' G B 580 -2.676 102.403 103.776 1.00 57.85 C
ATOM 8 O4' G B 580 -2.986 101.073 104.262 1.00 56.77 O
ATOM 9 C3' G B 580 -2.824 102.291 102.269 1.00 57.01 C
ATOM 10 O3' G B 580 -2.042 103.263 101.602 1.00 58.54 O
ATOM 11 C2' G B 580 -2.286 100.896 101.996 1.00 57.63 C
ATOM 12 O2' G B 580 -0.876 100.843 101.949 1.00 60.00 O
ATOM 13 C1' G B 580 -2.793 100.129 103.220 1.00 56.80 C
ATOM 14 N9 G B 580 -4.065 99.474 102.950 1.00 56.70 N
ATOM 15 C8 G B 580 -5.324 99.965 103.209 1.00 58.56 C
ATOM 16 N7 G B 580 -6.275 99.167 102.809 1.00 59.51 N
ATOM 17 C5 G B 580 -5.606 98.080 102.264 1.00 57.69 C
ATOM 18 C6 G B 580 -6.111 96.901 101.666 1.00 57.98 C
ATOM 19 O6 G B 580 -7.288 96.571 101.491 1.00 60.97 O
ATOM 20 N1 G B 580 -5.086 96.061 101.248 1.00 57.60 N
ATOM 21 C2 G B 580 -3.746 96.323 101.388 1.00 58.01 C
ATOM 22 N2 G B 580 -2.911 95.385 100.923 1.00 58.15 N
ATOM 23 N3 G B 580 -3.261 97.422 101.944 1.00 56.58 N
ATOM 24 C4 G B 580 -4.241 98.250 102.355 1.00 56.55 C
ATOM 25 P A B 581 -2.722 104.612 101.063 1.00 61.51 P
ATOM 26 OP1 A B 581 -2.700 105.594 102.183 1.00 59.67 O
ATOM 27 OP2 A B 581 -4.006 104.287 100.396 1.00 60.67 O
ATOM 28 O5' A B 581 -1.708 105.112 99.941 1.00 62.23 O
TER
Atoms:
OP1: (-0.999,89.271,99.298)
OP2: (-1.865,91.565,100.095)
C3': (3.069,91.531,101.478)
C1': (3.358,93.573,100.352)
C5': (1.777,90.473,99.553)
O4': (2.857,92.618,99.428)
C8: (0.925,94.184,100.803)
O2': (5.287,92.531,101.312)
C6: (0.961,97.553,101.817)
C5: (1.106,96.217,101.396)
C4: (2.387,95.785,101.102)
P: (-0.857,90.754,99.365)
C4': (2.972,91.282,99.985)
C2': (3.917,92.790,101.539)
C2: (3.251,97.751,101.590)
N1: (2.077,98.307,101.907)
N3: (3.515,96.511,101.177)
N6: (-0.208,98.111,102.127)
N7: (0.190,95.195,101.201)
N9: (2.265,94.469,100.729)
O5': (0.560,91.115,100.001)
O3': (3.664,90.438,102.147)
OP2: (-1.865,91.565,100.095)
C3': (3.069,91.531,101.478)
C1': (3.358,93.573,100.352)
C5': (1.777,90.473,99.553)
O4': (2.857,92.618,99.428)
C8: (0.925,94.184,100.803)
O2': (5.287,92.531,101.312)
C6: (0.961,97.553,101.817)
C5: (1.106,96.217,101.396)
C4: (2.387,95.785,101.102)
P: (-0.857,90.754,99.365)
C4': (2.972,91.282,99.985)
C2': (3.917,92.790,101.539)
C2: (3.251,97.751,101.590)
N1: (2.077,98.307,101.907)
N3: (3.515,96.511,101.177)
N6: (-0.208,98.111,102.127)
N7: (0.190,95.195,101.201)
N9: (2.265,94.469,100.729)
O5': (0.560,91.115,100.001)
O3': (3.664,90.438,102.147)
OP1: (-5.863,105.408,104.714)
OP2: (-7.402,103.460,104.032)
C3': (-2.824,102.291,102.269)
C1': (-2.793,100.129,103.220)
C5': (-3.590,103.403,104.437)
O6: (-7.288,96.571,101.491)
O4': (-2.986,101.073,104.262)
C8: (-5.324,99.965,103.209)
C2: (-3.746,96.323,101.388)
C6: (-6.111,96.901,101.666)
C5: (-5.606,98.080,102.264)
C4: (-4.241,98.250,102.355)
P: (-6.168,103.951,104.703)
C4': (-2.676,102.403,103.776)
C2': (-2.286,100.896,101.996)
O2': (-0.876,100.843,101.949)
N1: (-5.086,96.061,101.248)
N2: (-2.911,95.385,100.923)
N3: (-3.261,97.422,101.944)
N7: (-6.275,99.167,102.809)
N9: (-4.065,99.474,102.950)
O5': (-4.956,103.154,104.046)
O3': (-2.042,103.263,101.602)
OP2: (-7.402,103.460,104.032)
C3': (-2.824,102.291,102.269)
C1': (-2.793,100.129,103.220)
C5': (-3.590,103.403,104.437)
O6: (-7.288,96.571,101.491)
O4': (-2.986,101.073,104.262)
C8: (-5.324,99.965,103.209)
C2: (-3.746,96.323,101.388)
C6: (-6.111,96.901,101.666)
C5: (-5.606,98.080,102.264)
C4: (-4.241,98.250,102.355)
P: (-6.168,103.951,104.703)
C4': (-2.676,102.403,103.776)
C2': (-2.286,100.896,101.996)
O2': (-0.876,100.843,101.949)
N1: (-5.086,96.061,101.248)
N2: (-2.911,95.385,100.923)
N3: (-3.261,97.422,101.944)
N7: (-6.275,99.167,102.809)
N9: (-4.065,99.474,102.950)
O5': (-4.956,103.154,104.046)
O3': (-2.042,103.263,101.602)
Image (generated by PyMOL):