ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01941:01973

Extra

PDB:
ATOM 1 O3' A A1940 92.626 128.745 128.990 1.00 39.17 O
ATOM 2 P G A1941 93.798 128.607 127.918 1.00 40.88 P
ATOM 3 OP1 G A1941 93.933 127.148 127.673 1.00 41.54 O
ATOM 4 OP2 G A1941 94.975 129.387 128.377 1.00 45.45 O
ATOM 5 O5' G A1941 93.239 129.341 126.619 1.00 40.63 O
ATOM 6 C5' G A1941 92.055 128.879 125.958 1.00 38.79 C
ATOM 7 C4' G A1941 92.252 128.905 124.466 1.00 38.15 C
ATOM 8 O4' G A1941 92.228 130.277 123.983 1.00 37.59 O
ATOM 9 C3' G A1941 93.572 128.312 123.983 1.00 39.57 C
ATOM 10 O3' G A1941 93.355 127.626 122.764 1.00 40.82 O
ATOM 11 C2' G A1941 94.418 129.551 123.723 1.00 38.76 C
ATOM 12 O2' G A1941 95.448 129.354 122.779 1.00 38.21 O
ATOM 13 C1' G A1941 93.362 130.501 123.174 1.00 38.71 C
ATOM 14 N9 G A1941 93.717 131.916 123.214 1.00 41.17 N
ATOM 15 C8 G A1941 94.184 132.640 124.287 1.00 40.94 C
ATOM 16 N7 G A1941 94.425 133.891 123.993 1.00 42.31 N
ATOM 17 C5 G A1941 94.103 133.998 122.646 1.00 40.39 C
ATOM 18 C6 G A1941 94.174 135.113 121.763 1.00 41.29 C
ATOM 19 O6 G A1941 94.576 136.263 121.992 1.00 39.61 O
ATOM 20 N1 G A1941 93.724 134.783 120.490 1.00 41.41 N
ATOM 21 C2 G A1941 93.280 133.545 120.107 1.00 40.48 C
ATOM 22 N2 G A1941 92.868 133.437 118.839 1.00 40.71 N
ATOM 23 N3 G A1941 93.236 132.496 120.906 1.00 39.44 N
ATOM 24 C4 G A1941 93.655 132.792 122.153 1.00 40.27 C
ATOM 25 P U A1942 94.107 126.237 122.496 1.00 43.60 P
ATOM 26 OP1 U A1942 93.729 125.275 123.562 1.00 41.79 O
ATOM 27 OP2 U A1942 95.535 126.522 122.241 1.00 42.21 O
ATOM 28 O5' U A1942 93.448 125.730 121.146 1.00 45.49 O
TER

ATOM 1 O3' C B1972 94.885 135.834 116.693 1.00 45.70 O
ATOM 2 P U B1973 94.354 137.198 117.370 1.00 45.28 P
ATOM 3 OP1 U B1973 93.459 136.827 118.497 1.00 47.22 O
ATOM 4 OP2 U B1973 93.860 138.092 116.302 1.00 47.77 O
ATOM 5 O5' U B1973 95.662 137.899 117.943 1.00 48.70 O
ATOM 6 C5' U B1973 96.451 137.285 118.979 1.00 47.42 C
ATOM 7 C4' U B1973 97.648 138.150 119.300 1.00 48.99 C
ATOM 8 O4' U B1973 98.494 138.261 118.122 1.00 49.25 O
ATOM 9 C3' U B1973 97.356 139.602 119.658 1.00 49.30 C
ATOM 10 O3' U B1973 96.931 139.779 121.003 1.00 49.54 O
ATOM 11 C2' U B1973 98.699 140.256 119.384 1.00 49.89 C
ATOM 12 O2' U B1973 99.649 139.958 120.385 1.00 53.32 O
ATOM 13 C1' U B1973 99.106 139.547 118.093 1.00 50.71 C
ATOM 14 N1 U B1973 98.631 140.285 116.907 1.00 51.74 N
ATOM 15 C2 U B1973 99.358 141.406 116.508 1.00 52.58 C
ATOM 16 O2 U B1973 100.369 141.790 117.084 1.00 53.11 O
ATOM 17 N3 U B1973 98.859 142.057 115.406 1.00 51.91 N
ATOM 18 C4 U B1973 97.744 141.717 114.675 1.00 53.16 C
ATOM 19 O4 U B1973 97.432 142.401 113.697 1.00 54.16 O
ATOM 20 C5 U B1973 97.044 140.561 115.151 1.00 51.26 C
ATOM 21 C6 U B1973 97.499 139.901 116.219 1.00 50.06 C
ATOM 22 P U B1974 95.970 141.017 121.380 1.00 49.27 P
ATOM 23 OP1 U B1974 95.428 140.746 122.733 1.00 52.30 O
ATOM 24 OP2 U B1974 95.040 141.271 120.269 1.00 50.09 O
ATOM 25 O5' U B1974 96.950 142.273 121.457 1.00 52.00 O
TER

Atoms:
OP1: (93.933,127.148,127.673)
OP2: (94.975,129.387,128.377)
C3': (93.572,128.312,123.983)
C1': (93.362,130.501,123.174)
C5': (92.055,128.879,125.958)
O6: (94.576,136.263,121.992)
O4': (92.228,130.277,123.983)
C8: (94.184,132.640,124.287)
C2: (93.280,133.545,120.107)
C6: (94.174,135.113,121.763)
C5: (94.103,133.998,122.646)
C4: (93.655,132.792,122.153)
P: (93.798,128.607,127.918)
C4': (92.252,128.905,124.466)
C2': (94.418,129.551,123.723)
O2': (95.448,129.354,122.779)
N1: (93.724,134.783,120.490)
N2: (92.868,133.437,118.839)
N3: (93.236,132.496,120.906)
N7: (94.425,133.891,123.993)
N9: (93.717,131.916,123.214)
O5': (93.239,129.341,126.619)
O3': (93.355,127.626,122.764)
C4: (97.744,141.717,114.675)
N3: (98.859,142.057,115.406)
OP1: (93.459,136.827,118.497)
OP2: (93.860,138.092,116.302)
C2: (99.358,141.406,116.508)
C1': (99.106,139.547,118.093)
C3': (97.356,139.602,119.658)
O5': (95.662,137.899,117.943)
O4': (98.494,138.261,118.122)
C5': (96.451,137.285,118.979)
P: (94.354,137.198,117.370)
C4': (97.648,138.150,119.300)
C2': (98.699,140.256,119.384)
O2': (99.649,139.958,120.385)
N1: (98.631,140.285,116.907)
O4: (97.432,142.401,113.697)
O2: (100.369,141.790,117.084)
C6: (97.499,139.901,116.219)
C5: (97.044,140.561,115.151)
O3': (96.931,139.779,121.003)
Image (generated by PyMOL):
PyMOL image
show in jmol