Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y62:Y10
Extra
PDB:
ATOM 1 O3' U A 61 4.875 14.428 52.498 1.00 33.04 O
ATOM 2 P G A 62 5.040 14.960 53.999 1.00 35.32 P
ATOM 3 OP1 G A 62 4.569 13.886 54.901 1.00 36.12 O
ATOM 4 OP2 G A 62 4.434 16.304 54.080 1.00 35.22 O
ATOM 5 O5' G A 62 6.624 15.124 54.168 1.00 37.88 O
ATOM 6 C5' G A 62 7.168 15.521 55.425 1.00 41.08 C
ATOM 7 C4' G A 62 8.461 14.786 55.737 1.00 43.16 C
ATOM 8 O4' G A 62 8.169 13.460 56.252 1.00 44.76 O
ATOM 9 C3' G A 62 9.370 14.504 54.551 1.00 43.71 C
ATOM 10 O3' G A 62 10.168 15.621 54.192 1.00 42.82 O
ATOM 11 C2' G A 62 10.240 13.400 55.131 1.00 44.80 C
ATOM 12 O2' G A 62 11.198 13.899 56.045 1.00 45.69 O
ATOM 13 C1' G A 62 9.193 12.562 55.855 1.00 45.56 C
ATOM 14 N9 G A 62 8.629 11.521 54.999 1.00 46.35 N
ATOM 15 C8 G A 62 7.342 11.439 54.523 1.00 46.76 C
ATOM 16 N7 G A 62 7.131 10.394 53.771 1.00 46.95 N
ATOM 17 C5 G A 62 8.358 9.743 53.741 1.00 47.06 C
ATOM 18 C6 G A 62 8.742 8.549 53.084 1.00 47.07 C
ATOM 19 O6 G A 62 8.046 7.809 52.376 1.00 46.86 O
ATOM 20 N1 G A 62 10.081 8.237 53.313 1.00 47.27 N
ATOM 21 C2 G A 62 10.941 8.988 54.081 1.00 47.10 C
ATOM 22 N2 G A 62 12.199 8.535 54.191 1.00 46.71 N
ATOM 23 N3 G A 62 10.591 10.107 54.703 1.00 47.03 N
ATOM 24 C4 G A 62 9.291 10.425 54.489 1.00 46.76 C
ATOM 25 P C A 63 11.139 15.439 52.932 1.00 41.92 P
ATOM 26 OP1 C A 63 10.520 14.419 52.056 1.00 42.32 O
ATOM 27 OP2 C A 63 12.518 15.251 53.434 1.00 42.56 O
ATOM 28 O5' C A 63 11.071 16.849 52.188 1.00 39.81 O
TER
ATOM 1 O3' G B 9 13.483 5.625 54.263 1.00 33.31 O
ATOM 2 P U B 10 12.475 4.790 53.343 1.00 33.81 P
ATOM 3 OP1 U B 10 11.123 5.367 53.515 1.00 34.80 O
ATOM 4 OP2 U B 10 12.702 3.354 53.608 1.00 34.10 O
ATOM 5 O5' U B 10 12.988 5.099 51.860 1.00 34.28 O
ATOM 6 C5' U B 10 12.709 6.348 51.237 1.00 33.56 C
ATOM 7 C4' U B 10 13.580 6.528 50.007 1.00 33.91 C
ATOM 8 O4' U B 10 14.972 6.346 50.365 1.00 34.21 O
ATOM 9 C3' U B 10 13.324 5.523 48.893 1.00 34.35 C
ATOM 10 O3' U B 10 12.326 6.030 48.020 1.00 34.63 O
ATOM 11 C2' U B 10 14.670 5.454 48.178 1.00 34.11 C
ATOM 12 O2' U B 10 14.741 6.370 47.103 1.00 34.08 O
ATOM 13 C1' U B 10 15.684 5.819 49.263 1.00 34.22 C
ATOM 14 N1 U B 10 16.490 4.644 49.709 1.00 34.18 N
ATOM 15 C2 U B 10 17.785 4.504 49.254 1.00 34.22 C
ATOM 16 O2 U B 10 18.322 5.306 48.510 1.00 34.60 O
ATOM 17 N3 U B 10 18.437 3.383 49.705 1.00 33.95 N
ATOM 18 C4 U B 10 17.930 2.409 50.545 1.00 34.11 C
ATOM 19 O4 U B 10 18.635 1.460 50.867 1.00 34.28 O
ATOM 20 C5 U B 10 16.573 2.623 50.974 1.00 34.28 C
ATOM 21 C6 U B 10 15.918 3.707 50.546 1.00 34.23 C
ATOM 22 P G B 11 11.066 5.142 47.600 1.00 35.46 P
ATOM 23 OP1 G B 11 10.949 4.018 48.558 1.00 34.93 O
ATOM 24 OP2 G B 11 11.159 4.875 46.146 1.00 35.33 O
ATOM 25 O5' G B 11 9.848 6.157 47.819 1.00 34.79 O
TER
ATOM 2 P G A 62 5.040 14.960 53.999 1.00 35.32 P
ATOM 3 OP1 G A 62 4.569 13.886 54.901 1.00 36.12 O
ATOM 4 OP2 G A 62 4.434 16.304 54.080 1.00 35.22 O
ATOM 5 O5' G A 62 6.624 15.124 54.168 1.00 37.88 O
ATOM 6 C5' G A 62 7.168 15.521 55.425 1.00 41.08 C
ATOM 7 C4' G A 62 8.461 14.786 55.737 1.00 43.16 C
ATOM 8 O4' G A 62 8.169 13.460 56.252 1.00 44.76 O
ATOM 9 C3' G A 62 9.370 14.504 54.551 1.00 43.71 C
ATOM 10 O3' G A 62 10.168 15.621 54.192 1.00 42.82 O
ATOM 11 C2' G A 62 10.240 13.400 55.131 1.00 44.80 C
ATOM 12 O2' G A 62 11.198 13.899 56.045 1.00 45.69 O
ATOM 13 C1' G A 62 9.193 12.562 55.855 1.00 45.56 C
ATOM 14 N9 G A 62 8.629 11.521 54.999 1.00 46.35 N
ATOM 15 C8 G A 62 7.342 11.439 54.523 1.00 46.76 C
ATOM 16 N7 G A 62 7.131 10.394 53.771 1.00 46.95 N
ATOM 17 C5 G A 62 8.358 9.743 53.741 1.00 47.06 C
ATOM 18 C6 G A 62 8.742 8.549 53.084 1.00 47.07 C
ATOM 19 O6 G A 62 8.046 7.809 52.376 1.00 46.86 O
ATOM 20 N1 G A 62 10.081 8.237 53.313 1.00 47.27 N
ATOM 21 C2 G A 62 10.941 8.988 54.081 1.00 47.10 C
ATOM 22 N2 G A 62 12.199 8.535 54.191 1.00 46.71 N
ATOM 23 N3 G A 62 10.591 10.107 54.703 1.00 47.03 N
ATOM 24 C4 G A 62 9.291 10.425 54.489 1.00 46.76 C
ATOM 25 P C A 63 11.139 15.439 52.932 1.00 41.92 P
ATOM 26 OP1 C A 63 10.520 14.419 52.056 1.00 42.32 O
ATOM 27 OP2 C A 63 12.518 15.251 53.434 1.00 42.56 O
ATOM 28 O5' C A 63 11.071 16.849 52.188 1.00 39.81 O
TER
ATOM 1 O3' G B 9 13.483 5.625 54.263 1.00 33.31 O
ATOM 2 P U B 10 12.475 4.790 53.343 1.00 33.81 P
ATOM 3 OP1 U B 10 11.123 5.367 53.515 1.00 34.80 O
ATOM 4 OP2 U B 10 12.702 3.354 53.608 1.00 34.10 O
ATOM 5 O5' U B 10 12.988 5.099 51.860 1.00 34.28 O
ATOM 6 C5' U B 10 12.709 6.348 51.237 1.00 33.56 C
ATOM 7 C4' U B 10 13.580 6.528 50.007 1.00 33.91 C
ATOM 8 O4' U B 10 14.972 6.346 50.365 1.00 34.21 O
ATOM 9 C3' U B 10 13.324 5.523 48.893 1.00 34.35 C
ATOM 10 O3' U B 10 12.326 6.030 48.020 1.00 34.63 O
ATOM 11 C2' U B 10 14.670 5.454 48.178 1.00 34.11 C
ATOM 12 O2' U B 10 14.741 6.370 47.103 1.00 34.08 O
ATOM 13 C1' U B 10 15.684 5.819 49.263 1.00 34.22 C
ATOM 14 N1 U B 10 16.490 4.644 49.709 1.00 34.18 N
ATOM 15 C2 U B 10 17.785 4.504 49.254 1.00 34.22 C
ATOM 16 O2 U B 10 18.322 5.306 48.510 1.00 34.60 O
ATOM 17 N3 U B 10 18.437 3.383 49.705 1.00 33.95 N
ATOM 18 C4 U B 10 17.930 2.409 50.545 1.00 34.11 C
ATOM 19 O4 U B 10 18.635 1.460 50.867 1.00 34.28 O
ATOM 20 C5 U B 10 16.573 2.623 50.974 1.00 34.28 C
ATOM 21 C6 U B 10 15.918 3.707 50.546 1.00 34.23 C
ATOM 22 P G B 11 11.066 5.142 47.600 1.00 35.46 P
ATOM 23 OP1 G B 11 10.949 4.018 48.558 1.00 34.93 O
ATOM 24 OP2 G B 11 11.159 4.875 46.146 1.00 35.33 O
ATOM 25 O5' G B 11 9.848 6.157 47.819 1.00 34.79 O
TER
Atoms:
OP1: (4.569,13.886,54.901)
OP2: (4.434,16.304,54.080)
C3': (9.370,14.504,54.551)
C1': (9.193,12.562,55.855)
C5': (7.168,15.521,55.425)
O6: (8.046,7.809,52.376)
O4': (8.169,13.460,56.252)
C8: (7.342,11.439,54.523)
C2: (10.941,8.988,54.081)
C6: (8.742,8.549,53.084)
C5: (8.358,9.743,53.741)
C4: (9.291,10.425,54.489)
P: (5.040,14.960,53.999)
C4': (8.461,14.786,55.737)
C2': (10.240,13.400,55.131)
O2': (11.198,13.899,56.045)
N1: (10.081,8.237,53.313)
N2: (12.199,8.535,54.191)
N3: (10.591,10.107,54.703)
N7: (7.131,10.394,53.771)
N9: (8.629,11.521,54.999)
O5': (6.624,15.124,54.168)
O3': (10.168,15.621,54.192)
OP2: (4.434,16.304,54.080)
C3': (9.370,14.504,54.551)
C1': (9.193,12.562,55.855)
C5': (7.168,15.521,55.425)
O6: (8.046,7.809,52.376)
O4': (8.169,13.460,56.252)
C8: (7.342,11.439,54.523)
C2: (10.941,8.988,54.081)
C6: (8.742,8.549,53.084)
C5: (8.358,9.743,53.741)
C4: (9.291,10.425,54.489)
P: (5.040,14.960,53.999)
C4': (8.461,14.786,55.737)
C2': (10.240,13.400,55.131)
O2': (11.198,13.899,56.045)
N1: (10.081,8.237,53.313)
N2: (12.199,8.535,54.191)
N3: (10.591,10.107,54.703)
N7: (7.131,10.394,53.771)
N9: (8.629,11.521,54.999)
O5': (6.624,15.124,54.168)
O3': (10.168,15.621,54.192)
C4: (17.930,2.409,50.545)
N3: (18.437,3.383,49.705)
OP1: (11.123,5.367,53.515)
OP2: (12.702,3.354,53.608)
C2: (17.785,4.504,49.254)
C1': (15.684,5.819,49.263)
C3': (13.324,5.523,48.893)
O5': (12.988,5.099,51.860)
O4': (14.972,6.346,50.365)
C5': (12.709,6.348,51.237)
P: (12.475,4.790,53.343)
C4': (13.580,6.528,50.007)
C2': (14.670,5.454,48.178)
O2': (14.741,6.370,47.103)
N1: (16.490,4.644,49.709)
O4: (18.635,1.460,50.867)
O2: (18.322,5.306,48.510)
C6: (15.918,3.707,50.546)
C5: (16.573,2.623,50.974)
O3': (12.326,6.030,48.020)
N3: (18.437,3.383,49.705)
OP1: (11.123,5.367,53.515)
OP2: (12.702,3.354,53.608)
C2: (17.785,4.504,49.254)
C1': (15.684,5.819,49.263)
C3': (13.324,5.523,48.893)
O5': (12.988,5.099,51.860)
O4': (14.972,6.346,50.365)
C5': (12.709,6.348,51.237)
P: (12.475,4.790,53.343)
C4': (13.580,6.528,50.007)
C2': (14.670,5.454,48.178)
O2': (14.741,6.370,47.103)
N1: (16.490,4.644,49.709)
O4: (18.635,1.460,50.867)
O2: (18.322,5.306,48.510)
C6: (15.918,3.707,50.546)
C5: (16.573,2.623,50.974)
O3': (12.326,6.030,48.020)
Image (generated by PyMOL):