Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2560:A2490
Extra
PDB:
ATOM 1 O3' C A2559 -27.173 107.643 173.646 1.00 45.24 O
ATOM 2 P G A2560 -27.051 109.148 173.082 1.00 24.67 P
ATOM 3 OP1 G A2560 -26.518 110.033 174.164 1.00 16.12 O
ATOM 4 OP2 G A2560 -28.338 109.466 172.386 1.00 43.51 O
ATOM 5 O5' G A2560 -25.974 108.984 171.909 1.00 24.64 O
ATOM 6 C5' G A2560 -24.731 108.386 172.191 1.00 30.74 C
ATOM 7 C4' G A2560 -23.652 109.187 171.499 1.00 28.71 C
ATOM 8 O4' G A2560 -24.049 109.385 170.120 1.00 29.81 O
ATOM 9 C3' G A2560 -23.494 110.607 172.022 1.00 26.41 C
ATOM 10 O3' G A2560 -22.701 110.642 173.207 1.00 20.01 O
ATOM 11 C2' G A2560 -22.870 111.332 170.821 1.00 30.06 C
ATOM 12 O2' G A2560 -21.466 111.264 170.722 1.00 34.33 O
ATOM 13 C1' G A2560 -23.456 110.579 169.631 1.00 34.29 C
ATOM 14 N9 G A2560 -24.457 111.340 168.895 1.00 28.83 N
ATOM 15 C8 G A2560 -24.425 111.644 167.563 1.00 28.23 C
ATOM 16 N7 G A2560 -25.453 112.329 167.165 1.00 25.17 N
ATOM 17 C5 G A2560 -26.208 112.498 168.313 1.00 22.87 C
ATOM 18 C6 G A2560 -27.443 113.161 168.490 1.00 25.46 C
ATOM 19 O6 G A2560 -28.114 113.744 167.631 1.00 39.34 O
ATOM 20 N1 G A2560 -27.886 113.097 169.809 1.00 21.54 N
ATOM 21 C2 G A2560 -27.210 112.460 170.825 1.00 28.78 C
ATOM 22 N2 G A2560 -27.780 112.495 172.043 1.00 32.46 N
ATOM 23 N3 G A2560 -26.051 111.829 170.660 1.00 37.50 N
ATOM 24 C4 G A2560 -25.611 111.891 169.385 1.00 27.31 C
ATOM 25 P A A2561 -23.067 111.592 174.461 1.00 28.75 P
ATOM 26 OP1 A A2561 -24.286 111.098 175.161 1.00 31.49 O
ATOM 27 OP2 A A2561 -23.005 112.966 173.918 1.00 53.09 O
ATOM 28 O5' A A2561 -21.796 111.456 175.436 1.00 34.27 O
TER
ATOM 1 O3' G B2489 -30.896 116.305 170.598 1.00 49.96 O
ATOM 2 P U B2490 -31.551 114.851 170.365 1.00 62.50 P
ATOM 3 OP1 U B2490 -32.931 114.885 170.914 1.00 64.64 O
ATOM 4 OP2 U B2490 -30.606 113.808 170.838 1.00 71.84 O
ATOM 5 O5' U B2490 -31.610 114.791 168.766 1.00 45.64 O
ATOM 6 C5' U B2490 -32.083 113.661 168.081 1.00 49.06 C
ATOM 7 C4' U B2490 -32.466 114.147 166.702 1.00 57.29 C
ATOM 8 O4' U B2490 -31.703 115.334 166.416 1.00 57.71 O
ATOM 9 C3' U B2490 -32.118 113.220 165.552 1.00 50.75 C
ATOM 10 O3' U B2490 -33.150 112.260 165.379 1.00 48.69 O
ATOM 11 C2' U B2490 -32.070 114.167 164.366 1.00 52.15 C
ATOM 12 O2' U B2490 -33.345 114.333 163.793 1.00 59.12 O
ATOM 13 C1' U B2490 -31.646 115.480 165.008 1.00 63.03 C
ATOM 14 N1 U B2490 -30.283 115.896 164.589 1.00 67.60 N
ATOM 15 C2 U B2490 -30.099 117.203 164.185 1.00 70.87 C
ATOM 16 O2 U B2490 -30.991 118.039 164.161 1.00 70.68 O
ATOM 17 N3 U B2490 -28.821 117.511 163.807 1.00 78.29 N
ATOM 18 C4 U B2490 -27.735 116.666 163.791 1.00 79.76 C
ATOM 19 O4 U B2490 -26.650 117.107 163.421 1.00 78.56 O
ATOM 20 C5 U B2490 -28.010 115.315 164.220 1.00 81.70 C
ATOM 21 C6 U B2490 -29.250 114.982 164.592 1.00 73.35 C
ATOM 22 P C B2491 -32.819 110.722 165.685 1.00 37.71 P
ATOM 23 OP1 C B2491 -33.700 110.296 166.799 1.00 37.19 O
ATOM 24 OP2 C B2491 -31.341 110.617 165.796 1.00 48.38 O
ATOM 25 O5' C B2491 -33.176 109.935 164.342 1.00 36.12 O
TER
ATOM 2 P G A2560 -27.051 109.148 173.082 1.00 24.67 P
ATOM 3 OP1 G A2560 -26.518 110.033 174.164 1.00 16.12 O
ATOM 4 OP2 G A2560 -28.338 109.466 172.386 1.00 43.51 O
ATOM 5 O5' G A2560 -25.974 108.984 171.909 1.00 24.64 O
ATOM 6 C5' G A2560 -24.731 108.386 172.191 1.00 30.74 C
ATOM 7 C4' G A2560 -23.652 109.187 171.499 1.00 28.71 C
ATOM 8 O4' G A2560 -24.049 109.385 170.120 1.00 29.81 O
ATOM 9 C3' G A2560 -23.494 110.607 172.022 1.00 26.41 C
ATOM 10 O3' G A2560 -22.701 110.642 173.207 1.00 20.01 O
ATOM 11 C2' G A2560 -22.870 111.332 170.821 1.00 30.06 C
ATOM 12 O2' G A2560 -21.466 111.264 170.722 1.00 34.33 O
ATOM 13 C1' G A2560 -23.456 110.579 169.631 1.00 34.29 C
ATOM 14 N9 G A2560 -24.457 111.340 168.895 1.00 28.83 N
ATOM 15 C8 G A2560 -24.425 111.644 167.563 1.00 28.23 C
ATOM 16 N7 G A2560 -25.453 112.329 167.165 1.00 25.17 N
ATOM 17 C5 G A2560 -26.208 112.498 168.313 1.00 22.87 C
ATOM 18 C6 G A2560 -27.443 113.161 168.490 1.00 25.46 C
ATOM 19 O6 G A2560 -28.114 113.744 167.631 1.00 39.34 O
ATOM 20 N1 G A2560 -27.886 113.097 169.809 1.00 21.54 N
ATOM 21 C2 G A2560 -27.210 112.460 170.825 1.00 28.78 C
ATOM 22 N2 G A2560 -27.780 112.495 172.043 1.00 32.46 N
ATOM 23 N3 G A2560 -26.051 111.829 170.660 1.00 37.50 N
ATOM 24 C4 G A2560 -25.611 111.891 169.385 1.00 27.31 C
ATOM 25 P A A2561 -23.067 111.592 174.461 1.00 28.75 P
ATOM 26 OP1 A A2561 -24.286 111.098 175.161 1.00 31.49 O
ATOM 27 OP2 A A2561 -23.005 112.966 173.918 1.00 53.09 O
ATOM 28 O5' A A2561 -21.796 111.456 175.436 1.00 34.27 O
TER
ATOM 1 O3' G B2489 -30.896 116.305 170.598 1.00 49.96 O
ATOM 2 P U B2490 -31.551 114.851 170.365 1.00 62.50 P
ATOM 3 OP1 U B2490 -32.931 114.885 170.914 1.00 64.64 O
ATOM 4 OP2 U B2490 -30.606 113.808 170.838 1.00 71.84 O
ATOM 5 O5' U B2490 -31.610 114.791 168.766 1.00 45.64 O
ATOM 6 C5' U B2490 -32.083 113.661 168.081 1.00 49.06 C
ATOM 7 C4' U B2490 -32.466 114.147 166.702 1.00 57.29 C
ATOM 8 O4' U B2490 -31.703 115.334 166.416 1.00 57.71 O
ATOM 9 C3' U B2490 -32.118 113.220 165.552 1.00 50.75 C
ATOM 10 O3' U B2490 -33.150 112.260 165.379 1.00 48.69 O
ATOM 11 C2' U B2490 -32.070 114.167 164.366 1.00 52.15 C
ATOM 12 O2' U B2490 -33.345 114.333 163.793 1.00 59.12 O
ATOM 13 C1' U B2490 -31.646 115.480 165.008 1.00 63.03 C
ATOM 14 N1 U B2490 -30.283 115.896 164.589 1.00 67.60 N
ATOM 15 C2 U B2490 -30.099 117.203 164.185 1.00 70.87 C
ATOM 16 O2 U B2490 -30.991 118.039 164.161 1.00 70.68 O
ATOM 17 N3 U B2490 -28.821 117.511 163.807 1.00 78.29 N
ATOM 18 C4 U B2490 -27.735 116.666 163.791 1.00 79.76 C
ATOM 19 O4 U B2490 -26.650 117.107 163.421 1.00 78.56 O
ATOM 20 C5 U B2490 -28.010 115.315 164.220 1.00 81.70 C
ATOM 21 C6 U B2490 -29.250 114.982 164.592 1.00 73.35 C
ATOM 22 P C B2491 -32.819 110.722 165.685 1.00 37.71 P
ATOM 23 OP1 C B2491 -33.700 110.296 166.799 1.00 37.19 O
ATOM 24 OP2 C B2491 -31.341 110.617 165.796 1.00 48.38 O
ATOM 25 O5' C B2491 -33.176 109.935 164.342 1.00 36.12 O
TER
Atoms:
OP1: (-26.518,110.033,174.164)
OP2: (-28.338,109.466,172.386)
C3': (-23.494,110.607,172.022)
C1': (-23.456,110.579,169.631)
C5': (-24.731,108.386,172.191)
O6: (-28.114,113.744,167.631)
O4': (-24.049,109.385,170.120)
C8: (-24.425,111.644,167.563)
C2: (-27.210,112.460,170.825)
C6: (-27.443,113.161,168.490)
C5: (-26.208,112.498,168.313)
C4: (-25.611,111.891,169.385)
P: (-27.051,109.148,173.082)
C4': (-23.652,109.187,171.499)
C2': (-22.870,111.332,170.821)
O2': (-21.466,111.264,170.722)
N1: (-27.886,113.097,169.809)
N2: (-27.780,112.495,172.043)
N3: (-26.051,111.829,170.660)
N7: (-25.453,112.329,167.165)
N9: (-24.457,111.340,168.895)
O5': (-25.974,108.984,171.909)
O3': (-22.701,110.642,173.207)
OP2: (-28.338,109.466,172.386)
C3': (-23.494,110.607,172.022)
C1': (-23.456,110.579,169.631)
C5': (-24.731,108.386,172.191)
O6: (-28.114,113.744,167.631)
O4': (-24.049,109.385,170.120)
C8: (-24.425,111.644,167.563)
C2: (-27.210,112.460,170.825)
C6: (-27.443,113.161,168.490)
C5: (-26.208,112.498,168.313)
C4: (-25.611,111.891,169.385)
P: (-27.051,109.148,173.082)
C4': (-23.652,109.187,171.499)
C2': (-22.870,111.332,170.821)
O2': (-21.466,111.264,170.722)
N1: (-27.886,113.097,169.809)
N2: (-27.780,112.495,172.043)
N3: (-26.051,111.829,170.660)
N7: (-25.453,112.329,167.165)
N9: (-24.457,111.340,168.895)
O5': (-25.974,108.984,171.909)
O3': (-22.701,110.642,173.207)
C4: (-27.735,116.666,163.791)
N3: (-28.821,117.511,163.807)
OP1: (-32.931,114.885,170.914)
OP2: (-30.606,113.808,170.838)
C2: (-30.099,117.203,164.185)
C1': (-31.646,115.480,165.008)
C3': (-32.118,113.220,165.552)
O5': (-31.610,114.791,168.766)
O4': (-31.703,115.334,166.416)
C5': (-32.083,113.661,168.081)
P: (-31.551,114.851,170.365)
C4': (-32.466,114.147,166.702)
C2': (-32.070,114.167,164.366)
O2': (-33.345,114.333,163.793)
N1: (-30.283,115.896,164.589)
O4: (-26.650,117.107,163.421)
O2: (-30.991,118.039,164.161)
C6: (-29.250,114.982,164.592)
C5: (-28.010,115.315,164.220)
O3': (-33.150,112.260,165.379)
N3: (-28.821,117.511,163.807)
OP1: (-32.931,114.885,170.914)
OP2: (-30.606,113.808,170.838)
C2: (-30.099,117.203,164.185)
C1': (-31.646,115.480,165.008)
C3': (-32.118,113.220,165.552)
O5': (-31.610,114.791,168.766)
O4': (-31.703,115.334,166.416)
C5': (-32.083,113.661,168.081)
P: (-31.551,114.851,170.365)
C4': (-32.466,114.147,166.702)
C2': (-32.070,114.167,164.366)
O2': (-33.345,114.333,163.793)
N1: (-30.283,115.896,164.589)
O4: (-26.650,117.107,163.421)
O2: (-30.991,118.039,164.161)
C6: (-29.250,114.982,164.592)
C5: (-28.010,115.315,164.220)
O3': (-33.150,112.260,165.379)
Image (generated by PyMOL):