Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0463:0453
Extra
PDB:
ATOM 1 O3' C A 462 60.553 134.869 60.479 1.00 32.55 O
ATOM 2 P G A 463 59.065 134.672 59.888 1.00 34.25 P
ATOM 3 OP1 G A 463 58.347 133.714 60.765 1.00 35.06 O
ATOM 4 OP2 G A 463 59.144 134.399 58.433 1.00 34.42 O
ATOM 5 O5' G A 463 58.384 136.101 60.068 1.00 33.76 O
ATOM 6 C5' G A 463 57.904 136.548 61.346 1.00 32.67 C
ATOM 7 C4' G A 463 57.182 137.866 61.196 1.00 34.33 C
ATOM 8 O4' G A 463 58.113 138.913 60.815 1.00 35.60 O
ATOM 9 C3' G A 463 56.147 137.921 60.093 1.00 35.59 C
ATOM 10 O3' G A 463 54.933 137.295 60.451 1.00 37.73 O
ATOM 11 C2' G A 463 56.014 139.418 59.871 1.00 36.36 C
ATOM 12 O2' G A 463 55.299 140.069 60.899 1.00 36.70 O
ATOM 13 C1' G A 463 57.476 139.839 59.943 1.00 35.47 C
ATOM 14 N9 G A 463 58.097 139.719 58.628 1.00 36.80 N
ATOM 15 C8 G A 463 58.807 138.641 58.149 1.00 37.54 C
ATOM 16 N7 G A 463 59.223 138.803 56.923 1.00 37.30 N
ATOM 17 C5 G A 463 58.763 140.064 56.568 1.00 36.54 C
ATOM 18 C6 G A 463 58.897 140.772 55.351 1.00 36.02 C
ATOM 19 O6 G A 463 59.435 140.397 54.297 1.00 37.34 O
ATOM 20 N1 G A 463 58.306 142.027 55.422 1.00 34.98 N
ATOM 21 C2 G A 463 57.640 142.525 56.516 1.00 37.49 C
ATOM 22 N2 G A 463 57.136 143.763 56.386 1.00 37.77 N
ATOM 23 N3 G A 463 57.483 141.861 57.655 1.00 37.18 N
ATOM 24 C4 G A 463 58.073 140.648 57.612 1.00 36.98 C
ATOM 25 P A A 464 53.908 136.860 59.302 1.00 37.76 P
ATOM 26 OP1 A A 464 52.981 135.894 59.929 1.00 37.75 O
ATOM 27 OP2 A A 464 54.649 136.475 58.071 1.00 36.97 O
ATOM 28 O5' A A 464 53.149 138.219 58.991 1.00 37.21 O
TER
ATOM 1 O3' G B 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 2 P U B 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 3 OP1 U B 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 4 OP2 U B 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 5 O5' U B 453 56.787 146.090 52.855 1.00 48.07 O
ATOM 6 C5' U B 453 56.129 146.923 51.895 1.00 45.59 C
ATOM 7 C4' U B 453 54.907 147.545 52.514 1.00 46.18 C
ATOM 8 O4' U B 453 53.866 146.548 52.625 1.00 45.69 O
ATOM 9 C3' U B 453 55.111 148.047 53.933 1.00 46.17 C
ATOM 10 O3' U B 453 55.711 149.340 53.973 1.00 46.68 O
ATOM 11 C2' U B 453 53.704 147.982 54.511 1.00 44.62 C
ATOM 12 O2' U B 453 52.898 149.071 54.115 1.00 42.62 O
ATOM 13 C1' U B 453 53.181 146.696 53.862 1.00 43.81 C
ATOM 14 N1 U B 453 53.414 145.471 54.646 1.00 41.07 N
ATOM 15 C2 U B 453 52.725 145.298 55.836 1.00 40.68 C
ATOM 16 O2 U B 453 51.956 146.124 56.284 1.00 42.47 O
ATOM 17 N3 U B 453 52.986 144.121 56.489 1.00 39.15 N
ATOM 18 C4 U B 453 53.857 143.128 56.093 1.00 40.57 C
ATOM 19 O4 U B 453 54.003 142.128 56.795 1.00 41.00 O
ATOM 20 C5 U B 453 54.536 143.386 54.865 1.00 41.52 C
ATOM 21 C6 U B 453 54.297 144.516 54.202 1.00 40.99 C
ATOM 22 P A B 454 56.834 149.651 55.075 1.00 45.82 P
ATOM 23 OP1 A B 454 57.267 151.053 54.913 1.00 46.54 O
ATOM 24 OP2 A B 454 57.844 148.565 55.043 1.00 46.24 O
ATOM 25 O5' A B 454 56.029 149.553 56.441 1.00 45.17 O
TER
ATOM 2 P G A 463 59.065 134.672 59.888 1.00 34.25 P
ATOM 3 OP1 G A 463 58.347 133.714 60.765 1.00 35.06 O
ATOM 4 OP2 G A 463 59.144 134.399 58.433 1.00 34.42 O
ATOM 5 O5' G A 463 58.384 136.101 60.068 1.00 33.76 O
ATOM 6 C5' G A 463 57.904 136.548 61.346 1.00 32.67 C
ATOM 7 C4' G A 463 57.182 137.866 61.196 1.00 34.33 C
ATOM 8 O4' G A 463 58.113 138.913 60.815 1.00 35.60 O
ATOM 9 C3' G A 463 56.147 137.921 60.093 1.00 35.59 C
ATOM 10 O3' G A 463 54.933 137.295 60.451 1.00 37.73 O
ATOM 11 C2' G A 463 56.014 139.418 59.871 1.00 36.36 C
ATOM 12 O2' G A 463 55.299 140.069 60.899 1.00 36.70 O
ATOM 13 C1' G A 463 57.476 139.839 59.943 1.00 35.47 C
ATOM 14 N9 G A 463 58.097 139.719 58.628 1.00 36.80 N
ATOM 15 C8 G A 463 58.807 138.641 58.149 1.00 37.54 C
ATOM 16 N7 G A 463 59.223 138.803 56.923 1.00 37.30 N
ATOM 17 C5 G A 463 58.763 140.064 56.568 1.00 36.54 C
ATOM 18 C6 G A 463 58.897 140.772 55.351 1.00 36.02 C
ATOM 19 O6 G A 463 59.435 140.397 54.297 1.00 37.34 O
ATOM 20 N1 G A 463 58.306 142.027 55.422 1.00 34.98 N
ATOM 21 C2 G A 463 57.640 142.525 56.516 1.00 37.49 C
ATOM 22 N2 G A 463 57.136 143.763 56.386 1.00 37.77 N
ATOM 23 N3 G A 463 57.483 141.861 57.655 1.00 37.18 N
ATOM 24 C4 G A 463 58.073 140.648 57.612 1.00 36.98 C
ATOM 25 P A A 464 53.908 136.860 59.302 1.00 37.76 P
ATOM 26 OP1 A A 464 52.981 135.894 59.929 1.00 37.75 O
ATOM 27 OP2 A A 464 54.649 136.475 58.071 1.00 36.97 O
ATOM 28 O5' A A 464 53.149 138.219 58.991 1.00 37.21 O
TER
ATOM 1 O3' G B 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 2 P U B 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 3 OP1 U B 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 4 OP2 U B 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 5 O5' U B 453 56.787 146.090 52.855 1.00 48.07 O
ATOM 6 C5' U B 453 56.129 146.923 51.895 1.00 45.59 C
ATOM 7 C4' U B 453 54.907 147.545 52.514 1.00 46.18 C
ATOM 8 O4' U B 453 53.866 146.548 52.625 1.00 45.69 O
ATOM 9 C3' U B 453 55.111 148.047 53.933 1.00 46.17 C
ATOM 10 O3' U B 453 55.711 149.340 53.973 1.00 46.68 O
ATOM 11 C2' U B 453 53.704 147.982 54.511 1.00 44.62 C
ATOM 12 O2' U B 453 52.898 149.071 54.115 1.00 42.62 O
ATOM 13 C1' U B 453 53.181 146.696 53.862 1.00 43.81 C
ATOM 14 N1 U B 453 53.414 145.471 54.646 1.00 41.07 N
ATOM 15 C2 U B 453 52.725 145.298 55.836 1.00 40.68 C
ATOM 16 O2 U B 453 51.956 146.124 56.284 1.00 42.47 O
ATOM 17 N3 U B 453 52.986 144.121 56.489 1.00 39.15 N
ATOM 18 C4 U B 453 53.857 143.128 56.093 1.00 40.57 C
ATOM 19 O4 U B 453 54.003 142.128 56.795 1.00 41.00 O
ATOM 20 C5 U B 453 54.536 143.386 54.865 1.00 41.52 C
ATOM 21 C6 U B 453 54.297 144.516 54.202 1.00 40.99 C
ATOM 22 P A B 454 56.834 149.651 55.075 1.00 45.82 P
ATOM 23 OP1 A B 454 57.267 151.053 54.913 1.00 46.54 O
ATOM 24 OP2 A B 454 57.844 148.565 55.043 1.00 46.24 O
ATOM 25 O5' A B 454 56.029 149.553 56.441 1.00 45.17 O
TER
Atoms:
OP1: (58.347,133.714,60.765)
OP2: (59.144,134.399,58.433)
C3': (56.147,137.921,60.093)
C1': (57.476,139.839,59.943)
C5': (57.904,136.548,61.346)
O6: (59.435,140.397,54.297)
O4': (58.113,138.913,60.815)
C8: (58.807,138.641,58.149)
C2: (57.640,142.525,56.516)
C6: (58.897,140.772,55.351)
C5: (58.763,140.064,56.568)
C4: (58.073,140.648,57.612)
P: (59.065,134.672,59.888)
C4': (57.182,137.866,61.196)
C2': (56.014,139.418,59.871)
O2': (55.299,140.069,60.899)
N1: (58.306,142.027,55.422)
N2: (57.136,143.763,56.386)
N3: (57.483,141.861,57.655)
N7: (59.223,138.803,56.923)
N9: (58.097,139.719,58.628)
O5': (58.384,136.101,60.068)
O3': (54.933,137.295,60.451)
OP2: (59.144,134.399,58.433)
C3': (56.147,137.921,60.093)
C1': (57.476,139.839,59.943)
C5': (57.904,136.548,61.346)
O6: (59.435,140.397,54.297)
O4': (58.113,138.913,60.815)
C8: (58.807,138.641,58.149)
C2: (57.640,142.525,56.516)
C6: (58.897,140.772,55.351)
C5: (58.763,140.064,56.568)
C4: (58.073,140.648,57.612)
P: (59.065,134.672,59.888)
C4': (57.182,137.866,61.196)
C2': (56.014,139.418,59.871)
O2': (55.299,140.069,60.899)
N1: (58.306,142.027,55.422)
N2: (57.136,143.763,56.386)
N3: (57.483,141.861,57.655)
N7: (59.223,138.803,56.923)
N9: (58.097,139.719,58.628)
O5': (58.384,136.101,60.068)
O3': (54.933,137.295,60.451)
C4: (53.857,143.128,56.093)
N3: (52.986,144.121,56.489)
OP1: (58.551,145.378,51.237)
OP2: (58.429,144.374,53.610)
C2: (52.725,145.298,55.836)
C1': (53.181,146.696,53.862)
C3': (55.111,148.047,53.933)
O5': (56.787,146.090,52.855)
O4': (53.866,146.548,52.625)
C5': (56.129,146.923,51.895)
P: (57.740,144.903,52.392)
C4': (54.907,147.545,52.514)
C2': (53.704,147.982,54.511)
O2': (52.898,149.071,54.115)
N1: (53.414,145.471,54.646)
O4: (54.003,142.128,56.795)
O2: (51.956,146.124,56.284)
C6: (54.297,144.516,54.202)
C5: (54.536,143.386,54.865)
O3': (55.711,149.340,53.973)
N3: (52.986,144.121,56.489)
OP1: (58.551,145.378,51.237)
OP2: (58.429,144.374,53.610)
C2: (52.725,145.298,55.836)
C1': (53.181,146.696,53.862)
C3': (55.111,148.047,53.933)
O5': (56.787,146.090,52.855)
O4': (53.866,146.548,52.625)
C5': (56.129,146.923,51.895)
P: (57.740,144.903,52.392)
C4': (54.907,147.545,52.514)
C2': (53.704,147.982,54.511)
O2': (52.898,149.071,54.115)
N1: (53.414,145.471,54.646)
O4: (54.003,142.128,56.795)
O2: (51.956,146.124,56.284)
C6: (54.297,144.516,54.202)
C5: (54.536,143.386,54.865)
O3': (55.711,149.340,53.973)
Image (generated by PyMOL):