Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A253:A242
Extra
PDB:
ATOM 1 O3' C A 252 -81.011 -57.452 56.673 1.00 0.01 O
ATOM 2 P G A 253 -80.816 -58.455 57.889 1.00 0.01 P
ATOM 3 OP1 G A 253 -79.394 -58.388 58.296 1.00 0.01 O
ATOM 4 OP2 G A 253 -81.377 -59.755 57.479 1.00 0.01 O
ATOM 5 O5' G A 253 -81.732 -57.796 58.979 1.00 0.01 O
ATOM 6 C5' G A 253 -81.593 -58.119 60.322 1.00 0.01 C
ATOM 7 C4' G A 253 -82.835 -57.791 61.068 1.00 0.01 C
ATOM 8 O4' G A 253 -83.900 -57.502 60.141 1.00 0.01 O
ATOM 9 C3' G A 253 -83.381 -58.906 61.907 1.00 0.01 C
ATOM 10 O3' G A 253 -82.735 -58.990 63.139 1.00 0.01 O
ATOM 11 C2' G A 253 -84.830 -58.523 62.028 1.00 0.01 C
ATOM 12 O2' G A 253 -84.973 -57.444 62.911 1.00 0.01 O
ATOM 13 C1' G A 253 -85.108 -58.035 60.632 1.00 0.01 C
ATOM 14 N9 G A 253 -85.517 -59.148 59.771 1.00 0.01 N
ATOM 15 C8 G A 253 -84.811 -59.745 58.781 1.00 0.01 C
ATOM 16 N7 G A 253 -85.422 -60.744 58.223 1.00 0.01 N
ATOM 17 C5 G A 253 -86.607 -60.817 58.905 1.00 0.01 C
ATOM 18 C6 G A 253 -87.676 -61.717 58.735 1.00 0.01 C
ATOM 19 O6 G A 253 -87.771 -62.637 57.928 1.00 0.01 O
ATOM 20 N1 G A 253 -88.694 -61.447 59.626 1.00 0.01 N
ATOM 21 C2 G A 253 -88.655 -60.450 60.561 1.00 0.01 C
ATOM 22 N2 G A 253 -89.717 -60.356 61.361 1.00 0.01 N
ATOM 23 N3 G A 253 -87.657 -59.605 60.729 1.00 0.01 N
ATOM 24 C4 G A 253 -86.672 -59.847 59.866 1.00 0.01 C
ATOM 25 P A A 254 -81.677 -60.128 63.427 1.00 0.01 P
ATOM 26 OP1 A A 254 -80.436 -59.466 63.757 1.00 0.01 O
ATOM 27 OP2 A A 254 -81.712 -61.055 62.309 1.00 0.01 O
ATOM 28 O5' A A 254 -82.264 -60.799 64.720 1.00 0.01 O
TER
ATOM 1 O3' G B 241 -90.589 -65.151 60.772 1.00 0.01 O
ATOM 2 P U B 242 -91.708 -64.169 60.212 1.00 0.00 P
ATOM 3 OP1 U B 242 -92.539 -64.942 59.313 1.00 0.01 O
ATOM 4 OP2 U B 242 -91.038 -62.983 59.711 1.00 0.01 O
ATOM 5 O5' U B 242 -92.518 -63.792 61.503 1.00 0.01 O
ATOM 6 C5' U B 242 -93.342 -64.740 62.145 1.00 0.01 C
ATOM 7 C4' U B 242 -93.463 -64.439 63.610 1.00 0.01 C
ATOM 8 O4' U B 242 -92.235 -64.783 64.273 1.00 0.01 O
ATOM 9 C3' U B 242 -93.721 -62.984 63.957 1.00 0.01 C
ATOM 10 O3' U B 242 -95.096 -62.708 64.008 1.00 0.01 O
ATOM 11 C2' U B 242 -93.033 -62.797 65.293 1.00 0.01 C
ATOM 12 O2' U B 242 -93.910 -63.116 66.347 1.00 0.01 O
ATOM 13 C1' U B 242 -91.935 -63.851 65.265 1.00 0.01 C
ATOM 14 N1 U B 242 -90.620 -63.304 64.983 1.00 0.01 N
ATOM 15 C2 U B 242 -90.004 -62.652 65.978 1.00 0.01 C
ATOM 16 O2 U B 242 -90.536 -62.474 67.038 1.00 0.01 O
ATOM 17 N3 U B 242 -88.771 -62.209 65.678 1.00 0.01 N
ATOM 18 C4 U B 242 -88.108 -62.381 64.498 1.00 0.01 C
ATOM 19 O4 U B 242 -86.980 -61.931 64.370 1.00 0.00 O
ATOM 20 C5 U B 242 -88.806 -63.098 63.512 1.00 0.01 C
ATOM 21 C6 U B 242 -90.014 -63.545 63.791 1.00 0.01 C
ATOM 22 P A B 243 -95.646 -61.281 63.589 1.00 0.01 P
ATOM 23 OP1 A B 243 -97.089 -61.281 63.839 1.00 0.01 O
ATOM 24 OP2 A B 243 -95.166 -60.994 62.216 1.00 0.01 O
ATOM 25 O5' A B 243 -94.924 -60.337 64.629 1.00 0.01 O
TER
ATOM 2 P G A 253 -80.816 -58.455 57.889 1.00 0.01 P
ATOM 3 OP1 G A 253 -79.394 -58.388 58.296 1.00 0.01 O
ATOM 4 OP2 G A 253 -81.377 -59.755 57.479 1.00 0.01 O
ATOM 5 O5' G A 253 -81.732 -57.796 58.979 1.00 0.01 O
ATOM 6 C5' G A 253 -81.593 -58.119 60.322 1.00 0.01 C
ATOM 7 C4' G A 253 -82.835 -57.791 61.068 1.00 0.01 C
ATOM 8 O4' G A 253 -83.900 -57.502 60.141 1.00 0.01 O
ATOM 9 C3' G A 253 -83.381 -58.906 61.907 1.00 0.01 C
ATOM 10 O3' G A 253 -82.735 -58.990 63.139 1.00 0.01 O
ATOM 11 C2' G A 253 -84.830 -58.523 62.028 1.00 0.01 C
ATOM 12 O2' G A 253 -84.973 -57.444 62.911 1.00 0.01 O
ATOM 13 C1' G A 253 -85.108 -58.035 60.632 1.00 0.01 C
ATOM 14 N9 G A 253 -85.517 -59.148 59.771 1.00 0.01 N
ATOM 15 C8 G A 253 -84.811 -59.745 58.781 1.00 0.01 C
ATOM 16 N7 G A 253 -85.422 -60.744 58.223 1.00 0.01 N
ATOM 17 C5 G A 253 -86.607 -60.817 58.905 1.00 0.01 C
ATOM 18 C6 G A 253 -87.676 -61.717 58.735 1.00 0.01 C
ATOM 19 O6 G A 253 -87.771 -62.637 57.928 1.00 0.01 O
ATOM 20 N1 G A 253 -88.694 -61.447 59.626 1.00 0.01 N
ATOM 21 C2 G A 253 -88.655 -60.450 60.561 1.00 0.01 C
ATOM 22 N2 G A 253 -89.717 -60.356 61.361 1.00 0.01 N
ATOM 23 N3 G A 253 -87.657 -59.605 60.729 1.00 0.01 N
ATOM 24 C4 G A 253 -86.672 -59.847 59.866 1.00 0.01 C
ATOM 25 P A A 254 -81.677 -60.128 63.427 1.00 0.01 P
ATOM 26 OP1 A A 254 -80.436 -59.466 63.757 1.00 0.01 O
ATOM 27 OP2 A A 254 -81.712 -61.055 62.309 1.00 0.01 O
ATOM 28 O5' A A 254 -82.264 -60.799 64.720 1.00 0.01 O
TER
ATOM 1 O3' G B 241 -90.589 -65.151 60.772 1.00 0.01 O
ATOM 2 P U B 242 -91.708 -64.169 60.212 1.00 0.00 P
ATOM 3 OP1 U B 242 -92.539 -64.942 59.313 1.00 0.01 O
ATOM 4 OP2 U B 242 -91.038 -62.983 59.711 1.00 0.01 O
ATOM 5 O5' U B 242 -92.518 -63.792 61.503 1.00 0.01 O
ATOM 6 C5' U B 242 -93.342 -64.740 62.145 1.00 0.01 C
ATOM 7 C4' U B 242 -93.463 -64.439 63.610 1.00 0.01 C
ATOM 8 O4' U B 242 -92.235 -64.783 64.273 1.00 0.01 O
ATOM 9 C3' U B 242 -93.721 -62.984 63.957 1.00 0.01 C
ATOM 10 O3' U B 242 -95.096 -62.708 64.008 1.00 0.01 O
ATOM 11 C2' U B 242 -93.033 -62.797 65.293 1.00 0.01 C
ATOM 12 O2' U B 242 -93.910 -63.116 66.347 1.00 0.01 O
ATOM 13 C1' U B 242 -91.935 -63.851 65.265 1.00 0.01 C
ATOM 14 N1 U B 242 -90.620 -63.304 64.983 1.00 0.01 N
ATOM 15 C2 U B 242 -90.004 -62.652 65.978 1.00 0.01 C
ATOM 16 O2 U B 242 -90.536 -62.474 67.038 1.00 0.01 O
ATOM 17 N3 U B 242 -88.771 -62.209 65.678 1.00 0.01 N
ATOM 18 C4 U B 242 -88.108 -62.381 64.498 1.00 0.01 C
ATOM 19 O4 U B 242 -86.980 -61.931 64.370 1.00 0.00 O
ATOM 20 C5 U B 242 -88.806 -63.098 63.512 1.00 0.01 C
ATOM 21 C6 U B 242 -90.014 -63.545 63.791 1.00 0.01 C
ATOM 22 P A B 243 -95.646 -61.281 63.589 1.00 0.01 P
ATOM 23 OP1 A B 243 -97.089 -61.281 63.839 1.00 0.01 O
ATOM 24 OP2 A B 243 -95.166 -60.994 62.216 1.00 0.01 O
ATOM 25 O5' A B 243 -94.924 -60.337 64.629 1.00 0.01 O
TER
Atoms:
OP1: (-79.394,-58.388,58.296)
OP2: (-81.377,-59.755,57.479)
C3': (-83.381,-58.906,61.907)
C1': (-85.108,-58.035,60.632)
C5': (-81.593,-58.119,60.322)
O6: (-87.771,-62.637,57.928)
O4': (-83.900,-57.502,60.141)
C8: (-84.811,-59.745,58.781)
C2: (-88.655,-60.450,60.561)
C6: (-87.676,-61.717,58.735)
C5: (-86.607,-60.817,58.905)
C4: (-86.672,-59.847,59.866)
P: (-80.816,-58.455,57.889)
C4': (-82.835,-57.791,61.068)
C2': (-84.830,-58.523,62.028)
O2': (-84.973,-57.444,62.911)
N1: (-88.694,-61.447,59.626)
N2: (-89.717,-60.356,61.361)
N3: (-87.657,-59.605,60.729)
N7: (-85.422,-60.744,58.223)
N9: (-85.517,-59.148,59.771)
O5': (-81.732,-57.796,58.979)
O3': (-82.735,-58.990,63.139)
OP2: (-81.377,-59.755,57.479)
C3': (-83.381,-58.906,61.907)
C1': (-85.108,-58.035,60.632)
C5': (-81.593,-58.119,60.322)
O6: (-87.771,-62.637,57.928)
O4': (-83.900,-57.502,60.141)
C8: (-84.811,-59.745,58.781)
C2: (-88.655,-60.450,60.561)
C6: (-87.676,-61.717,58.735)
C5: (-86.607,-60.817,58.905)
C4: (-86.672,-59.847,59.866)
P: (-80.816,-58.455,57.889)
C4': (-82.835,-57.791,61.068)
C2': (-84.830,-58.523,62.028)
O2': (-84.973,-57.444,62.911)
N1: (-88.694,-61.447,59.626)
N2: (-89.717,-60.356,61.361)
N3: (-87.657,-59.605,60.729)
N7: (-85.422,-60.744,58.223)
N9: (-85.517,-59.148,59.771)
O5': (-81.732,-57.796,58.979)
O3': (-82.735,-58.990,63.139)
C4: (-88.108,-62.381,64.498)
N3: (-88.771,-62.209,65.678)
OP1: (-92.539,-64.942,59.313)
OP2: (-91.038,-62.983,59.711)
C2: (-90.004,-62.652,65.978)
C1': (-91.935,-63.851,65.265)
C3': (-93.721,-62.984,63.957)
O5': (-92.518,-63.792,61.503)
O4': (-92.235,-64.783,64.273)
C5': (-93.342,-64.740,62.145)
P: (-91.708,-64.169,60.212)
C4': (-93.463,-64.439,63.610)
C2': (-93.033,-62.797,65.293)
O2': (-93.910,-63.116,66.347)
N1: (-90.620,-63.304,64.983)
O4: (-86.980,-61.931,64.370)
O2: (-90.536,-62.474,67.038)
C6: (-90.014,-63.545,63.791)
C5: (-88.806,-63.098,63.512)
O3': (-95.096,-62.708,64.008)
N3: (-88.771,-62.209,65.678)
OP1: (-92.539,-64.942,59.313)
OP2: (-91.038,-62.983,59.711)
C2: (-90.004,-62.652,65.978)
C1': (-91.935,-63.851,65.265)
C3': (-93.721,-62.984,63.957)
O5': (-92.518,-63.792,61.503)
O4': (-92.235,-64.783,64.273)
C5': (-93.342,-64.740,62.145)
P: (-91.708,-64.169,60.212)
C4': (-93.463,-64.439,63.610)
C2': (-93.033,-62.797,65.293)
O2': (-93.910,-63.116,66.347)
N1: (-90.620,-63.304,64.983)
O4: (-86.980,-61.931,64.370)
O2: (-90.536,-62.474,67.038)
C6: (-90.014,-63.545,63.791)
C5: (-88.806,-63.098,63.512)
O3': (-95.096,-62.708,64.008)
Image (generated by PyMOL):