Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5559:5544
Extra
PDB:
ATOM 1 O3' A A 558 70.231 -17.910 263.179 1.00 50.83 O
ATOM 2 P G A 559 71.014 -17.216 261.979 1.00 50.46 P
ATOM 3 OP1 G A 559 72.167 -18.087 261.681 1.00 50.14 O
ATOM 4 OP2 G A 559 71.245 -15.808 262.359 1.00 50.23 O
ATOM 5 O5' G A 559 69.993 -17.248 260.794 1.00 50.77 O
ATOM 6 C5' G A 559 69.862 -18.365 259.989 1.00 50.93 C
ATOM 7 C4' G A 559 70.967 -18.457 259.006 1.00 50.49 C
ATOM 8 O4' G A 559 71.229 -19.850 258.775 1.00 50.58 O
ATOM 9 C3' G A 559 70.702 -17.823 257.639 1.00 50.45 C
ATOM 10 O3' G A 559 71.196 -16.478 257.573 1.00 50.09 O
ATOM 11 C2' G A 559 71.374 -18.776 256.650 1.00 50.30 C
ATOM 12 O2' G A 559 72.665 -18.311 256.287 1.00 49.76 O
ATOM 13 C1' G A 559 71.508 -20.093 257.444 1.00 50.46 C
ATOM 14 N9 G A 559 70.608 -21.159 256.949 1.00 50.93 N
ATOM 15 C8 G A 559 70.977 -22.466 256.749 1.00 50.98 C
ATOM 16 N7 G A 559 70.042 -23.227 256.249 1.00 51.43 N
ATOM 17 C5 G A 559 68.997 -22.359 256.075 1.00 51.68 C
ATOM 18 C6 G A 559 67.728 -22.629 255.554 1.00 52.18 C
ATOM 19 O6 G A 559 67.309 -23.720 255.143 1.00 52.51 O
ATOM 20 N1 G A 559 66.933 -21.503 255.609 1.00 52.31 N
ATOM 21 C2 G A 559 67.353 -20.292 256.066 1.00 51.99 C
ATOM 22 N2 G A 559 66.481 -19.281 256.036 1.00 52.17 N
ATOM 23 N3 G A 559 68.542 -20.034 256.521 1.00 51.51 N
ATOM 24 C4 G A 559 69.309 -21.101 256.513 1.00 51.38 C
ATOM 25 P G A 560 70.922 -15.494 256.303 1.00 51.09 P
ATOM 26 OP1 G A 560 69.610 -14.854 256.513 1.00 51.50 O
ATOM 27 OP2 G A 560 71.176 -16.265 255.044 1.00 51.06 O
ATOM 28 O5' G A 560 72.043 -14.408 256.461 1.00 50.56 O
TER
ATOM 1 O3' C B 543 61.911 -20.820 253.653 1.00 58.58 O
ATOM 2 P U B 544 63.120 -21.001 254.690 1.00 69.92 P
ATOM 3 OP1 U B 544 62.630 -21.716 255.868 1.00 70.25 O
ATOM 4 OP2 U B 544 63.746 -19.686 254.876 1.00 69.48 O
ATOM 5 O5' U B 544 64.043 -21.927 253.868 1.00 69.68 O
ATOM 6 C5' U B 544 64.556 -23.067 254.460 1.00 69.66 C
ATOM 7 C4' U B 544 63.651 -24.278 254.387 1.00 70.21 C
ATOM 8 O4' U B 544 63.390 -24.607 252.997 1.00 70.35 O
ATOM 9 C3' U B 544 64.364 -25.472 254.948 1.00 70.14 C
ATOM 10 O3' U B 544 63.463 -26.447 255.361 1.00 70.67 O
ATOM 11 C2' U B 544 65.196 -25.957 253.769 1.00 69.88 C
ATOM 12 O2' U B 544 65.581 -27.324 253.829 1.00 69.97 O
ATOM 13 C1' U B 544 64.294 -25.622 252.556 1.00 70.16 C
ATOM 14 N1 U B 544 65.090 -25.073 251.397 1.00 69.76 N
ATOM 15 C2 U B 544 65.659 -25.908 250.428 1.00 69.68 C
ATOM 16 O2 U B 544 65.506 -27.110 250.359 1.00 69.95 O
ATOM 17 N3 U B 544 66.419 -25.317 249.452 1.00 69.30 N
ATOM 18 C4 U B 544 66.706 -23.985 249.326 1.00 68.96 C
ATOM 19 O4 U B 544 67.423 -23.638 248.394 1.00 68.65 O
ATOM 20 C5 U B 544 66.139 -23.157 250.346 1.00 69.04 C
ATOM 21 C6 U B 544 65.394 -23.726 251.304 1.00 69.41 C
ATOM 22 P G B 545 63.728 -27.192 256.739 1.00 61.17 P
ATOM 23 OP1 G B 545 63.598 -28.650 256.473 1.00 61.48 O
ATOM 24 OP2 G B 545 62.839 -26.560 257.740 1.00 61.44 O
ATOM 25 O5' G B 545 65.230 -26.826 257.068 1.00 60.53 O
TER
ATOM 2 P G A 559 71.014 -17.216 261.979 1.00 50.46 P
ATOM 3 OP1 G A 559 72.167 -18.087 261.681 1.00 50.14 O
ATOM 4 OP2 G A 559 71.245 -15.808 262.359 1.00 50.23 O
ATOM 5 O5' G A 559 69.993 -17.248 260.794 1.00 50.77 O
ATOM 6 C5' G A 559 69.862 -18.365 259.989 1.00 50.93 C
ATOM 7 C4' G A 559 70.967 -18.457 259.006 1.00 50.49 C
ATOM 8 O4' G A 559 71.229 -19.850 258.775 1.00 50.58 O
ATOM 9 C3' G A 559 70.702 -17.823 257.639 1.00 50.45 C
ATOM 10 O3' G A 559 71.196 -16.478 257.573 1.00 50.09 O
ATOM 11 C2' G A 559 71.374 -18.776 256.650 1.00 50.30 C
ATOM 12 O2' G A 559 72.665 -18.311 256.287 1.00 49.76 O
ATOM 13 C1' G A 559 71.508 -20.093 257.444 1.00 50.46 C
ATOM 14 N9 G A 559 70.608 -21.159 256.949 1.00 50.93 N
ATOM 15 C8 G A 559 70.977 -22.466 256.749 1.00 50.98 C
ATOM 16 N7 G A 559 70.042 -23.227 256.249 1.00 51.43 N
ATOM 17 C5 G A 559 68.997 -22.359 256.075 1.00 51.68 C
ATOM 18 C6 G A 559 67.728 -22.629 255.554 1.00 52.18 C
ATOM 19 O6 G A 559 67.309 -23.720 255.143 1.00 52.51 O
ATOM 20 N1 G A 559 66.933 -21.503 255.609 1.00 52.31 N
ATOM 21 C2 G A 559 67.353 -20.292 256.066 1.00 51.99 C
ATOM 22 N2 G A 559 66.481 -19.281 256.036 1.00 52.17 N
ATOM 23 N3 G A 559 68.542 -20.034 256.521 1.00 51.51 N
ATOM 24 C4 G A 559 69.309 -21.101 256.513 1.00 51.38 C
ATOM 25 P G A 560 70.922 -15.494 256.303 1.00 51.09 P
ATOM 26 OP1 G A 560 69.610 -14.854 256.513 1.00 51.50 O
ATOM 27 OP2 G A 560 71.176 -16.265 255.044 1.00 51.06 O
ATOM 28 O5' G A 560 72.043 -14.408 256.461 1.00 50.56 O
TER
ATOM 1 O3' C B 543 61.911 -20.820 253.653 1.00 58.58 O
ATOM 2 P U B 544 63.120 -21.001 254.690 1.00 69.92 P
ATOM 3 OP1 U B 544 62.630 -21.716 255.868 1.00 70.25 O
ATOM 4 OP2 U B 544 63.746 -19.686 254.876 1.00 69.48 O
ATOM 5 O5' U B 544 64.043 -21.927 253.868 1.00 69.68 O
ATOM 6 C5' U B 544 64.556 -23.067 254.460 1.00 69.66 C
ATOM 7 C4' U B 544 63.651 -24.278 254.387 1.00 70.21 C
ATOM 8 O4' U B 544 63.390 -24.607 252.997 1.00 70.35 O
ATOM 9 C3' U B 544 64.364 -25.472 254.948 1.00 70.14 C
ATOM 10 O3' U B 544 63.463 -26.447 255.361 1.00 70.67 O
ATOM 11 C2' U B 544 65.196 -25.957 253.769 1.00 69.88 C
ATOM 12 O2' U B 544 65.581 -27.324 253.829 1.00 69.97 O
ATOM 13 C1' U B 544 64.294 -25.622 252.556 1.00 70.16 C
ATOM 14 N1 U B 544 65.090 -25.073 251.397 1.00 69.76 N
ATOM 15 C2 U B 544 65.659 -25.908 250.428 1.00 69.68 C
ATOM 16 O2 U B 544 65.506 -27.110 250.359 1.00 69.95 O
ATOM 17 N3 U B 544 66.419 -25.317 249.452 1.00 69.30 N
ATOM 18 C4 U B 544 66.706 -23.985 249.326 1.00 68.96 C
ATOM 19 O4 U B 544 67.423 -23.638 248.394 1.00 68.65 O
ATOM 20 C5 U B 544 66.139 -23.157 250.346 1.00 69.04 C
ATOM 21 C6 U B 544 65.394 -23.726 251.304 1.00 69.41 C
ATOM 22 P G B 545 63.728 -27.192 256.739 1.00 61.17 P
ATOM 23 OP1 G B 545 63.598 -28.650 256.473 1.00 61.48 O
ATOM 24 OP2 G B 545 62.839 -26.560 257.740 1.00 61.44 O
ATOM 25 O5' G B 545 65.230 -26.826 257.068 1.00 60.53 O
TER
Atoms:
OP1: (72.167,-18.087,261.681)
OP2: (71.245,-15.808,262.359)
C3': (70.702,-17.823,257.639)
C1': (71.508,-20.093,257.444)
C5': (69.862,-18.365,259.989)
O6: (67.309,-23.720,255.143)
O4': (71.229,-19.850,258.775)
C8: (70.977,-22.466,256.749)
C2: (67.353,-20.292,256.066)
C6: (67.728,-22.629,255.554)
C5: (68.997,-22.359,256.075)
C4: (69.309,-21.101,256.513)
P: (71.014,-17.216,261.979)
C4': (70.967,-18.457,259.006)
C2': (71.374,-18.776,256.650)
O2': (72.665,-18.311,256.287)
N1: (66.933,-21.503,255.609)
N2: (66.481,-19.281,256.036)
N3: (68.542,-20.034,256.521)
N7: (70.042,-23.227,256.249)
N9: (70.608,-21.159,256.949)
O5': (69.993,-17.248,260.794)
O3': (71.196,-16.478,257.573)
OP2: (71.245,-15.808,262.359)
C3': (70.702,-17.823,257.639)
C1': (71.508,-20.093,257.444)
C5': (69.862,-18.365,259.989)
O6: (67.309,-23.720,255.143)
O4': (71.229,-19.850,258.775)
C8: (70.977,-22.466,256.749)
C2: (67.353,-20.292,256.066)
C6: (67.728,-22.629,255.554)
C5: (68.997,-22.359,256.075)
C4: (69.309,-21.101,256.513)
P: (71.014,-17.216,261.979)
C4': (70.967,-18.457,259.006)
C2': (71.374,-18.776,256.650)
O2': (72.665,-18.311,256.287)
N1: (66.933,-21.503,255.609)
N2: (66.481,-19.281,256.036)
N3: (68.542,-20.034,256.521)
N7: (70.042,-23.227,256.249)
N9: (70.608,-21.159,256.949)
O5': (69.993,-17.248,260.794)
O3': (71.196,-16.478,257.573)
C4: (66.706,-23.985,249.326)
N3: (66.419,-25.317,249.452)
OP1: (62.630,-21.716,255.868)
OP2: (63.746,-19.686,254.876)
C2: (65.659,-25.908,250.428)
C1': (64.294,-25.622,252.556)
C3': (64.364,-25.472,254.948)
O5': (64.043,-21.927,253.868)
O4': (63.390,-24.607,252.997)
C5': (64.556,-23.067,254.460)
P: (63.120,-21.001,254.690)
C4': (63.651,-24.278,254.387)
C2': (65.196,-25.957,253.769)
O2': (65.581,-27.324,253.829)
N1: (65.090,-25.073,251.397)
O4: (67.423,-23.638,248.394)
O2: (65.506,-27.110,250.359)
C6: (65.394,-23.726,251.304)
C5: (66.139,-23.157,250.346)
O3': (63.463,-26.447,255.361)
N3: (66.419,-25.317,249.452)
OP1: (62.630,-21.716,255.868)
OP2: (63.746,-19.686,254.876)
C2: (65.659,-25.908,250.428)
C1': (64.294,-25.622,252.556)
C3': (64.364,-25.472,254.948)
O5': (64.043,-21.927,253.868)
O4': (63.390,-24.607,252.997)
C5': (64.556,-23.067,254.460)
P: (63.120,-21.001,254.690)
C4': (63.651,-24.278,254.387)
C2': (65.196,-25.957,253.769)
O2': (65.581,-27.324,253.829)
N1: (65.090,-25.073,251.397)
O4: (67.423,-23.638,248.394)
O2: (65.506,-27.110,250.359)
C6: (65.394,-23.726,251.304)
C5: (66.139,-23.157,250.346)
O3': (63.463,-26.447,255.361)
Image (generated by PyMOL):