ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A463:A453

Extra

PDB:
ATOM 1 O3' C A 462 60.088 134.468 60.095 1.00 16.86 O
ATOM 2 P G A 463 58.644 134.223 59.435 1.00 19.21 P
ATOM 3 OP1 G A 463 57.944 133.245 60.265 1.00 19.24 O
ATOM 4 OP2 G A 463 58.840 133.937 57.975 1.00 21.82 O
ATOM 5 O5' G A 463 57.896 135.624 59.593 1.00 17.60 O
ATOM 6 C5' G A 463 57.582 136.147 60.891 1.00 16.94 C
ATOM 7 C4' G A 463 56.887 137.487 60.785 1.00 17.83 C
ATOM 8 O4' G A 463 57.822 138.540 60.432 1.00 18.10 O
ATOM 9 C3' G A 463 55.778 137.618 59.761 1.00 19.88 C
ATOM 10 O3' G A 463 54.564 136.981 60.176 1.00 21.54 O
ATOM 11 C2' G A 463 55.698 139.132 59.600 1.00 19.61 C
ATOM 12 O2' G A 463 55.065 139.794 60.665 1.00 20.59 O
ATOM 13 C1' G A 463 57.177 139.501 59.603 1.00 19.36 C
ATOM 14 N9 G A 463 57.729 139.381 58.260 1.00 21.02 N
ATOM 15 C8 G A 463 58.359 138.278 57.741 1.00 23.83 C
ATOM 16 N7 G A 463 58.689 138.415 56.491 1.00 24.97 N
ATOM 17 C5 G A 463 58.259 139.693 56.164 1.00 23.18 C
ATOM 18 C6 G A 463 58.325 140.385 54.940 1.00 22.62 C
ATOM 19 O6 G A 463 58.737 139.978 53.852 1.00 21.73 O
ATOM 20 N1 G A 463 57.826 141.672 55.056 1.00 21.34 N
ATOM 21 C2 G A 463 57.307 142.213 56.202 1.00 22.63 C
ATOM 22 N2 G A 463 56.927 143.493 56.133 1.00 24.26 N
ATOM 23 N3 G A 463 57.188 141.556 57.341 1.00 23.03 N
ATOM 24 C4 G A 463 57.691 140.313 57.254 1.00 21.57 C
ATOM 25 P A A 464 53.486 136.505 59.075 1.00 22.93 P
ATOM 26 OP1 A A 464 52.514 135.610 59.756 1.00 23.08 O
ATOM 27 OP2 A A 464 54.202 136.014 57.885 1.00 20.37 O
ATOM 28 O5' A A 464 52.758 137.868 58.693 1.00 23.10 O
TER

ATOM 1 O3' G B 452 56.257 143.405 51.515 1.00 33.01 O
ATOM 2 P U B 453 57.367 144.427 52.057 1.00 35.50 P
ATOM 3 OP1 U B 453 58.178 144.881 50.887 1.00 33.06 O
ATOM 4 OP2 U B 453 58.046 143.819 53.228 1.00 32.76 O
ATOM 5 O5' U B 453 56.485 145.645 52.570 1.00 31.08 O
ATOM 6 C5' U B 453 55.829 146.512 51.643 1.00 28.95 C
ATOM 7 C4' U B 453 54.569 147.060 52.255 1.00 29.24 C
ATOM 8 O4' U B 453 53.571 146.018 52.331 1.00 30.17 O
ATOM 9 C3' U B 453 54.702 147.568 53.679 1.00 30.49 C
ATOM 10 O3' U B 453 55.205 148.902 53.699 1.00 30.84 O
ATOM 11 C2' U B 453 53.274 147.462 54.197 1.00 29.79 C
ATOM 12 O2' U B 453 52.449 148.515 53.743 1.00 31.82 O
ATOM 13 C1' U B 453 52.807 146.170 53.520 1.00 29.06 C
ATOM 14 N1 U B 453 52.989 144.958 54.334 1.00 28.27 N
ATOM 15 C2 U B 453 52.356 144.879 55.563 1.00 26.97 C
ATOM 16 O2 U B 453 51.644 145.759 56.003 1.00 29.09 O
ATOM 17 N3 U B 453 52.593 143.718 56.255 1.00 27.87 N
ATOM 18 C4 U B 453 53.375 142.646 55.853 1.00 29.02 C
ATOM 19 O4 U B 453 53.553 141.696 56.622 1.00 29.80 O
ATOM 20 C5 U B 453 53.980 142.799 54.576 1.00 30.38 C
ATOM 21 C6 U B 453 53.778 143.918 53.879 1.00 29.83 C
ATOM 22 P A B 454 56.393 149.285 54.707 1.00 31.00 P
ATOM 23 OP1 A B 454 56.743 150.694 54.459 1.00 31.18 O
ATOM 24 OP2 A B 454 57.451 148.241 54.675 1.00 29.29 O
ATOM 25 O5' A B 454 55.687 149.242 56.126 1.00 27.96 O
TER

Atoms:
OP1: (57.944,133.245,60.265)
OP2: (58.840,133.937,57.975)
C3': (55.778,137.618,59.761)
C1': (57.177,139.501,59.603)
C5': (57.582,136.147,60.891)
O6: (58.737,139.978,53.852)
O4': (57.822,138.540,60.432)
C8: (58.359,138.278,57.741)
C2: (57.307,142.213,56.202)
C6: (58.325,140.385,54.940)
C5: (58.259,139.693,56.164)
C4: (57.691,140.313,57.254)
P: (58.644,134.223,59.435)
C4': (56.887,137.487,60.785)
C2': (55.698,139.132,59.600)
O2': (55.065,139.794,60.665)
N1: (57.826,141.672,55.056)
N2: (56.927,143.493,56.133)
N3: (57.188,141.556,57.341)
N7: (58.689,138.415,56.491)
N9: (57.729,139.381,58.260)
O5': (57.896,135.624,59.593)
O3': (54.564,136.981,60.176)
C4: (53.375,142.646,55.853)
N3: (52.593,143.718,56.255)
OP1: (58.178,144.881,50.887)
OP2: (58.046,143.819,53.228)
C2: (52.356,144.879,55.563)
C1': (52.807,146.170,53.520)
C3': (54.702,147.568,53.679)
O5': (56.485,145.645,52.570)
O4': (53.571,146.018,52.331)
C5': (55.829,146.512,51.643)
P: (57.367,144.427,52.057)
C4': (54.569,147.060,52.255)
C2': (53.274,147.462,54.197)
O2': (52.449,148.515,53.743)
N1: (52.989,144.958,54.334)
O4: (53.553,141.696,56.622)
O2: (51.644,145.759,56.003)
C6: (53.778,143.918,53.879)
C5: (53.980,142.799,54.576)
O3': (55.205,148.902,53.699)
Image (generated by PyMOL):
PyMOL image
show in jmol