Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.295 92.139 107.985 1.00 40.25 O
ATOM 2 P G A 556 3.780 91.570 109.400 1.00 41.16 P
ATOM 3 OP1 G A 556 4.782 92.004 110.415 1.00 42.74 O
ATOM 4 OP2 G A 556 3.476 90.124 109.237 1.00 38.16 O
ATOM 5 O5' G A 556 2.435 92.378 109.672 1.00 41.28 O
ATOM 6 C5' G A 556 2.473 93.700 110.239 1.00 42.92 C
ATOM 7 C4' G A 556 1.068 94.212 110.457 1.00 45.80 C
ATOM 8 O4' G A 556 0.397 94.362 109.174 1.00 44.90 O
ATOM 9 C3' G A 556 0.144 93.286 111.233 1.00 46.85 C
ATOM 10 O3' G A 556 0.347 93.339 112.639 1.00 48.76 O
ATOM 11 C2' G A 556 -1.229 93.780 110.798 1.00 46.37 C
ATOM 12 O2' G A 556 -1.585 95.002 111.414 1.00 45.13 O
ATOM 13 C1' G A 556 -0.983 94.029 109.310 1.00 45.39 C
ATOM 14 N9 G A 556 -1.246 92.837 108.505 1.00 41.66 N
ATOM 15 C8 G A 556 -0.333 91.884 108.132 1.00 41.98 C
ATOM 16 N7 G A 556 -0.853 90.924 107.417 1.00 41.91 N
ATOM 17 C5 G A 556 -2.195 91.261 107.315 1.00 41.66 C
ATOM 18 C6 G A 556 -3.250 90.594 106.659 1.00 41.59 C
ATOM 19 O6 G A 556 -3.209 89.530 106.028 1.00 43.55 O
ATOM 20 N1 G A 556 -4.451 91.285 106.783 1.00 40.55 N
ATOM 21 C2 G A 556 -4.615 92.467 107.462 1.00 42.85 C
ATOM 22 N2 G A 556 -5.859 92.986 107.462 1.00 42.47 N
ATOM 23 N3 G A 556 -3.633 93.099 108.092 1.00 43.50 N
ATOM 24 C4 G A 556 -2.455 92.443 107.975 1.00 43.07 C
ATOM 25 P A A 557 -0.135 92.102 113.552 1.00 51.93 P
ATOM 26 OP1 A A 557 0.447 92.286 114.909 1.00 52.12 O
ATOM 27 OP2 A A 557 0.091 90.818 112.827 1.00 48.50 O
ATOM 28 O5' A A 557 -1.704 92.338 113.648 1.00 51.71 O
TER
ATOM 1 O3' G B 576 -7.789 88.654 106.706 1.00 56.14 O
ATOM 2 P U B 577 -8.109 89.703 105.527 1.00 57.19 P
ATOM 3 OP1 U B 577 -8.694 88.967 104.368 1.00 56.91 O
ATOM 4 OP2 U B 577 -6.906 90.552 105.324 1.00 58.00 O
ATOM 5 O5' U B 577 -9.234 90.633 106.166 1.00 56.44 O
ATOM 6 C5' U B 577 -10.572 90.137 106.414 1.00 55.25 C
ATOM 7 C4' U B 577 -11.166 90.832 107.615 1.00 54.77 C
ATOM 8 O4' U B 577 -10.571 90.320 108.839 1.00 54.78 O
ATOM 9 C3' U B 577 -10.904 92.326 107.656 1.00 55.28 C
ATOM 10 O3' U B 577 -11.839 93.040 106.849 1.00 56.89 O
ATOM 11 C2' U B 577 -11.001 92.644 109.144 1.00 55.28 C
ATOM 12 O2' U B 577 -12.330 92.777 109.590 1.00 56.40 O
ATOM 13 C1' U B 577 -10.397 91.382 109.772 1.00 54.86 C
ATOM 14 N1 U B 577 -8.968 91.470 110.139 1.00 54.37 N
ATOM 15 C2 U B 577 -8.573 92.466 111.030 1.00 54.07 C
ATOM 16 O2 U B 577 -9.344 93.289 111.501 1.00 53.84 O
ATOM 17 N3 U B 577 -7.234 92.465 111.346 1.00 54.60 N
ATOM 18 C4 U B 577 -6.260 91.602 110.872 1.00 54.32 C
ATOM 19 O4 U B 577 -5.087 91.756 111.226 1.00 53.54 O
ATOM 20 C5 U B 577 -6.736 90.612 109.954 1.00 53.37 C
ATOM 21 C6 U B 577 -8.035 90.581 109.624 1.00 55.05 C
ATOM 22 P A B 578 -11.397 94.419 106.150 1.00 58.05 P
ATOM 23 OP1 A B 578 -12.538 94.973 105.376 1.00 58.40 O
ATOM 24 OP2 A B 578 -10.090 94.199 105.472 1.00 59.22 O
ATOM 25 O5' A B 578 -11.144 95.384 107.385 1.00 56.96 O
TER
ATOM 2 P G A 556 3.780 91.570 109.400 1.00 41.16 P
ATOM 3 OP1 G A 556 4.782 92.004 110.415 1.00 42.74 O
ATOM 4 OP2 G A 556 3.476 90.124 109.237 1.00 38.16 O
ATOM 5 O5' G A 556 2.435 92.378 109.672 1.00 41.28 O
ATOM 6 C5' G A 556 2.473 93.700 110.239 1.00 42.92 C
ATOM 7 C4' G A 556 1.068 94.212 110.457 1.00 45.80 C
ATOM 8 O4' G A 556 0.397 94.362 109.174 1.00 44.90 O
ATOM 9 C3' G A 556 0.144 93.286 111.233 1.00 46.85 C
ATOM 10 O3' G A 556 0.347 93.339 112.639 1.00 48.76 O
ATOM 11 C2' G A 556 -1.229 93.780 110.798 1.00 46.37 C
ATOM 12 O2' G A 556 -1.585 95.002 111.414 1.00 45.13 O
ATOM 13 C1' G A 556 -0.983 94.029 109.310 1.00 45.39 C
ATOM 14 N9 G A 556 -1.246 92.837 108.505 1.00 41.66 N
ATOM 15 C8 G A 556 -0.333 91.884 108.132 1.00 41.98 C
ATOM 16 N7 G A 556 -0.853 90.924 107.417 1.00 41.91 N
ATOM 17 C5 G A 556 -2.195 91.261 107.315 1.00 41.66 C
ATOM 18 C6 G A 556 -3.250 90.594 106.659 1.00 41.59 C
ATOM 19 O6 G A 556 -3.209 89.530 106.028 1.00 43.55 O
ATOM 20 N1 G A 556 -4.451 91.285 106.783 1.00 40.55 N
ATOM 21 C2 G A 556 -4.615 92.467 107.462 1.00 42.85 C
ATOM 22 N2 G A 556 -5.859 92.986 107.462 1.00 42.47 N
ATOM 23 N3 G A 556 -3.633 93.099 108.092 1.00 43.50 N
ATOM 24 C4 G A 556 -2.455 92.443 107.975 1.00 43.07 C
ATOM 25 P A A 557 -0.135 92.102 113.552 1.00 51.93 P
ATOM 26 OP1 A A 557 0.447 92.286 114.909 1.00 52.12 O
ATOM 27 OP2 A A 557 0.091 90.818 112.827 1.00 48.50 O
ATOM 28 O5' A A 557 -1.704 92.338 113.648 1.00 51.71 O
TER
ATOM 1 O3' G B 576 -7.789 88.654 106.706 1.00 56.14 O
ATOM 2 P U B 577 -8.109 89.703 105.527 1.00 57.19 P
ATOM 3 OP1 U B 577 -8.694 88.967 104.368 1.00 56.91 O
ATOM 4 OP2 U B 577 -6.906 90.552 105.324 1.00 58.00 O
ATOM 5 O5' U B 577 -9.234 90.633 106.166 1.00 56.44 O
ATOM 6 C5' U B 577 -10.572 90.137 106.414 1.00 55.25 C
ATOM 7 C4' U B 577 -11.166 90.832 107.615 1.00 54.77 C
ATOM 8 O4' U B 577 -10.571 90.320 108.839 1.00 54.78 O
ATOM 9 C3' U B 577 -10.904 92.326 107.656 1.00 55.28 C
ATOM 10 O3' U B 577 -11.839 93.040 106.849 1.00 56.89 O
ATOM 11 C2' U B 577 -11.001 92.644 109.144 1.00 55.28 C
ATOM 12 O2' U B 577 -12.330 92.777 109.590 1.00 56.40 O
ATOM 13 C1' U B 577 -10.397 91.382 109.772 1.00 54.86 C
ATOM 14 N1 U B 577 -8.968 91.470 110.139 1.00 54.37 N
ATOM 15 C2 U B 577 -8.573 92.466 111.030 1.00 54.07 C
ATOM 16 O2 U B 577 -9.344 93.289 111.501 1.00 53.84 O
ATOM 17 N3 U B 577 -7.234 92.465 111.346 1.00 54.60 N
ATOM 18 C4 U B 577 -6.260 91.602 110.872 1.00 54.32 C
ATOM 19 O4 U B 577 -5.087 91.756 111.226 1.00 53.54 O
ATOM 20 C5 U B 577 -6.736 90.612 109.954 1.00 53.37 C
ATOM 21 C6 U B 577 -8.035 90.581 109.624 1.00 55.05 C
ATOM 22 P A B 578 -11.397 94.419 106.150 1.00 58.05 P
ATOM 23 OP1 A B 578 -12.538 94.973 105.376 1.00 58.40 O
ATOM 24 OP2 A B 578 -10.090 94.199 105.472 1.00 59.22 O
ATOM 25 O5' A B 578 -11.144 95.384 107.385 1.00 56.96 O
TER
Atoms:
OP1: (4.782,92.004,110.415)
OP2: (3.476,90.124,109.237)
C3': (0.144,93.286,111.233)
C1': (-0.983,94.029,109.310)
C5': (2.473,93.700,110.239)
O6: (-3.209,89.530,106.028)
O4': (0.397,94.362,109.174)
C8: (-0.333,91.884,108.132)
C2: (-4.615,92.467,107.462)
C6: (-3.250,90.594,106.659)
C5: (-2.195,91.261,107.315)
C4: (-2.455,92.443,107.975)
P: (3.780,91.570,109.400)
C4': (1.068,94.212,110.457)
C2': (-1.229,93.780,110.798)
O2': (-1.585,95.002,111.414)
N1: (-4.451,91.285,106.783)
N2: (-5.859,92.986,107.462)
N3: (-3.633,93.099,108.092)
N7: (-0.853,90.924,107.417)
N9: (-1.246,92.837,108.505)
O5': (2.435,92.378,109.672)
O3': (0.347,93.339,112.639)
OP2: (3.476,90.124,109.237)
C3': (0.144,93.286,111.233)
C1': (-0.983,94.029,109.310)
C5': (2.473,93.700,110.239)
O6: (-3.209,89.530,106.028)
O4': (0.397,94.362,109.174)
C8: (-0.333,91.884,108.132)
C2: (-4.615,92.467,107.462)
C6: (-3.250,90.594,106.659)
C5: (-2.195,91.261,107.315)
C4: (-2.455,92.443,107.975)
P: (3.780,91.570,109.400)
C4': (1.068,94.212,110.457)
C2': (-1.229,93.780,110.798)
O2': (-1.585,95.002,111.414)
N1: (-4.451,91.285,106.783)
N2: (-5.859,92.986,107.462)
N3: (-3.633,93.099,108.092)
N7: (-0.853,90.924,107.417)
N9: (-1.246,92.837,108.505)
O5': (2.435,92.378,109.672)
O3': (0.347,93.339,112.639)
C4: (-6.260,91.602,110.872)
N3: (-7.234,92.465,111.346)
OP1: (-8.694,88.967,104.368)
OP2: (-6.906,90.552,105.324)
C2: (-8.573,92.466,111.030)
C1': (-10.397,91.382,109.772)
C3': (-10.904,92.326,107.656)
O5': (-9.234,90.633,106.166)
O4': (-10.571,90.320,108.839)
C5': (-10.572,90.137,106.414)
P: (-8.109,89.703,105.527)
C4': (-11.166,90.832,107.615)
C2': (-11.001,92.644,109.144)
O2': (-12.330,92.777,109.590)
N1: (-8.968,91.470,110.139)
O4: (-5.087,91.756,111.226)
O2: (-9.344,93.289,111.501)
C6: (-8.035,90.581,109.624)
C5: (-6.736,90.612,109.954)
O3': (-11.839,93.040,106.849)
N3: (-7.234,92.465,111.346)
OP1: (-8.694,88.967,104.368)
OP2: (-6.906,90.552,105.324)
C2: (-8.573,92.466,111.030)
C1': (-10.397,91.382,109.772)
C3': (-10.904,92.326,107.656)
O5': (-9.234,90.633,106.166)
O4': (-10.571,90.320,108.839)
C5': (-10.572,90.137,106.414)
P: (-8.109,89.703,105.527)
C4': (-11.166,90.832,107.615)
C2': (-11.001,92.644,109.144)
O2': (-12.330,92.777,109.590)
N1: (-8.968,91.470,110.139)
O4: (-5.087,91.756,111.226)
O2: (-9.344,93.289,111.501)
C6: (-8.035,90.581,109.624)
C5: (-6.736,90.612,109.954)
O3': (-11.839,93.040,106.849)
Image (generated by PyMOL):