ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q93:B17:B9

Extra

PDB:
ATOM 1 O3' C A 16 4.616 24.061 69.019 1.00 50.91 O
ATOM 2 P G A 17 4.452 23.951 67.430 1.00 50.48 P
ATOM 3 OP1 G A 17 5.790 24.186 66.825 1.00 50.35 O
ATOM 4 OP2 G A 17 3.304 24.806 67.038 1.00 50.47 O
ATOM 5 O5' G A 17 4.059 22.424 67.215 1.00 47.67 O
ATOM 6 C5' G A 17 4.756 21.408 67.924 1.00 44.85 C
ATOM 7 C4' G A 17 4.051 20.089 67.787 1.00 42.37 C
ATOM 8 O4' G A 17 3.027 19.956 68.810 1.00 41.54 O
ATOM 9 C3' G A 17 3.286 19.852 66.502 1.00 41.08 C
ATOM 10 O3' G A 17 4.148 19.522 65.427 1.00 40.20 O
ATOM 11 C2' G A 17 2.389 18.702 66.929 1.00 40.42 C
ATOM 12 O2' G A 17 3.087 17.489 67.115 1.00 40.62 O
ATOM 13 C1' G A 17 1.928 19.222 68.287 1.00 40.40 C
ATOM 14 N9 G A 17 0.801 20.135 68.143 1.00 39.07 N
ATOM 15 C8 G A 17 0.845 21.505 68.033 1.00 38.07 C
ATOM 16 N7 G A 17 -0.335 22.044 67.899 1.00 37.85 N
ATOM 17 C5 G A 17 -1.210 20.965 67.924 1.00 37.72 C
ATOM 18 C6 G A 17 -2.622 20.924 67.818 1.00 37.65 C
ATOM 19 O6 G A 17 -3.410 21.860 67.680 1.00 38.59 O
ATOM 20 N1 G A 17 -3.101 19.621 67.891 1.00 37.05 N
ATOM 21 C2 G A 17 -2.324 18.500 68.047 1.00 36.37 C
ATOM 22 N2 G A 17 -2.974 17.321 68.104 1.00 34.51 N
ATOM 23 N3 G A 17 -1.008 18.528 68.143 1.00 37.03 N
ATOM 24 C4 G A 17 -0.522 19.782 68.075 1.00 37.32 C
ATOM 25 P A A 18 3.609 19.634 63.918 1.00 39.17 P
ATOM 26 OP1 A A 18 4.762 19.380 63.028 1.00 39.54 O
ATOM 27 OP2 A A 18 2.826 20.886 63.770 1.00 38.48 O
ATOM 28 O5' A A 18 2.604 18.404 63.784 1.00 38.76 O
TER

ATOM 1 O3' G B 8 -6.781 18.654 65.881 1.00 36.11 O
ATOM 2 P U B 9 -6.890 18.423 67.458 1.00 35.71 P
ATOM 3 OP1 U B 9 -8.080 19.167 67.934 1.00 35.23 O
ATOM 4 OP2 U B 9 -5.562 18.723 68.045 1.00 36.36 O
ATOM 5 O5' U B 9 -7.181 16.862 67.582 1.00 35.81 O
ATOM 6 C5' U B 9 -8.258 16.263 66.870 1.00 34.66 C
ATOM 7 C4' U B 9 -7.843 14.919 66.319 1.00 34.29 C
ATOM 8 O4' U B 9 -7.133 15.112 65.065 1.00 33.23 O
ATOM 9 C3' U B 9 -6.887 14.101 67.177 1.00 34.15 C
ATOM 10 O3' U B 9 -7.581 13.315 68.136 1.00 36.29 O
ATOM 11 C2' U B 9 -6.203 13.217 66.147 1.00 32.64 C
ATOM 12 O2' U B 9 -6.976 12.097 65.779 1.00 31.23 O
ATOM 13 C1' U B 9 -6.064 14.184 64.972 1.00 32.69 C
ATOM 14 N1 U B 9 -4.795 14.931 64.956 1.00 31.83 N
ATOM 15 C2 U B 9 -3.632 14.204 64.810 1.00 29.64 C
ATOM 16 O2 U B 9 -3.617 12.992 64.737 1.00 27.64 O
ATOM 17 N3 U B 9 -2.484 14.948 64.753 1.00 26.89 N
ATOM 18 C4 U B 9 -2.375 16.310 64.829 1.00 28.88 C
ATOM 19 O4 U B 9 -1.263 16.830 64.733 1.00 27.84 O
ATOM 20 C5 U B 9 -3.625 17.001 64.996 1.00 30.55 C
ATOM 21 C6 U B 9 -4.762 16.302 65.058 1.00 30.02 C
ATOM 22 P A B 10 -7.081 13.314 69.665 1.00 36.48 P
ATOM 23 OP1 A B 10 -8.196 12.798 70.485 1.00 37.53 O
ATOM 24 OP2 A B 10 -6.489 14.648 69.972 1.00 34.41 O
ATOM 25 O5' A B 10 -5.894 12.248 69.702 1.00 36.27 O
TER

Atoms:
OP1: (5.790,24.186,66.825)
OP2: (3.304,24.806,67.038)
C3': (3.286,19.852,66.502)
C1': (1.928,19.222,68.287)
C5': (4.756,21.408,67.924)
O6: (-3.410,21.860,67.680)
O4': (3.027,19.956,68.810)
C8: (0.845,21.505,68.033)
C2: (-2.324,18.500,68.047)
C6: (-2.622,20.924,67.818)
C5: (-1.210,20.965,67.924)
C4: (-0.522,19.782,68.075)
P: (4.452,23.951,67.430)
C4': (4.051,20.089,67.787)
C2': (2.389,18.702,66.929)
O2': (3.087,17.489,67.115)
N1: (-3.101,19.621,67.891)
N2: (-2.974,17.321,68.104)
N3: (-1.008,18.528,68.143)
N7: (-0.335,22.044,67.899)
N9: (0.801,20.135,68.143)
O5': (4.059,22.424,67.215)
O3': (4.148,19.522,65.427)
C4: (-2.375,16.310,64.829)
N3: (-2.484,14.948,64.753)
OP1: (-8.080,19.167,67.934)
OP2: (-5.562,18.723,68.045)
C2: (-3.632,14.204,64.810)
C1': (-6.064,14.184,64.972)
C3': (-6.887,14.101,67.177)
O5': (-7.181,16.862,67.582)
O4': (-7.133,15.112,65.065)
C5': (-8.258,16.263,66.870)
P: (-6.890,18.423,67.458)
C4': (-7.843,14.919,66.319)
C2': (-6.203,13.217,66.147)
O2': (-6.976,12.097,65.779)
N1: (-4.795,14.931,64.956)
O4: (-1.263,16.830,64.733)
O2: (-3.617,12.992,64.737)
C6: (-4.762,16.302,65.058)
C5: (-3.625,17.001,64.996)
O3': (-7.581,13.315,68.136)
Image (generated by PyMOL):
PyMOL image
show in jmol