Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:9101:978
Extra
PDB:
ATOM 1 O3' G A 100 37.135 63.000 110.724 1.00 46.92 O
ATOM 2 P G A 101 37.435 61.785 111.723 1.00 48.18 P
ATOM 3 OP1 G A 101 37.826 60.613 110.886 1.00 47.71 O
ATOM 4 OP2 G A 101 36.300 61.669 112.677 1.00 47.44 O
ATOM 5 O5' G A 101 38.731 62.249 112.517 1.00 46.35 O
ATOM 6 C5' G A 101 40.027 62.134 111.912 1.00 48.56 C
ATOM 7 C4' G A 101 41.062 62.766 112.792 1.00 48.36 C
ATOM 8 O4' G A 101 40.619 64.113 113.118 1.00 51.01 O
ATOM 9 C3' G A 101 41.213 62.126 114.154 1.00 46.93 C
ATOM 10 O3' G A 101 42.015 60.972 114.107 1.00 44.81 O
ATOM 11 C2' G A 101 41.826 63.256 114.960 1.00 47.93 C
ATOM 12 O2' G A 101 43.178 63.486 114.629 1.00 46.90 O
ATOM 13 C1' G A 101 41.008 64.436 114.446 1.00 49.98 C
ATOM 14 N9 G A 101 39.804 64.670 115.241 1.00 51.57 N
ATOM 15 C8 G A 101 38.497 64.436 114.877 1.00 51.55 C
ATOM 16 N7 G A 101 37.641 64.775 115.802 1.00 51.50 N
ATOM 17 C5 G A 101 38.429 65.257 116.841 1.00 51.19 C
ATOM 18 C6 G A 101 38.063 65.784 118.106 1.00 51.50 C
ATOM 19 O6 G A 101 36.929 65.945 118.575 1.00 53.13 O
ATOM 20 N1 G A 101 39.179 66.153 118.849 1.00 50.38 N
ATOM 21 C2 G A 101 40.479 66.044 118.428 1.00 50.37 C
ATOM 22 N2 G A 101 41.417 66.478 119.275 1.00 48.87 N
ATOM 23 N3 G A 101 40.834 65.554 117.257 1.00 51.86 N
ATOM 24 C4 G A 101 39.764 65.187 116.516 1.00 51.60 C
ATOM 25 P A A 102 41.884 59.881 115.275 1.00 43.98 P
ATOM 26 OP1 A A 102 42.534 58.635 114.774 1.00 39.59 O
ATOM 27 OP2 A A 102 40.477 59.838 115.748 1.00 44.24 O
ATOM 28 O5' A A 102 42.759 60.495 116.448 1.00 42.16 O
TER
ATOM 1 O3' G B 77 39.092 66.061 123.304 1.00 57.57 O
ATOM 2 P U B 78 39.357 67.565 122.805 1.00 57.48 P
ATOM 3 OP1 U B 78 38.359 68.490 123.420 1.00 56.09 O
ATOM 4 OP2 U B 78 39.514 67.538 121.332 1.00 56.44 O
ATOM 5 O5' U B 78 40.792 67.884 123.408 1.00 56.05 O
ATOM 6 C5' U B 78 41.001 67.977 124.823 1.00 54.47 C
ATOM 7 C4' U B 78 42.400 67.537 125.157 1.00 54.72 C
ATOM 8 O4' U B 78 42.507 66.099 125.023 1.00 54.85 O
ATOM 9 C3' U B 78 43.462 68.083 124.224 1.00 54.49 C
ATOM 10 O3' U B 78 43.849 69.384 124.628 1.00 56.19 O
ATOM 11 C2' U B 78 44.574 67.056 124.365 1.00 54.51 C
ATOM 12 O2' U B 78 45.326 67.213 125.550 1.00 55.20 O
ATOM 13 C1' U B 78 43.768 65.761 124.478 1.00 53.96 C
ATOM 14 N1 U B 78 43.549 65.065 123.200 1.00 54.56 N
ATOM 15 C2 U B 78 44.667 64.682 122.476 1.00 54.48 C
ATOM 16 O2 U B 78 45.809 64.921 122.841 1.00 53.29 O
ATOM 17 N3 U B 78 44.400 64.008 121.310 1.00 54.08 N
ATOM 18 C4 U B 78 43.160 63.679 120.803 1.00 55.35 C
ATOM 19 O4 U B 78 43.091 63.009 119.767 1.00 55.05 O
ATOM 20 C5 U B 78 42.049 64.121 121.599 1.00 54.28 C
ATOM 21 C6 U B 78 42.275 64.785 122.736 1.00 53.83 C
ATOM 22 P A B 79 44.040 70.538 123.529 1.00 57.68 P
ATOM 23 OP1 A B 79 44.521 71.734 124.275 1.00 56.03 O
ATOM 24 OP2 A B 79 42.804 70.641 122.701 1.00 55.82 O
ATOM 25 O5' A B 79 45.231 69.983 122.625 1.00 55.63 O
TER
ATOM 2 P G A 101 37.435 61.785 111.723 1.00 48.18 P
ATOM 3 OP1 G A 101 37.826 60.613 110.886 1.00 47.71 O
ATOM 4 OP2 G A 101 36.300 61.669 112.677 1.00 47.44 O
ATOM 5 O5' G A 101 38.731 62.249 112.517 1.00 46.35 O
ATOM 6 C5' G A 101 40.027 62.134 111.912 1.00 48.56 C
ATOM 7 C4' G A 101 41.062 62.766 112.792 1.00 48.36 C
ATOM 8 O4' G A 101 40.619 64.113 113.118 1.00 51.01 O
ATOM 9 C3' G A 101 41.213 62.126 114.154 1.00 46.93 C
ATOM 10 O3' G A 101 42.015 60.972 114.107 1.00 44.81 O
ATOM 11 C2' G A 101 41.826 63.256 114.960 1.00 47.93 C
ATOM 12 O2' G A 101 43.178 63.486 114.629 1.00 46.90 O
ATOM 13 C1' G A 101 41.008 64.436 114.446 1.00 49.98 C
ATOM 14 N9 G A 101 39.804 64.670 115.241 1.00 51.57 N
ATOM 15 C8 G A 101 38.497 64.436 114.877 1.00 51.55 C
ATOM 16 N7 G A 101 37.641 64.775 115.802 1.00 51.50 N
ATOM 17 C5 G A 101 38.429 65.257 116.841 1.00 51.19 C
ATOM 18 C6 G A 101 38.063 65.784 118.106 1.00 51.50 C
ATOM 19 O6 G A 101 36.929 65.945 118.575 1.00 53.13 O
ATOM 20 N1 G A 101 39.179 66.153 118.849 1.00 50.38 N
ATOM 21 C2 G A 101 40.479 66.044 118.428 1.00 50.37 C
ATOM 22 N2 G A 101 41.417 66.478 119.275 1.00 48.87 N
ATOM 23 N3 G A 101 40.834 65.554 117.257 1.00 51.86 N
ATOM 24 C4 G A 101 39.764 65.187 116.516 1.00 51.60 C
ATOM 25 P A A 102 41.884 59.881 115.275 1.00 43.98 P
ATOM 26 OP1 A A 102 42.534 58.635 114.774 1.00 39.59 O
ATOM 27 OP2 A A 102 40.477 59.838 115.748 1.00 44.24 O
ATOM 28 O5' A A 102 42.759 60.495 116.448 1.00 42.16 O
TER
ATOM 1 O3' G B 77 39.092 66.061 123.304 1.00 57.57 O
ATOM 2 P U B 78 39.357 67.565 122.805 1.00 57.48 P
ATOM 3 OP1 U B 78 38.359 68.490 123.420 1.00 56.09 O
ATOM 4 OP2 U B 78 39.514 67.538 121.332 1.00 56.44 O
ATOM 5 O5' U B 78 40.792 67.884 123.408 1.00 56.05 O
ATOM 6 C5' U B 78 41.001 67.977 124.823 1.00 54.47 C
ATOM 7 C4' U B 78 42.400 67.537 125.157 1.00 54.72 C
ATOM 8 O4' U B 78 42.507 66.099 125.023 1.00 54.85 O
ATOM 9 C3' U B 78 43.462 68.083 124.224 1.00 54.49 C
ATOM 10 O3' U B 78 43.849 69.384 124.628 1.00 56.19 O
ATOM 11 C2' U B 78 44.574 67.056 124.365 1.00 54.51 C
ATOM 12 O2' U B 78 45.326 67.213 125.550 1.00 55.20 O
ATOM 13 C1' U B 78 43.768 65.761 124.478 1.00 53.96 C
ATOM 14 N1 U B 78 43.549 65.065 123.200 1.00 54.56 N
ATOM 15 C2 U B 78 44.667 64.682 122.476 1.00 54.48 C
ATOM 16 O2 U B 78 45.809 64.921 122.841 1.00 53.29 O
ATOM 17 N3 U B 78 44.400 64.008 121.310 1.00 54.08 N
ATOM 18 C4 U B 78 43.160 63.679 120.803 1.00 55.35 C
ATOM 19 O4 U B 78 43.091 63.009 119.767 1.00 55.05 O
ATOM 20 C5 U B 78 42.049 64.121 121.599 1.00 54.28 C
ATOM 21 C6 U B 78 42.275 64.785 122.736 1.00 53.83 C
ATOM 22 P A B 79 44.040 70.538 123.529 1.00 57.68 P
ATOM 23 OP1 A B 79 44.521 71.734 124.275 1.00 56.03 O
ATOM 24 OP2 A B 79 42.804 70.641 122.701 1.00 55.82 O
ATOM 25 O5' A B 79 45.231 69.983 122.625 1.00 55.63 O
TER
Atoms:
OP1: (37.826,60.613,110.886)
OP2: (36.300,61.669,112.677)
C3': (41.213,62.126,114.154)
C1': (41.008,64.436,114.446)
C5': (40.027,62.134,111.912)
O6: (36.929,65.945,118.575)
O4': (40.619,64.113,113.118)
C8: (38.497,64.436,114.877)
C2: (40.479,66.044,118.428)
C6: (38.063,65.784,118.106)
C5: (38.429,65.257,116.841)
C4: (39.764,65.187,116.516)
P: (37.435,61.785,111.723)
C4': (41.062,62.766,112.792)
C2': (41.826,63.256,114.960)
O2': (43.178,63.486,114.629)
N1: (39.179,66.153,118.849)
N2: (41.417,66.478,119.275)
N3: (40.834,65.554,117.257)
N7: (37.641,64.775,115.802)
N9: (39.804,64.670,115.241)
O5': (38.731,62.249,112.517)
O3': (42.015,60.972,114.107)
OP2: (36.300,61.669,112.677)
C3': (41.213,62.126,114.154)
C1': (41.008,64.436,114.446)
C5': (40.027,62.134,111.912)
O6: (36.929,65.945,118.575)
O4': (40.619,64.113,113.118)
C8: (38.497,64.436,114.877)
C2: (40.479,66.044,118.428)
C6: (38.063,65.784,118.106)
C5: (38.429,65.257,116.841)
C4: (39.764,65.187,116.516)
P: (37.435,61.785,111.723)
C4': (41.062,62.766,112.792)
C2': (41.826,63.256,114.960)
O2': (43.178,63.486,114.629)
N1: (39.179,66.153,118.849)
N2: (41.417,66.478,119.275)
N3: (40.834,65.554,117.257)
N7: (37.641,64.775,115.802)
N9: (39.804,64.670,115.241)
O5': (38.731,62.249,112.517)
O3': (42.015,60.972,114.107)
C4: (43.160,63.679,120.803)
N3: (44.400,64.008,121.310)
OP1: (38.359,68.490,123.420)
OP2: (39.514,67.538,121.332)
C2: (44.667,64.682,122.476)
C1': (43.768,65.761,124.478)
C3': (43.462,68.083,124.224)
O5': (40.792,67.884,123.408)
O4': (42.507,66.099,125.023)
C5': (41.001,67.977,124.823)
P: (39.357,67.565,122.805)
C4': (42.400,67.537,125.157)
C2': (44.574,67.056,124.365)
O2': (45.326,67.213,125.550)
N1: (43.549,65.065,123.200)
O4: (43.091,63.009,119.767)
O2: (45.809,64.921,122.841)
C6: (42.275,64.785,122.736)
C5: (42.049,64.121,121.599)
O3': (43.849,69.384,124.628)
N3: (44.400,64.008,121.310)
OP1: (38.359,68.490,123.420)
OP2: (39.514,67.538,121.332)
C2: (44.667,64.682,122.476)
C1': (43.768,65.761,124.478)
C3': (43.462,68.083,124.224)
O5': (40.792,67.884,123.408)
O4': (42.507,66.099,125.023)
C5': (41.001,67.977,124.823)
P: (39.357,67.565,122.805)
C4': (42.400,67.537,125.157)
C2': (44.574,67.056,124.365)
O2': (45.326,67.213,125.550)
N1: (43.549,65.065,123.200)
O4: (43.091,63.009,119.767)
O2: (45.809,64.921,122.841)
C6: (42.275,64.785,122.736)
C5: (42.049,64.121,121.599)
O3': (43.849,69.384,124.628)
Image (generated by PyMOL):