ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02594:02565

Extra

PDB:
ATOM 1 O3' G A2593 77.244 175.060 127.750 1.00 43.77 O
ATOM 2 P G A2594 76.286 173.782 127.910 1.00 43.67 P
ATOM 3 OP1 G A2594 76.174 173.456 129.351 1.00 45.08 O
ATOM 4 OP2 G A2594 76.767 172.748 126.963 1.00 45.91 O
ATOM 5 O5' G A2594 74.866 174.295 127.411 1.00 41.89 O
ATOM 6 C5' G A2594 74.282 175.486 127.957 1.00 43.01 C
ATOM 7 C4' G A2594 73.056 175.878 127.169 1.00 44.00 C
ATOM 8 O4' G A2594 73.419 176.172 125.796 1.00 46.91 O
ATOM 9 C3' G A2594 71.971 174.822 127.068 1.00 42.72 C
ATOM 10 O3' G A2594 71.200 174.878 128.265 1.00 44.11 O
ATOM 11 C2' G A2594 71.225 175.246 125.807 1.00 43.31 C
ATOM 12 O2' G A2594 70.318 176.301 126.038 1.00 42.50 O
ATOM 13 C1' G A2594 72.374 175.763 124.930 1.00 45.55 C
ATOM 14 N9 G A2594 72.923 174.789 123.987 1.00 46.88 N
ATOM 15 C8 G A2594 74.044 174.010 124.159 1.00 46.75 C
ATOM 16 N7 G A2594 74.293 173.236 123.140 1.00 47.17 N
ATOM 17 C5 G A2594 73.277 173.516 122.238 1.00 48.35 C
ATOM 18 C6 G A2594 73.020 172.982 120.948 1.00 48.05 C
ATOM 19 O6 G A2594 73.667 172.135 120.324 1.00 48.77 O
ATOM 20 N1 G A2594 71.880 173.539 120.382 1.00 48.51 N
ATOM 21 C2 G A2594 71.091 174.496 120.975 1.00 50.03 C
ATOM 22 N2 G A2594 70.042 174.923 120.265 1.00 51.15 N
ATOM 23 N3 G A2594 71.318 175.003 122.175 1.00 49.87 N
ATOM 24 C4 G A2594 72.421 174.472 122.746 1.00 48.70 C
ATOM 25 P U A2595 69.913 173.935 128.466 1.00 46.20 P
ATOM 26 OP1 U A2595 69.758 173.775 129.938 1.00 45.58 O
ATOM 27 OP2 U A2595 70.010 172.726 127.603 1.00 45.33 O
ATOM 28 O5' U A2595 68.704 174.843 127.971 1.00 42.36 O
TER

ATOM 1 O3' G B2564 69.007 171.605 117.351 1.00 41.41 O
ATOM 2 P U B2565 69.737 173.025 117.207 1.00 39.69 P
ATOM 3 OP1 U B2565 71.118 172.839 117.703 1.00 39.92 O
ATOM 4 OP2 U B2565 68.863 174.038 117.838 1.00 42.97 O
ATOM 5 O5' U B2565 69.760 173.322 115.642 1.00 41.34 O
ATOM 6 C5' U B2565 70.624 172.595 114.765 1.00 40.18 C
ATOM 7 C4' U B2565 70.397 173.010 113.331 1.00 41.28 C
ATOM 8 O4' U B2565 71.354 172.299 112.517 1.00 43.02 O
ATOM 9 C3' U B2565 69.011 172.713 112.763 1.00 43.33 C
ATOM 10 O3' U B2565 68.275 173.944 112.711 1.00 43.97 O
ATOM 11 C2' U B2565 69.288 172.263 111.328 1.00 43.95 C
ATOM 12 O2' U B2565 69.365 173.352 110.434 1.00 48.28 O
ATOM 13 C1' U B2565 70.701 171.692 111.430 1.00 43.89 C
ATOM 14 N1 U B2565 70.917 170.237 111.498 1.00 45.21 N
ATOM 15 C2 U B2565 71.662 169.672 110.467 1.00 46.91 C
ATOM 16 O2 U B2565 72.070 170.307 109.519 1.00 53.13 O
ATOM 17 N3 U B2565 71.914 168.338 110.582 1.00 43.87 N
ATOM 18 C4 U B2565 71.509 167.517 111.583 1.00 46.03 C
ATOM 19 O4 U B2565 71.876 166.346 111.560 1.00 49.27 O
ATOM 20 C5 U B2565 70.712 168.152 112.610 1.00 45.44 C
ATOM 21 C6 U B2565 70.448 169.462 112.529 1.00 41.98 C
ATOM 22 P A B2566 66.735 174.004 113.172 1.00 45.64 P
ATOM 23 OP1 A B2566 66.136 172.648 113.073 1.00 46.02 O
ATOM 24 OP2 A B2566 66.098 175.139 112.453 1.00 41.54 O
ATOM 25 O5' A B2566 66.816 174.408 114.712 1.00 45.38 O
TER

Atoms:
OP1: (76.174,173.456,129.351)
OP2: (76.767,172.748,126.963)
C3': (71.971,174.822,127.068)
C1': (72.374,175.763,124.930)
C5': (74.282,175.486,127.957)
O6: (73.667,172.135,120.324)
O4': (73.419,176.172,125.796)
C8: (74.044,174.010,124.159)
C2: (71.091,174.496,120.975)
C6: (73.020,172.982,120.948)
C5: (73.277,173.516,122.238)
C4: (72.421,174.472,122.746)
P: (76.286,173.782,127.910)
C4': (73.056,175.878,127.169)
C2': (71.225,175.246,125.807)
O2': (70.318,176.301,126.038)
N1: (71.880,173.539,120.382)
N2: (70.042,174.923,120.265)
N3: (71.318,175.003,122.175)
N7: (74.293,173.236,123.140)
N9: (72.923,174.789,123.987)
O5': (74.866,174.295,127.411)
O3': (71.200,174.878,128.265)
C4: (71.509,167.517,111.583)
N3: (71.914,168.338,110.582)
OP1: (71.118,172.839,117.703)
OP2: (68.863,174.038,117.838)
C2: (71.662,169.672,110.467)
C1': (70.701,171.692,111.430)
C3': (69.011,172.713,112.763)
O5': (69.760,173.322,115.642)
O4': (71.354,172.299,112.517)
C5': (70.624,172.595,114.765)
P: (69.737,173.025,117.207)
C4': (70.397,173.010,113.331)
C2': (69.288,172.263,111.328)
O2': (69.365,173.352,110.434)
N1: (70.917,170.237,111.498)
O4: (71.876,166.346,111.560)
O2: (72.070,170.307,109.519)
C6: (70.448,169.462,112.529)
C5: (70.712,168.152,112.610)
O3': (68.275,173.944,112.711)
Image (generated by PyMOL):
PyMOL image
show in jmol